RNA–Protein interactions for RNA: ENST00000302328.7

SCN11A-201, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN11A, Length 6,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-201ENST00000302328 CLIP1P30622 1438 aa11.69□□□□□ -0.54
SCN11A-201ENST00000302328 CEP164Q9UPV0 1460 aa11.69□□□□□ -0.54
SCN11A-201ENST00000302328 SOGA1O94964 1423 aa11.68□□□□□ -0.54
SCN11A-201ENST00000302328 EEA1Q15075 1411 aa11.68□□□□□ -0.54
SCN11A-201ENST00000302328 RRP7BPQ9NSQ0 103 aa11.67□□□□□ -0.54
SCN11A-201ENST00000302328 NPM2Q86SE8 214 aaKnown RBP11.66□□□□□ -0.54
SCN11A-201ENST00000302328 HDGFP51858 240 aaKnown RBP11.64□□□□□ -0.55
SCN11A-201ENST00000302328 KANK1Q14678 1352 aa11.63□□□□□ -0.55
SCN11A-201ENST00000302328 ZNF316A6NFI3 1004 aaPredicted RBP11.63□□□□□ -0.55
SCN11A-201ENST00000302328 MYT1Q01538 1121 aa11.63□□□□□ -0.55
SCN11A-201ENST00000302328 CARMIL1Q5VZK9 1371 aa11.63□□□□□ -0.55
SCN11A-201ENST00000302328 LMOD2Q6P5Q4 547 aa11.62□□□□□ -0.55
SCN11A-201ENST00000302328 DIEXFQ68CQ4 756 aaKnown RBP11.61□□□□□ -0.55
SCN11A-201ENST00000302328 OSCARQ8IYS5 282 aa11.61□□□□□ -0.55
SCN11A-201ENST00000302328 CCNB3Q8WWL7 1395 aa11.6□□□□□ -0.55
SCN11A-201ENST00000302328 CCDC88BA6NC98 1476 aa11.6□□□□□ -0.55
SCN11A-201ENST00000302328 MROH2BQ7Z745 1585 aa11.59□□□□□ -0.55
SCN11A-201ENST00000302328 CADPSQ9ULU8 1353 aa11.59□□□□□ -0.55
SCN11A-201ENST00000302328 ACIN1Q9UKV3 1341 aaKnown RBP11.58□□□□□ -0.56
SCN11A-201ENST00000302328 TDRD9Q8NDG6 1382 aaKnown RBP11.58□□□□□ -0.56
SCN11A-201ENST00000302328 RGL3Q3MIN7 710 aa11.58□□□□□ -0.56
SCN11A-201ENST00000302328 TMC1Q8TDI8 760 aa11.57□□□□□ -0.56
SCN11A-201ENST00000302328 CYB5RLQ6IPT4 315 aa11.57□□□□□ -0.56
SCN11A-201ENST00000302328 POGKQ9P215 609 aa11.57□□□□□ -0.56
SCN11A-201ENST00000302328 WIZO95785 1651 aa11.56□□□□□ -0.56
SCN11A-201ENST00000302328 MYO15BQ96JP2 1530 aa11.56□□□□□ -0.56
SCN11A-201ENST00000302328 TOP2AP11388 1531 aaKnown RBP11.55□□□□□ -0.56
SCN11A-201ENST00000302328 SMARCA4P51532 1647 aa11.54□□□□□ -0.56
SCN11A-201ENST00000302328 WDR43Q15061 677 aaKnown RBP eCLIP11.52□□□□□ -0.56
SCN11A-201ENST00000302328 FANCD2Q9BXW9 1451 aa11.52□□□□□ -0.56
SCN11A-201ENST00000302328 FHAD1B1AJZ9 1412 aa11.52□□□□□ -0.57
SCN11A-201ENST00000302328 GGT6Q6P531 493 aa11.52□□□□□ -0.57
SCN11A-201ENST00000302328 ATAD2BQ9ULI0 1458 aa11.51□□□□□ -0.57
SCN11A-201ENST00000302328 ARXQ96QS3 562 aa11.51□□□□□ -0.57
SCN11A-201ENST00000302328 ABCC8Q09428 1581 aa11.51□□□□□ -0.57
SCN11A-201ENST00000302328 CEP162Q5TB80 1403 aa11.5□□□□□ -0.57
SCN11A-201ENST00000302328 NPHP1O15259 732 aa11.49□□□□□ -0.57
SCN11A-201ENST00000302328 EFCAB2Q5VUJ9 269 aa11.46□□□□□ -0.57
SCN11A-201ENST00000302328 PPM1GO15355 546 aaPredicted RBP11.45□□□□□ -0.58
SCN11A-201ENST00000302328 CDCA8Q53HL2 280 aa11.45□□□□□ -0.58
SCN11A-201ENST00000302328 EID1Q9Y6B2 187 aa11.43□□□□□ -0.58
SCN11A-201ENST00000302328 JPH4Q96JJ6 628 aa11.43□□□□□ -0.58
SCN11A-201ENST00000302328 TNIKQ9UKE5 1360 aa11.42□□□□□ -0.58
SCN11A-201ENST00000302328 CC2D2AQ9P2K1 1620 aa11.42□□□□□ -0.58
SCN11A-201ENST00000302328 SALL2Q9Y467 1007 aaPredicted RBP11.41□□□□□ -0.58
SCN11A-201ENST00000302328 CFAP53Q96M91 514 aa11.41□□□□□ -0.58
SCN11A-201ENST00000302328 CCDC9Q9Y3X0 531 aaKnown RBP11.4□□□□□ -0.58
SCN11A-201ENST00000302328 FAM9BQ8IZU0 186 aa11.39□□□□□ -0.59
SCN11A-201ENST00000302328 FAM69CQ0P6D2 419 aa11.38□□□□□ -0.59
SCN11A-201ENST00000302328 EIF4G2P78344 907 aaKnown RBP eCLIP11.37□□□□□ -0.59
SCN11A-201ENST00000302328 CARD11Q9BXL7 1154 aa11.37□□□□□ -0.59
SCN11A-201ENST00000302328 FMN1Q68DA7 1419 aa11.37□□□□□ -0.59
SCN11A-201ENST00000302328 ARHGAP35Q9NRY4 1499 aa11.36□□□□□ -0.59
SCN11A-201ENST00000302328 PAK3O75914 559 aaPredicted RBP11.36□□□□□ -0.59
SCN11A-201ENST00000302328 RAPGEF2Q9Y4G8 1499 aa11.36□□□□□ -0.59
SCN11A-201ENST00000302328 KNSTRNQ9Y448 316 aa11.36□□□□□ -0.59
SCN11A-201ENST00000302328 STK26Q9P289 416 aa11.36□□□□□ -0.59
SCN11A-201ENST00000302328 SRPK2P78362 688 aaKnown RBP11.35□□□□□ -0.59
SCN11A-201ENST00000302328 PTPRGP23470 1445 aa11.35□□□□□ -0.59
SCN11A-201ENST00000302328 DDX10Q13206 875 aaKnown RBP11.35□□□□□ -0.59
SCN11A-201ENST00000302328 MYH16Q9H6N6 1097 aa11.34□□□□□ -0.59
SCN11A-201ENST00000302328 SPAG9O60271 1321 aaKnown RBP11.34□□□□□ -0.59
SCN11A-201ENST00000302328 WASHC2CQ9Y4E1 1318 aa11.34□□□□□ -0.59
SCN11A-201ENST00000302328 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.34□□□□□ -0.59
SCN11A-201ENST00000302328 SAFB2Q14151 953 aaKnown RBP eCLIP11.33□□□□□ -0.6
SCN11A-201ENST00000302328 KIF3BO15066 747 aa11.33□□□□□ -0.6
SCN11A-201ENST00000302328 MEX3CQ5U5Q3 659 aaKnown RBP11.33□□□□□ -0.6
SCN11A-201ENST00000302328 SOX12O15370 315 aa11.33□□□□□ -0.6
SCN11A-201ENST00000302328 HNRNPMP52272 730 aaKnown RBP eCLIP11.32□□□□□ -0.6
SCN11A-201ENST00000302328 CSB-PGBD3P0DP91 1061 aa11.32□□□□□ -0.6
SCN11A-201ENST00000302328 MRC2Q9UBG0 1479 aa11.32□□□□□ -0.6
SCN11A-201ENST00000302328 PRDM2Q13029 1718 aa11.31□□□□□ -0.6
SCN11A-201ENST00000302328 GAPVD1Q14C86 1478 aa11.31□□□□□ -0.6
SCN11A-201ENST00000302328 NUDCQ9Y266 331 aa11.3□□□□□ -0.6
SCN11A-201ENST00000302328 CCDC18Q5T9S5 1454 aa11.3□□□□□ -0.6
SCN11A-201ENST00000302328 DCAF11Q8TEB1 546 aa11.29□□□□□ -0.6
SCN11A-201ENST00000302328 MAPK8IP3Q9UPT6 1336 aa11.29□□□□□ -0.6
SCN11A-201ENST00000302328 LAS1LQ9Y4W2 734 aaKnown RBP11.29□□□□□ -0.6
SCN11A-201ENST00000302328 ANKRD30AQ9BXX3 1397 aa11.28□□□□□ -0.6
SCN11A-201ENST00000302328 RTL5Q5HYW3 569 aaPredicted RBP11.28□□□□□ -0.6
SCN11A-201ENST00000302328 TNNT2P45379 298 aaPredicted RBP11.27□□□□□ -0.6
SCN11A-201ENST00000302328 HIRIP3Q9BW71 556 aaPredicted RBP11.27□□□□□ -0.61
SCN11A-201ENST00000302328 HNRNPUQ00839 825 aaKnown RBP eCLIP11.27□□□□□ -0.61
SCN11A-201ENST00000302328 HDGFL2Q7Z4V5 671 aaPredicted RBP11.27□□□□□ -0.61
SCN11A-201ENST00000302328 PNNQ9H307 717 aaKnown RBP11.27□□□□□ -0.61
SCN11A-201ENST00000302328 FGD5Q6ZNL6 1462 aa11.26□□□□□ -0.61
SCN11A-201ENST00000302328 MRS2Q9HD23 443 aa11.26□□□□□ -0.61
SCN11A-201ENST00000302328 NCAPD3P42695 1498 aa11.25□□□□□ -0.61
SCN11A-201ENST00000302328 FHOD3Q2V2M9 1422 aa11.25□□□□□ -0.61
SCN11A-201ENST00000302328 RSPH4AQ5TD94 716 aa11.25□□□□□ -0.61
SCN11A-201ENST00000302328 TMF1P82094 1093 aa11.25□□□□□ -0.61
SCN11A-201ENST00000302328 AQRO60306 1485 aaKnown RBP eCLIP11.25□□□□□ -0.61
SCN11A-201ENST00000302328 RAD54L2Q9Y4B4 1467 aa11.25□□□□□ -0.61
SCN11A-201ENST00000302328 NUTM2DQ5VT03 806 aaPredicted RBP11.24□□□□□ -0.61
SCN11A-201ENST00000302328 HSP90AA1P07900 732 aaKnown RBP11.23□□□□□ -0.61
SCN11A-201ENST00000302328 U2SURPO15042 1029 aaKnown RBP11.22□□□□□ -0.61
SCN11A-201ENST00000302328 PKD2Q13563 968 aa11.22□□□□□ -0.61
SCN11A-201ENST00000302328 UPF2Q9HAU5 1272 aaKnown RBP11.22□□□□□ -0.61
SCN11A-201ENST00000302328 TMX4Q9H1E5 349 aaPredicted RBP11.21□□□□□ -0.61
SCN11A-201ENST00000302328 PHF23Q9BUL5 403 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms