RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 ADCY10Q96PN6 1610 aa12.05□□□□□ -0.48
ITGB1-201ENST00000302278 AEBP2Q6ZN18 517 aaPredicted RBP12.04□□□□□ -0.48
ITGB1-201ENST00000302278 CUL7Q14999 1698 aa12□□□□□ -0.49
ITGB1-201ENST00000302278 PRG4Q92954 1404 aaPredicted RBP11.99□□□□□ -0.49
ITGB1-201ENST00000302278 PPRC1Q5VV67 1664 aaKnown RBP11.98□□□□□ -0.49
ITGB1-201ENST00000302278 GLI2P10070 1586 aa11.97□□□□□ -0.49
ITGB1-201ENST00000302278 KDM6BO15054 1643 aa11.96□□□□□ -0.49
ITGB1-201ENST00000302278 KIAA0586Q9BVV6 1533 aa11.93□□□□□ -0.5
ITGB1-201ENST00000302278 UHRF1BP1LA0JNW5 1464 aa11.89□□□□□ -0.51
ITGB1-201ENST00000302278 MAP3K4Q9Y6R4 1608 aa11.89□□□□□ -0.51
ITGB1-201ENST00000302278 JPH4Q96JJ6 628 aa11.89□□□□□ -0.51
ITGB1-201ENST00000302278 TSPOAP1O95153 1857 aa11.86□□□□□ -0.51
ITGB1-201ENST00000302278 ABCC2Q92887 1545 aa11.85□□□□□ -0.51
ITGB1-201ENST00000302278 KDM4FA0A1W2PPD8 638 aa11.82□□□□□ -0.52
ITGB1-201ENST00000302278 PLB1Q6P1J6 1458 aa11.81□□□□□ -0.52
ITGB1-201ENST00000302278 IGF1RP08069 1367 aa11.81□□□□□ -0.52
ITGB1-201ENST00000302278 FAM69CQ0P6D2 419 aa11.81□□□□□ -0.52
ITGB1-201ENST00000302278 IQGAP2Q13576 1575 aa11.8□□□□□ -0.52
ITGB1-201ENST00000302278 KDM5BQ9UGL1 1544 aa11.79□□□□□ -0.52
ITGB1-201ENST00000302278 KIF27Q86VH2 1401 aa11.78□□□□□ -0.52
ITGB1-201ENST00000302278 UGGT2Q9NYU1 1516 aa11.78□□□□□ -0.52
ITGB1-201ENST00000302278 ZCCHC11Q5TAX3 1644 aaKnown RBP11.78□□□□□ -0.52
ITGB1-201ENST00000302278 DISP1Q96F81 1524 aa11.77□□□□□ -0.53
ITGB1-201ENST00000302278 TNIKQ9UKE5 1360 aa11.76□□□□□ -0.53
ITGB1-201ENST00000302278 NPM1P06748 294 aaKnown RBP eCLIP11.75□□□□□ -0.53
ITGB1-201ENST00000302278 ASXL2Q76L83 1435 aa11.75□□□□□ -0.53
ITGB1-201ENST00000302278 ADGRL1O94910 1474 aa11.75□□□□□ -0.53
ITGB1-201ENST00000302278 EPRSP07814 1512 aaKnown RBP11.75□□□□□ -0.53
ITGB1-201ENST00000302278 CFAP43Q8NDM7 1665 aa11.75□□□□□ -0.53
ITGB1-201ENST00000302278 KIAA0556O60303 1618 aa11.74□□□□□ -0.53
ITGB1-201ENST00000302278 PTPRGP23470 1445 aa11.74□□□□□ -0.53
ITGB1-201ENST00000302278 CARMIL2Q6F5E8 1435 aa11.74□□□□□ -0.53
ITGB1-201ENST00000302278 TEX14Q8IWB6 1497 aa11.73□□□□□ -0.53
ITGB1-201ENST00000302278 CTTNBP2Q8WZ74 1663 aa11.72□□□□□ -0.53
ITGB1-201ENST00000302278 UACAQ9BZF9 1416 aa11.72□□□□□ -0.53
ITGB1-201ENST00000302278 HECW2Q9P2P5 1572 aa11.71□□□□□ -0.53
ITGB1-201ENST00000302278 COL17A1Q9UMD9 1497 aaPredicted RBP11.7□□□□□ -0.54
ITGB1-201ENST00000302278 MAGI3Q5TCQ9 1506 aa11.69□□□□□ -0.54
ITGB1-201ENST00000302278 CARMIL1Q5VZK9 1371 aa11.68□□□□□ -0.54
ITGB1-201ENST00000302278 ABCA8O94911 1581 aa11.67□□□□□ -0.54
ITGB1-201ENST00000302278 WDR7Q9Y4E6 1490 aa11.65□□□□□ -0.54
ITGB1-201ENST00000302278 RAPGEF2Q9Y4G8 1499 aa11.62□□□□□ -0.55
ITGB1-201ENST00000302278 ILDR1Q86SU0 546 aaPredicted RBP11.62□□□□□ -0.55
ITGB1-201ENST00000302278 ADAMTSL3P82987 1691 aa11.62□□□□□ -0.55
ITGB1-201ENST00000302278 ARAP3Q8WWN8 1544 aa11.62□□□□□ -0.55
ITGB1-201ENST00000302278 SUPT5HO00267 1087 aaKnown RBP11.6□□□□□ -0.55
ITGB1-201ENST00000302278 ABCA9Q8IUA7 1624 aa11.59□□□□□ -0.55
ITGB1-201ENST00000302278 KIF21BO75037 1637 aa11.59□□□□□ -0.55
ITGB1-201ENST00000302278 GOLGA3Q08378 1498 aa11.57□□□□□ -0.56
ITGB1-201ENST00000302278 BCORL1Q5H9F3 1711 aa11.54□□□□□ -0.56
ITGB1-201ENST00000302278 FRMPD1Q5SYB0 1578 aa11.54□□□□□ -0.56
ITGB1-201ENST00000302278 PHLDB1Q86UU1 1377 aa11.54□□□□□ -0.56
ITGB1-201ENST00000302278 SAMD9Q5K651 1589 aa11.53□□□□□ -0.56
ITGB1-201ENST00000302278 CD109Q6YHK3 1445 aa11.51□□□□□ -0.57
ITGB1-201ENST00000302278 PRXQ9BXM0 1461 aa11.51□□□□□ -0.57
ITGB1-201ENST00000302278 NEO1Q92859 1461 aa11.49□□□□□ -0.57
ITGB1-201ENST00000302278 RICTORQ6R327 1708 aa11.49□□□□□ -0.57
ITGB1-201ENST00000302278 CFAP74Q9C0B2 1584 aa11.47□□□□□ -0.57
ITGB1-201ENST00000302278 ARHGEF40Q8TER5 1519 aa11.47□□□□□ -0.57
ITGB1-201ENST00000302278 PTPRMP28827 1452 aa11.46□□□□□ -0.58
ITGB1-201ENST00000302278 RAPGEF6Q8TEU7 1601 aa11.46□□□□□ -0.58
ITGB1-201ENST00000302278 ZMYM4Q5VZL5 1548 aa11.46□□□□□ -0.58
ITGB1-201ENST00000302278 PCF11O94913 1555 aaKnown RBP11.45□□□□□ -0.58
ITGB1-201ENST00000302278 MADDQ8WXG6 1647 aa11.44□□□□□ -0.58
ITGB1-201ENST00000302278 ATP10BO94823 1461 aa11.44□□□□□ -0.58
ITGB1-201ENST00000302278 LMTK3Q96Q04 1460 aa11.42□□□□□ -0.58
ITGB1-201ENST00000302278 FBXO41Q8TF61 875 aa11.41□□□□□ -0.58
ITGB1-201ENST00000302278 SIGLEC1Q9BZZ2 1709 aa11.4□□□□□ -0.58
ITGB1-201ENST00000302278 TTC37Q6PGP7 1564 aa11.39□□□□□ -0.59
ITGB1-201ENST00000302278 RIMS1Q86UR5 1692 aaKnown RBP11.39□□□□□ -0.59
ITGB1-201ENST00000302278 FHOD3Q2V2M9 1422 aa11.37□□□□□ -0.59
ITGB1-201ENST00000302278 NUP153P49790 1475 aaKnown RBP11.36□□□□□ -0.59
ITGB1-201ENST00000302278 MAGI2Q86UL8 1455 aa11.35□□□□□ -0.59
ITGB1-201ENST00000302278 EFCAB5A4FU69 1503 aa11.35□□□□□ -0.59
ITGB1-201ENST00000302278 FER1L4A9Z1Z3 1794 aa11.35□□□□□ -0.59
ITGB1-201ENST00000302278 PREX1Q8TCU6 1659 aa11.34□□□□□ -0.59
ITGB1-201ENST00000302278 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.33□□□□□ -0.61e-9■■■□□ 15
ITGB1-201ENST00000302278 TTBK1Q5TCY1 1321 aaPredicted RBP11.33□□□□□ -0.6
ITGB1-201ENST00000302278 ARHGEF12Q9NZN5 1544 aa11.32□□□□□ -0.6
ITGB1-201ENST00000302278 FANCAO15360 1455 aa11.31□□□□□ -0.6
ITGB1-201ENST00000302278 REREQ9P2R6 1566 aa11.31□□□□□ -0.6
ITGB1-201ENST00000302278 ZFYVE16Q7Z3T8 1539 aa11.31□□□□□ -0.6
ITGB1-201ENST00000302278 DENND4BO75064 1496 aaPredicted RBP11.3□□□□□ -0.6
ITGB1-201ENST00000302278 HECW1Q76N89 1606 aa11.28□□□□□ -0.6
ITGB1-201ENST00000302278 STRCQ7RTU9 1775 aa11.28□□□□□ -0.6
ITGB1-201ENST00000302278 AKNAQ7Z591 1439 aa11.28□□□□□ -0.6
ITGB1-201ENST00000302278 MYO5CQ9NQX4 1742 aa11.27□□□□□ -0.6
ITGB1-201ENST00000302278 KDM5CP41229 1560 aa11.27□□□□□ -0.61
ITGB1-201ENST00000302278 KCNH8Q96L42 1107 aa11.26□□□□□ -0.61
ITGB1-201ENST00000302278 EEA1Q15075 1411 aa11.26□□□□□ -0.61
ITGB1-201ENST00000302278 POGZQ7Z3K3 1410 aa11.25□□□□□ -0.61
ITGB1-201ENST00000302278 RAPGEF3O95398 923 aa11.22□□□□□ -0.61
ITGB1-201ENST00000302278 IQSEC2Q5JU85 1478 aa11.22□□□□□ -0.61
ITGB1-201ENST00000302278 PLCH2O75038 1416 aa11.21□□□□□ -0.61
ITGB1-201ENST00000302278 C9orf84Q5VXU9 1444 aa11.21□□□□□ -0.62
ITGB1-201ENST00000302278 YEATS2Q9ULM3 1422 aa11.2□□□□□ -0.62
ITGB1-201ENST00000302278 LRRIQ1Q96JM4 1722 aa11.2□□□□□ -0.62
ITGB1-201ENST00000302278 MROH2AA6NES4 1674 aa11.2□□□□□ -0.62
ITGB1-201ENST00000302278 FAM9AQ8IZU1 332 aaPredicted RBP11.2□□□□□ -0.62
ITGB1-201ENST00000302278 ATP10AO60312 1499 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms