RNA–Protein interactions for RNA: ENST00000304330.8

RPAP1-201, Transcript of RNA polymerase II associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAP1, Length 4,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-201ENST00000304330 FAM9BQ8IZU0 186 aa15.76■□□□□ 0.11
RPAP1-201ENST00000304330 TMC1Q8TDI8 760 aa15.76■□□□□ 0.11
RPAP1-201ENST00000304330 CANXP27824 592 aaKnown RBP15.74■□□□□ 0.11
RPAP1-201ENST00000304330 SETD5Q9C0A6 1442 aa15.74■□□□□ 0.11
RPAP1-201ENST00000304330 NEFMP07197 916 aa15.73■□□□□ 0.11
RPAP1-201ENST00000304330 CHMP7Q8WUX9 453 aaPredicted RBP15.71■□□□□ 0.11
RPAP1-201ENST00000304330 RRP7BPQ9NSQ0 103 aa15.71■□□□□ 0.1
RPAP1-201ENST00000304330 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.7■□□□□ 0.1
RPAP1-201ENST00000304330 ZBTB47Q9UFB7 747 aaPredicted RBP15.7■□□□□ 0.1
RPAP1-201ENST00000304330 CCER2I3L3R5 266 aa15.7■□□□□ 0.1
RPAP1-201ENST00000304330 ATAD2BQ9ULI0 1458 aa15.69■□□□□ 0.1
RPAP1-201ENST00000304330 ARHGAP35Q9NRY4 1499 aa15.69■□□□□ 0.1
RPAP1-201ENST00000304330 CCDC136Q96JN2 1154 aa15.68■□□□□ 0.1
RPAP1-201ENST00000304330 PLEKHD1A6NEE1 506 aa15.68■□□□□ 0.1
RPAP1-201ENST00000304330 FMN1Q68DA7 1419 aa15.67■□□□□ 0.1
RPAP1-201ENST00000304330 CFDP1Q9UEE9 299 aaPredicted RBP15.62■□□□□ 0.09
RPAP1-201ENST00000304330 RAPGEF2Q9Y4G8 1499 aa15.61■□□□□ 0.09
RPAP1-201ENST00000304330 SIN3AQ96ST3 1273 aa15.59■□□□□ 0.09
RPAP1-201ENST00000304330 WDR43Q15061 677 aaKnown RBP eCLIP15.59■□□□□ 0.09
RPAP1-201ENST00000304330 KANK4Q5T7N3 995 aaPredicted RBP15.59■□□□□ 0.09
RPAP1-201ENST00000304330 HIRIP3Q9BW71 556 aaPredicted RBP15.58■□□□□ 0.09
RPAP1-201ENST00000304330 RAB3GAP2Q9H2M9 1393 aa15.58■□□□□ 0.08
RPAP1-201ENST00000304330 CADPSQ9ULU8 1353 aa15.57■□□□□ 0.08
RPAP1-201ENST00000304330 CDCA8Q53HL2 280 aa15.57■□□□□ 0.08
RPAP1-201ENST00000304330 UPF2Q9HAU5 1272 aaKnown RBP15.57■□□□□ 0.08
RPAP1-201ENST00000304330 NPM1P06748 294 aaKnown RBP eCLIP15.57■□□□□ 0.08
RPAP1-201ENST00000304330 ERICH6BQ5W0A0 696 aa15.55■□□□□ 0.08
RPAP1-201ENST00000304330 SUPT16HQ9Y5B9 1047 aaKnown RBP15.55■□□□□ 0.08
RPAP1-201ENST00000304330 PDS5BQ9NTI5 1447 aa15.55■□□□□ 0.08
RPAP1-201ENST00000304330 KDM2AQ9Y2K7 1162 aa15.54■□□□□ 0.08
RPAP1-201ENST00000304330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.53■□□□□ 0.08
RPAP1-201ENST00000304330 PPP4R2Q9NY27 417 aa15.53■□□□□ 0.08
RPAP1-201ENST00000304330 NPM2Q86SE8 214 aaKnown RBP15.52■□□□□ 0.08
RPAP1-201ENST00000304330 SLC24A1O60721 1099 aa15.51■□□□□ 0.07
RPAP1-201ENST00000304330 DHX57Q6P158 1386 aaKnown RBP15.49■□□□□ 0.07
RPAP1-201ENST00000304330 RUSC2Q8N2Y8 1516 aa15.49■□□□□ 0.07
RPAP1-201ENST00000304330 CARD11Q9BXL7 1154 aa15.49■□□□□ 0.07
RPAP1-201ENST00000304330 ANP32EQ9BTT0 268 aa15.49■□□□□ 0.07
RPAP1-201ENST00000304330 KIF21BO75037 1637 aa15.48■□□□□ 0.07
RPAP1-201ENST00000304330 PPP1R15AO75807 674 aaPredicted RBP15.47■□□□□ 0.07
RPAP1-201ENST00000304330 DDRGK1Q96HY6 314 aa15.47■□□□□ 0.07
RPAP1-201ENST00000304330 CHGAP10645 457 aaKnown RBP15.46■□□□□ 0.07
RPAP1-201ENST00000304330 EIF4G1Q04637 1599 aaKnown RBP15.46■□□□□ 0.07
RPAP1-201ENST00000304330 ERICH3Q5RHP9 1530 aa15.42■□□□□ 0.06
RPAP1-201ENST00000304330 IRX6P78412 446 aaPredicted RBP15.42■□□□□ 0.06
RPAP1-201ENST00000304330 SALL2Q9Y467 1007 aaPredicted RBP15.42■□□□□ 0.06
RPAP1-201ENST00000304330 CARMIL2Q6F5E8 1435 aa15.41■□□□□ 0.06
RPAP1-201ENST00000304330 ESF1Q9H501 851 aaKnown RBP15.4■□□□□ 0.06
RPAP1-201ENST00000304330 KNSTRNQ9Y448 316 aa15.4■□□□□ 0.06
RPAP1-201ENST00000304330 NCAPD3P42695 1498 aa15.39■□□□□ 0.05
RPAP1-201ENST00000304330 HSPA5P11021 654 aaKnown RBP15.39■□□□□ 0.05
RPAP1-201ENST00000304330 STAG3Q9UJ98 1225 aa15.39■□□□□ 0.05
RPAP1-201ENST00000304330 ERCC6Q03468 1493 aa15.37■□□□□ 0.05
RPAP1-201ENST00000304330 CCDC18Q5T9S5 1454 aa15.37■□□□□ 0.05
RPAP1-201ENST00000304330 FHOD3Q2V2M9 1422 aa15.37■□□□□ 0.05
RPAP1-201ENST00000304330 MPHOSPH9Q99550 1183 aa15.36■□□□□ 0.05
RPAP1-201ENST00000304330 CFAP53Q96M91 514 aa15.35■□□□□ 0.05
RPAP1-201ENST00000304330 ANP32BQ92688 251 aaKnown RBP15.35■□□□□ 0.05
RPAP1-201ENST00000304330 ANKRD30AQ9BXX3 1397 aa15.35■□□□□ 0.05
RPAP1-201ENST00000304330 TDRD9Q8NDG6 1382 aaKnown RBP15.34■□□□□ 0.05
RPAP1-201ENST00000304330 RGL3Q3MIN7 710 aa15.34■□□□□ 0.05
RPAP1-201ENST00000304330 PPM1GO15355 546 aaPredicted RBP15.33■□□□□ 0.04
RPAP1-201ENST00000304330 BECN1Q14457 450 aa15.33■□□□□ 0.04
RPAP1-201ENST00000304330 TMF1P82094 1093 aa15.32■□□□□ 0.04
RPAP1-201ENST00000304330 FANCD2Q9BXW9 1451 aa15.32■□□□□ 0.04
RPAP1-201ENST00000304330 IGF1RP08069 1367 aa15.32■□□□□ 0.04
RPAP1-201ENST00000304330 EIF5BO60841 1220 aaKnown RBP15.32■□□□□ 0.04
RPAP1-201ENST00000304330 HSP90AA1P07900 732 aaKnown RBP15.32■□□□□ 0.04
RPAP1-201ENST00000304330 ROCK2O75116 1388 aaKnown RBP15.32■□□□□ 0.04
RPAP1-201ENST00000304330 RSPH4AQ5TD94 716 aa15.3■□□□□ 0.04
RPAP1-201ENST00000304330 KCNH8Q96L42 1107 aa15.3■□□□□ 0.04
RPAP1-201ENST00000304330 RALBP1Q15311 655 aa15.29■□□□□ 0.04
RPAP1-201ENST00000304330 NBR1Q14596 966 aa15.28■□□□□ 0.04
RPAP1-201ENST00000304330 PKD2Q13563 968 aa15.28■□□□□ 0.04
RPAP1-201ENST00000304330 KANK1Q14678 1352 aa15.27■□□□□ 0.04
RPAP1-201ENST00000304330 CUX1P39880 1505 aa15.27■□□□□ 0.03
RPAP1-201ENST00000304330 RRBP1Q9P2E9 1410 aaKnown RBP15.27■□□□□ 0.03
RPAP1-201ENST00000304330 DCAF11Q8TEB1 546 aa15.26■□□□□ 0.03
RPAP1-201ENST00000304330 FGD5Q6ZNL6 1462 aa15.26■□□□□ 0.03
RPAP1-201ENST00000304330 KTN1Q86UP2 1357 aaKnown RBP15.25■□□□□ 0.03
RPAP1-201ENST00000304330 MS4A1P11836 297 aa15.25■□□□□ 0.03
RPAP1-201ENST00000304330 MYH16Q9H6N6 1097 aa15.24■□□□□ 0.03
RPAP1-201ENST00000304330 ARID4BQ4LE39 1312 aaPredicted RBP15.24■□□□□ 0.03
RPAP1-201ENST00000304330 PRXQ9BXM0 1461 aa15.24■□□□□ 0.03
RPAP1-201ENST00000304330 SYNJ1O43426 1573 aa15.24■□□□□ 0.03
RPAP1-201ENST00000304330 NOP58Q9Y2X3 529 aaKnown RBP15.23■□□□□ 0.03
RPAP1-201ENST00000304330 TOP2BQ02880 1626 aa15.23■□□□□ 0.03
RPAP1-201ENST00000304330 LRRC9Q6ZRR7 1453 aa15.23■□□□□ 0.03
RPAP1-201ENST00000304330 L3MBTL2Q969R5 705 aa15.22■□□□□ 0.03
RPAP1-201ENST00000304330 RBM19Q9Y4C8 960 aaKnown RBP15.22■□□□□ 0.03
RPAP1-201ENST00000304330 CFTRP13569 1480 aa15.22■□□□□ 0.03
RPAP1-201ENST00000304330 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
RPAP1-201ENST00000304330 NUP155O75694 1391 aa15.21■□□□□ 0.03
RPAP1-201ENST00000304330 CHMP4BQ9H444 224 aaKnown RBP15.21■□□□□ 0.03
RPAP1-201ENST00000304330 NUDCQ9Y266 331 aa15.21■□□□□ 0.02
RPAP1-201ENST00000304330 CASKIN1Q8WXD9 1431 aa15.2■□□□□ 0.02
RPAP1-201ENST00000304330 FGD6Q6ZV73 1430 aa15.2■□□□□ 0.02
RPAP1-201ENST00000304330 PDE3BQ13370 1112 aa15.2■□□□□ 0.02
RPAP1-201ENST00000304330 UACAQ9BZF9 1416 aa15.19■□□□□ 0.02
RPAP1-201ENST00000304330 PHLDB1Q86UU1 1377 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms