RNA–Protein interactions for RNA: ENST00000303460.4

HOXC10-201, Transcript of homeobox C10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC10, Length 1,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10-201ENST00000303460 VPS8Q8N3P4 1428 aa29.28■■■□□ 2.28
HOXC10-201ENST00000303460 MAGI1Q96QZ7 1491 aaPredicted RBP29.24■■■□□ 2.27
HOXC10-201ENST00000303460 TRIM26Q12899 539 aaPredicted RBP29.17■■■□□ 2.26
HOXC10-201ENST00000303460 PPARGC1BQ86YN6 1023 aaKnown RBP29.17■■■□□ 2.26
HOXC10-201ENST00000303460 GRIN2AQ12879 1464 aa29.16■■■□□ 2.26
HOXC10-201ENST00000303460 SYNJ2O15056 1496 aa29.15■■■□□ 2.26
HOXC10-201ENST00000303460 EFCAB5A4FU69 1503 aa29.1■■■□□ 2.25
HOXC10-201ENST00000303460 HRCP23327 699 aa29.1■■■□□ 2.25
HOXC10-201ENST00000303460 CHMP7Q8WUX9 453 aaPredicted RBP29.07■■■□□ 2.24
HOXC10-201ENST00000303460 IQGAP2Q13576 1575 aa29.07■■■□□ 2.24
HOXC10-201ENST00000303460 P3H3Q8IVL6 736 aa29.05■■■□□ 2.24
HOXC10-201ENST00000303460 SAMD9Q5K651 1589 aa29.04■■■□□ 2.24
HOXC10-201ENST00000303460 FHOD3Q2V2M9 1422 aa29.02■■■□□ 2.24
HOXC10-201ENST00000303460 FBLN2P98095 1184 aa29.02■■■□□ 2.24
HOXC10-201ENST00000303460 CEP170Q5SW79 1584 aa29.01■■■□□ 2.23
HOXC10-201ENST00000303460 KIAA0586Q9BVV6 1533 aa29■■■□□ 2.23
HOXC10-201ENST00000303460 NUP160Q12769 1436 aa28.94■■■□□ 2.22
HOXC10-201ENST00000303460 TTBK1Q5TCY1 1321 aaPredicted RBP28.94■■■□□ 2.22
HOXC10-201ENST00000303460 UGGT2Q9NYU1 1516 aa28.92■■■□□ 2.22
HOXC10-201ENST00000303460 APLP2Q06481 763 aa28.9■■■□□ 2.22
HOXC10-201ENST00000303460 CHD1O14646 1710 aa28.89■■■□□ 2.22
HOXC10-201ENST00000303460 PCF11O94913 1555 aaKnown RBP28.88■■■□□ 2.21
HOXC10-201ENST00000303460 FMN1Q68DA7 1419 aa28.83■■■□□ 2.21
HOXC10-201ENST00000303460 DISP1Q96F81 1524 aa28.81■■■□□ 2.2
HOXC10-201ENST00000303460 CASKIN1Q8WXD9 1431 aa28.8■■■□□ 2.2
HOXC10-201ENST00000303460 FYCO1Q9BQS8 1478 aa28.79■■■□□ 2.2
HOXC10-201ENST00000303460 KIAA0556O60303 1618 aa28.79■■■□□ 2.2
HOXC10-201ENST00000303460 KANK4Q5T7N3 995 aaPredicted RBP28.77■■■□□ 2.2
HOXC10-201ENST00000303460 TIAM1Q13009 1591 aa28.75■■■□□ 2.19
HOXC10-201ENST00000303460 MAP3K1Q13233 1512 aa28.74■■■□□ 2.19
HOXC10-201ENST00000303460 JPH4Q96JJ6 628 aa28.71■■■□□ 2.19
HOXC10-201ENST00000303460 CFAP43Q8NDM7 1665 aa28.7■■■□□ 2.19
HOXC10-201ENST00000303460 ATP1B4Q9UN42 357 aaPredicted RBP28.7■■■□□ 2.18
HOXC10-201ENST00000303460 LRRIQ1Q96JM4 1722 aa28.65■■■□□ 2.18
HOXC10-201ENST00000303460 LRRC9Q6ZRR7 1453 aa28.61■■■□□ 2.17
HOXC10-201ENST00000303460 CARMIL2Q6F5E8 1435 aa28.61■■■□□ 2.17
HOXC10-201ENST00000303460 SHROOM2Q13796 1616 aa28.57■■■□□ 2.16
HOXC10-201ENST00000303460 HECW1Q76N89 1606 aa28.56■■■□□ 2.16
HOXC10-201ENST00000303460 PRG4Q92954 1404 aaPredicted RBP28.55■■■□□ 2.16
HOXC10-201ENST00000303460 CLASP1Q7Z460 1538 aa28.55■■■□□ 2.16
HOXC10-201ENST00000303460 ZEB1P37275 1124 aaPredicted RBP28.5■■■□□ 2.15
HOXC10-201ENST00000303460 RAPGEF6Q8TEU7 1601 aa28.49■■■□□ 2.15
HOXC10-201ENST00000303460 CCDC18Q5T9S5 1454 aa28.48■■■□□ 2.15
HOXC10-201ENST00000303460 EPRSP07814 1512 aaKnown RBP28.47■■■□□ 2.15
HOXC10-201ENST00000303460 PLB1Q6P1J6 1458 aa28.44■■■□□ 2.14
HOXC10-201ENST00000303460 NUP153P49790 1475 aaKnown RBP28.44■■■□□ 2.14
HOXC10-201ENST00000303460 CDK13Q14004 1512 aaKnown RBP28.44■■■□□ 2.14
HOXC10-201ENST00000303460 ERCC6L2Q5T890 1561 aa28.42■■■□□ 2.14
HOXC10-201ENST00000303460 MAGI3Q5TCQ9 1506 aa28.41■■■□□ 2.14
HOXC10-201ENST00000303460 MTUS2Q5JR59 1369 aa28.39■■■□□ 2.14
HOXC10-201ENST00000303460 ARID3CA6NKF2 412 aa28.39■■■□□ 2.13
HOXC10-201ENST00000303460 RRBP1Q9P2E9 1410 aaKnown RBP28.39■■■□□ 2.13
HOXC10-201ENST00000303460 PHLDB1Q86UU1 1377 aa28.38■■■□□ 2.13
HOXC10-201ENST00000303460 ABCA8O94911 1581 aa28.37■■■□□ 2.13
HOXC10-201ENST00000303460 EHBP1L1Q8N3D4 1523 aa28.36■■■□□ 2.13
HOXC10-201ENST00000303460 PTPRGP23470 1445 aa28.35■■■□□ 2.13
HOXC10-201ENST00000303460 CCNB3Q8WWL7 1395 aa28.29■■■□□ 2.12
HOXC10-201ENST00000303460 SUPT6HQ7KZ85 1726 aaKnown RBP28.28■■■□□ 2.12
HOXC10-201ENST00000303460 NCOA2Q15596 1464 aa28.27■■■□□ 2.12
HOXC10-201ENST00000303460 HNRNPUL2Q1KMD3 747 aaKnown RBP28.26■■■□□ 2.11
HOXC10-201ENST00000303460 OSCARQ8IYS5 282 aa28.24■■■□□ 2.11
HOXC10-201ENST00000303460 ARHGEF11O15085 1522 aa28.24■■■□□ 2.11
HOXC10-201ENST00000303460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.2■■■□□ 2.11
HOXC10-201ENST00000303460 ATP10BO94823 1461 aa28.19■■■□□ 2.1
HOXC10-201ENST00000303460 UACAQ9BZF9 1416 aa28.19■■■□□ 2.1
HOXC10-201ENST00000303460 FGD6Q6ZV73 1430 aa28.15■■■□□ 2.1
HOXC10-201ENST00000303460 CDK11AQ9UQ88 783 aaPredicted RBP28.15■■■□□ 2.1
HOXC10-201ENST00000303460 MYOM3Q5VTT5 1437 aa28.14■■■□□ 2.1
HOXC10-201ENST00000303460 TROQ12816 1431 aaPredicted RBP28.13■■■□□ 2.09
HOXC10-201ENST00000303460 ABCC2Q92887 1545 aa28.11■■■□□ 2.09
HOXC10-201ENST00000303460 FAM50AQ14320 339 aaKnown RBP28.09■■■□□ 2.09
HOXC10-201ENST00000303460 ADCY10Q96PN6 1610 aa28.06■■■□□ 2.08
HOXC10-201ENST00000303460 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.06■■■□□ 2.08
HOXC10-201ENST00000303460 ITGAEP38570 1179 aa28.05■■■□□ 2.08
HOXC10-201ENST00000303460 KIF14Q15058 1648 aa28.05■■■□□ 2.08
HOXC10-201ENST00000303460 UHRF1BP1LA0JNW5 1464 aa28.03■■■□□ 2.08
HOXC10-201ENST00000303460 PLEKHD1A6NEE1 506 aa28.02■■■□□ 2.08
HOXC10-201ENST00000303460 PTPN23Q9H3S7 1636 aa28.01■■■□□ 2.07
HOXC10-201ENST00000303460 MIA2Q96PC5 1412 aa27.97■■■□□ 2.07
HOXC10-201ENST00000303460 TCOF1Q13428 1488 aaKnown RBP27.96■■■□□ 2.07
HOXC10-201ENST00000303460 ZCCHC11Q5TAX3 1644 aaKnown RBP27.95■■■□□ 2.06
HOXC10-201ENST00000303460 KDM5BQ9UGL1 1544 aa27.94■■■□□ 2.06
HOXC10-201ENST00000303460 ABCC10Q5T3U5 1492 aa27.91■■■□□ 2.06
HOXC10-201ENST00000303460 CCER1Q8TC90 406 aaPredicted RBP27.9■■■□□ 2.06
HOXC10-201ENST00000303460 GPATCH8Q9UKJ3 1502 aaKnown RBP27.9■■■□□ 2.06
HOXC10-201ENST00000303460 ITSN2Q9NZM3 1697 aa27.89■■■□□ 2.05
HOXC10-201ENST00000303460 PTPRKQ15262 1439 aa27.87■■■□□ 2.05
HOXC10-201ENST00000303460 CDC42BPAQ5VT25 1732 aa27.85■■■□□ 2.05
HOXC10-201ENST00000303460 ZNF644Q9H582 1327 aaPredicted RBP27.81■■■□□ 2.04
HOXC10-201ENST00000303460 CFDP1Q9UEE9 299 aaPredicted RBP27.8■■■□□ 2.04
HOXC10-201ENST00000303460 SETD5Q9C0A6 1442 aa27.78■■■□□ 2.04
HOXC10-201ENST00000303460 RAB3GAP2Q9H2M9 1393 aa27.77■■■□□ 2.04
HOXC10-201ENST00000303460 TTC37Q6PGP7 1564 aa27.77■■■□□ 2.04
HOXC10-201ENST00000303460 CAMSAP2Q08AD1 1489 aa27.77■■■□□ 2.04
HOXC10-201ENST00000303460 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.77■■■□□ 2.04
HOXC10-201ENST00000303460 DNMT1P26358 1616 aaKnown RBP27.73■■■□□ 2.03
HOXC10-201ENST00000303460 PREX2Q70Z35 1606 aa27.72■■■□□ 2.03
HOXC10-201ENST00000303460 KCNH8Q96L42 1107 aa27.72■■■□□ 2.03
HOXC10-201ENST00000303460 CDC42BPBQ9Y5S2 1711 aa27.71■■■□□ 2.03
HOXC10-201ENST00000303460 ZNF777Q9ULD5 760 aaPredicted RBP27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms