RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 CARMIL1Q5VZK9 1371 aa31.32■■■□□ 2.6
TMEM88-201ENST00000301599 CUL7Q14999 1698 aa31.31■■■□□ 2.6
TMEM88-201ENST00000301599 KIAA0586Q9BVV6 1533 aa31.28■■■□□ 2.6
TMEM88-201ENST00000301599 RUSC2Q8N2Y8 1516 aa31.26■■■□□ 2.59
TMEM88-201ENST00000301599 NPM1P06748 294 aaKnown RBP eCLIP31.11■■■□□ 2.57
TMEM88-201ENST00000301599 RAPGEF2Q9Y4G8 1499 aa31.03■■■□□ 2.56
TMEM88-201ENST00000301599 CARMIL2Q6F5E8 1435 aa31■■■□□ 2.55
TMEM88-201ENST00000301599 PTPRGP23470 1445 aa30.98■■■□□ 2.55
TMEM88-201ENST00000301599 TTBK1Q5TCY1 1321 aaPredicted RBP30.95■■■□□ 2.54
TMEM88-201ENST00000301599 IQGAP2Q13576 1575 aa30.94■■■□□ 2.54
TMEM88-201ENST00000301599 TNIKQ9UKE5 1360 aa30.93■■■□□ 2.54
TMEM88-201ENST00000301599 FAM69CQ0P6D2 419 aa30.87■■■□□ 2.53
TMEM88-201ENST00000301599 ADCY10Q96PN6 1610 aa30.87■■■□□ 2.53
TMEM88-201ENST00000301599 MAPKBP1O60336 1514 aa30.82■■■□□ 2.52
TMEM88-201ENST00000301599 ABCC10Q5T3U5 1492 aa30.81■■■□□ 2.52
TMEM88-201ENST00000301599 DISP1Q96F81 1524 aa30.79■■■□□ 2.52
TMEM88-201ENST00000301599 UGGT2Q9NYU1 1516 aa30.78■■■□□ 2.52
TMEM88-201ENST00000301599 PRXQ9BXM0 1461 aa30.76■■■□□ 2.52
TMEM88-201ENST00000301599 KIF13AQ9H1H9 1805 aa30.76■■■□□ 2.51
TMEM88-201ENST00000301599 CSRNP3Q8WYN3 585 aa30.73■■■□□ 2.51
TMEM88-201ENST00000301599 UACAQ9BZF9 1416 aa30.73■■■□□ 2.51
TMEM88-201ENST00000301599 ABCC2Q92887 1545 aa30.7■■■□□ 2.51
TMEM88-201ENST00000301599 UHRF1BP1LA0JNW5 1464 aa30.7■■■□□ 2.5
TMEM88-201ENST00000301599 DIP2BQ9P265 1576 aa30.64■■■□□ 2.5
TMEM88-201ENST00000301599 KIAA0556O60303 1618 aa30.63■■■□□ 2.49
TMEM88-201ENST00000301599 GOLGA3Q08378 1498 aa30.63■■■□□ 2.49
TMEM88-201ENST00000301599 CTTNBP2Q8WZ74 1663 aa30.61■■■□□ 2.49
TMEM88-201ENST00000301599 PLB1Q6P1J6 1458 aa30.59■■■□□ 2.49
TMEM88-201ENST00000301599 ASXL2Q76L83 1435 aa30.58■■■□□ 2.49
TMEM88-201ENST00000301599 EEA1Q15075 1411 aa30.56■■■□□ 2.48
TMEM88-201ENST00000301599 FAM9AQ8IZU1 332 aaPredicted RBP30.55■■■□□ 2.48
TMEM88-201ENST00000301599 KDM5BQ9UGL1 1544 aa30.54■■■□□ 2.48
TMEM88-201ENST00000301599 AEBP2Q6ZN18 517 aaPredicted RBP30.48■■■□□ 2.47
TMEM88-201ENST00000301599 P3H3Q8IVL6 736 aa30.45■■■□□ 2.47
TMEM88-201ENST00000301599 GLI2P10070 1586 aa30.43■■■□□ 2.46
TMEM88-201ENST00000301599 TSPOAP1O95153 1857 aa30.42■■■□□ 2.46
TMEM88-201ENST00000301599 CHIC1Q5VXU3 224 aa30.4■■■□□ 2.46
TMEM88-201ENST00000301599 ZCCHC11Q5TAX3 1644 aaKnown RBP30.4■■■□□ 2.46
TMEM88-201ENST00000301599 EPRSP07814 1512 aaKnown RBP30.38■■■□□ 2.45
TMEM88-201ENST00000301599 ABCA8O94911 1581 aa30.37■■■□□ 2.45
TMEM88-201ENST00000301599 KDM6BO15054 1643 aa30.33■■■□□ 2.45
TMEM88-201ENST00000301599 WDR7Q9Y4E6 1490 aa30.31■■■□□ 2.44
TMEM88-201ENST00000301599 RANGAP1P46060 587 aaPredicted RBP30.3■■■□□ 2.44
TMEM88-201ENST00000301599 KCNH8Q96L42 1107 aa30.3■■■□□ 2.44
TMEM88-201ENST00000301599 SAMD9Q5K651 1589 aa30.24■■■□□ 2.43
TMEM88-201ENST00000301599 ARID3CA6NKF2 412 aa30.23■■■□□ 2.43
TMEM88-201ENST00000301599 MAP3K4Q9Y6R4 1608 aa30.22■■■□□ 2.43
TMEM88-201ENST00000301599 PPRC1Q5VV67 1664 aaKnown RBP30.21■■■□□ 2.43
TMEM88-201ENST00000301599 TEX14Q8IWB6 1497 aa30.21■■■□□ 2.43
TMEM88-201ENST00000301599 ATP10BO94823 1461 aa30.19■■■□□ 2.42
TMEM88-201ENST00000301599 KIF21BO75037 1637 aa30.19■■■□□ 2.42
TMEM88-201ENST00000301599 UBTFP17480 764 aaKnown RBP30.17■■■□□ 2.42
TMEM88-201ENST00000301599 CD109Q6YHK3 1445 aa30.16■■■□□ 2.42
TMEM88-201ENST00000301599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.14■■■□□ 2.42
TMEM88-201ENST00000301599 HNRNPUL2Q1KMD3 747 aaKnown RBP30.14■■■□□ 2.42
TMEM88-201ENST00000301599 EHMT2Q96KQ7 1210 aa30.12■■■□□ 2.41
TMEM88-201ENST00000301599 FHOD3Q2V2M9 1422 aa30.11■■■□□ 2.41
TMEM88-201ENST00000301599 COL17A1Q9UMD9 1497 aaPredicted RBP30.11■■■□□ 2.41
TMEM88-201ENST00000301599 RAPGEF6Q8TEU7 1601 aa30.08■■■□□ 2.41
TMEM88-201ENST00000301599 MAGI3Q5TCQ9 1506 aa30.07■■■□□ 2.4
TMEM88-201ENST00000301599 CFAP43Q8NDM7 1665 aa30.05■■■□□ 2.4
TMEM88-201ENST00000301599 EFCAB5A4FU69 1503 aa30.03■■■□□ 2.4
TMEM88-201ENST00000301599 KDM4FA0A1W2PPD8 638 aa30.02■■■□□ 2.4
TMEM88-201ENST00000301599 NUP153P49790 1475 aaKnown RBP30■■■□□ 2.39
TMEM88-201ENST00000301599 PLEKHD1A6NEE1 506 aa30■■■□□ 2.39
TMEM88-201ENST00000301599 PHLDB1Q86UU1 1377 aa29.9■■■□□ 2.38
TMEM88-201ENST00000301599 ABCA9Q8IUA7 1624 aa29.89■■■□□ 2.37
TMEM88-201ENST00000301599 ATP1B4Q9UN42 357 aaPredicted RBP29.86■■■□□ 2.37
TMEM88-201ENST00000301599 FMN1Q68DA7 1419 aa29.85■■■□□ 2.37
TMEM88-201ENST00000301599 ARAP3Q8WWN8 1544 aa29.85■■■□□ 2.37
TMEM88-201ENST00000301599 ARHGAP35Q9NRY4 1499 aa29.83■■■□□ 2.37
TMEM88-201ENST00000301599 NEO1Q92859 1461 aa29.78■■■□□ 2.36
TMEM88-201ENST00000301599 ADGRL1O94910 1474 aa29.76■■■□□ 2.35
TMEM88-201ENST00000301599 CDK11AQ9UQ88 783 aaPredicted RBP29.76■■■□□ 2.35
TMEM88-201ENST00000301599 RAPGEF3O95398 923 aa29.74■■■□□ 2.35
TMEM88-201ENST00000301599 CDK13Q14004 1512 aaKnown RBP29.71■■■□□ 2.35
TMEM88-201ENST00000301599 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.66■■■□□ 2.34
TMEM88-201ENST00000301599 HECW1Q76N89 1606 aa29.66■■■□□ 2.34
TMEM88-201ENST00000301599 AKNAQ7Z591 1439 aa29.64■■■□□ 2.34
TMEM88-201ENST00000301599 FANCAO15360 1455 aa29.61■■■□□ 2.33
TMEM88-201ENST00000301599 DENND4BO75064 1496 aaPredicted RBP29.59■■■□□ 2.33
TMEM88-201ENST00000301599 PLCH2O75038 1416 aa29.57■■■□□ 2.32
TMEM88-201ENST00000301599 TTC37Q6PGP7 1564 aa29.56■■■□□ 2.32
TMEM88-201ENST00000301599 EFCAB2Q5VUJ9 269 aa29.55■■■□□ 2.32
TMEM88-201ENST00000301599 CASKIN1Q8WXD9 1431 aa29.54■■■□□ 2.32
TMEM88-201ENST00000301599 CFAP74Q9C0B2 1584 aa29.53■■■□□ 2.32
TMEM88-201ENST00000301599 TROQ12816 1431 aaPredicted RBP29.53■■■□□ 2.32
TMEM88-201ENST00000301599 CLIP1P30622 1438 aa29.52■■■□□ 2.32
TMEM88-201ENST00000301599 ARID4BQ4LE39 1312 aaPredicted RBP29.48■■■□□ 2.31
TMEM88-201ENST00000301599 FRMPD1Q5SYB0 1578 aa29.48■■■□□ 2.31
TMEM88-201ENST00000301599 SCAPERQ9BY12 1400 aa29.46■■■□□ 2.31
TMEM88-201ENST00000301599 CCDC18Q5T9S5 1454 aa29.45■■■□□ 2.31
TMEM88-201ENST00000301599 KIF14Q15058 1648 aa29.42■■■□□ 2.3
TMEM88-201ENST00000301599 RICTORQ6R327 1708 aa29.41■■■□□ 2.3
TMEM88-201ENST00000301599 LRRIQ1Q96JM4 1722 aa29.4■■■□□ 2.3
TMEM88-201ENST00000301599 PCF11O94913 1555 aaKnown RBP29.4■■■□□ 2.3
TMEM88-201ENST00000301599 FYCO1Q9BQS8 1478 aa29.39■■■□□ 2.3
TMEM88-201ENST00000301599 MAGI2Q86UL8 1455 aa29.38■■■□□ 2.29
TMEM88-201ENST00000301599 MYO5CQ9NQX4 1742 aa29.37■■■□□ 2.29
TMEM88-201ENST00000301599 ZMYM4Q5VZL5 1548 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms