RNA–Protein interactions for RNA: ENST00000300954.9

PCSK4-201, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCSK4, Length 2,661 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-201ENST00000300954 TDRD9Q8NDG6 1382 aaKnown RBP24.44■■□□□ 1.5
PCSK4-201ENST00000300954 PCF11O94913 1555 aaKnown RBP24.44■■□□□ 1.5
PCSK4-201ENST00000300954 CCNB3Q8WWL7 1395 aa24.43■■□□□ 1.5
PCSK4-201ENST00000300954 GAPVD1Q14C86 1478 aa24.43■■□□□ 1.5
PCSK4-201ENST00000300954 CFAP43Q8NDM7 1665 aa24.42■■□□□ 1.5
PCSK4-201ENST00000300954 LRRC9Q6ZRR7 1453 aa24.42■■□□□ 1.5
PCSK4-201ENST00000300954 TARBP1Q13395 1621 aaKnown RBP24.41■■□□□ 1.5
PCSK4-201ENST00000300954 FHOD3Q2V2M9 1422 aa24.39■■□□□ 1.49
PCSK4-201ENST00000300954 P3H3Q8IVL6 736 aa24.37■■□□□ 1.49
PCSK4-201ENST00000300954 AQRO60306 1485 aaKnown RBP eCLIP24.36■■□□□ 1.495e-8■■■■□ 21.5
PCSK4-201ENST00000300954 DHX57Q6P158 1386 aaKnown RBP24.36■■□□□ 1.49
PCSK4-201ENST00000300954 FYCO1Q9BQS8 1478 aa24.35■■□□□ 1.49
PCSK4-201ENST00000300954 CLSPNQ9HAW4 1339 aa24.34■■□□□ 1.49
PCSK4-201ENST00000300954 DIEXFQ68CQ4 756 aaKnown RBP24.33■■□□□ 1.49
PCSK4-201ENST00000300954 CASKIN1Q8WXD9 1431 aa24.33■■□□□ 1.49
PCSK4-201ENST00000300954 ZNF316A6NFI3 1004 aaPredicted RBP24.31■■□□□ 1.48
PCSK4-201ENST00000300954 SAMD9Q5K651 1589 aa24.3■■□□□ 1.48
PCSK4-201ENST00000300954 PHLDB1Q86UU1 1377 aa24.29■■□□□ 1.48
PCSK4-201ENST00000300954 MRC2Q9UBG0 1479 aa24.26■■□□□ 1.47
PCSK4-201ENST00000300954 FMN1Q68DA7 1419 aa24.25■■□□□ 1.47
PCSK4-201ENST00000300954 PBRM1Q86U86 1689 aa24.25■■□□□ 1.47
PCSK4-201ENST00000300954 SNAPC4Q5SXM2 1469 aa24.25■■□□□ 1.47
PCSK4-201ENST00000300954 ATP1B4Q9UN42 357 aaPredicted RBP24.18■■□□□ 1.46
PCSK4-201ENST00000300954 ITGAEP38570 1179 aa24.16■■□□□ 1.46
PCSK4-201ENST00000300954 LRRIQ1Q96JM4 1722 aa24.16■■□□□ 1.46
PCSK4-201ENST00000300954 ADAMTS12P58397 1594 aa24.14■■□□□ 1.46
PCSK4-201ENST00000300954 RAB3GAP2Q9H2M9 1393 aa24.13■■□□□ 1.45
PCSK4-201ENST00000300954 GRIN2BQ13224 1484 aa24.13■■□□□ 1.45
PCSK4-201ENST00000300954 WDR62O43379 1518 aa24.12■■□□□ 1.45
PCSK4-201ENST00000300954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.1■■□□□ 1.45
PCSK4-201ENST00000300954 THOC2Q8NI27 1593 aaKnown RBP24.1■■□□□ 1.45
PCSK4-201ENST00000300954 SETD5Q9C0A6 1442 aa24.09■■□□□ 1.45
PCSK4-201ENST00000300954 IFT140Q96RY7 1462 aa24.08■■□□□ 1.44
PCSK4-201ENST00000300954 FAM50AQ14320 339 aaKnown RBP24.06■■□□□ 1.44
PCSK4-201ENST00000300954 IQGAP2Q13576 1575 aa24.05■■□□□ 1.44
PCSK4-201ENST00000300954 MAPKBP1O60336 1514 aa24.04■■□□□ 1.44
PCSK4-201ENST00000300954 ZNF608Q9ULD9 1512 aaPredicted RBP24.03■■□□□ 1.44
PCSK4-201ENST00000300954 FGD6Q6ZV73 1430 aa24.01■■□□□ 1.43
PCSK4-201ENST00000300954 MTUS2Q5JR59 1369 aa24■■□□□ 1.43
PCSK4-201ENST00000300954 EHBP1L1Q8N3D4 1523 aa23.96■■□□□ 1.43
PCSK4-201ENST00000300954 NCOA2Q15596 1464 aa23.95■■□□□ 1.42
PCSK4-201ENST00000300954 SUPT6HQ7KZ85 1726 aaKnown RBP23.95■■□□□ 1.42
PCSK4-201ENST00000300954 UGGT2Q9NYU1 1516 aa23.94■■□□□ 1.42
PCSK4-201ENST00000300954 CCDC18Q5T9S5 1454 aa23.93■■□□□ 1.42
PCSK4-201ENST00000300954 MAGI3Q5TCQ9 1506 aa23.93■■□□□ 1.42
PCSK4-201ENST00000300954 SCAF1Q9H7N4 1312 aaKnown RBP23.93■■□□□ 1.42
PCSK4-201ENST00000300954 ARHGEF11O15085 1522 aa23.93■■□□□ 1.42
PCSK4-201ENST00000300954 HECW1Q76N89 1606 aa23.92■■□□□ 1.42
PCSK4-201ENST00000300954 EIF4G3O43432 1585 aaKnown RBP23.91■■□□□ 1.42
PCSK4-201ENST00000300954 MYOM3Q5VTT5 1437 aa23.91■■□□□ 1.42
PCSK4-201ENST00000300954 ACIN1Q9UKV3 1341 aaKnown RBP23.89■■□□□ 1.42
PCSK4-201ENST00000300954 KIAA0586Q9BVV6 1533 aa23.87■■□□□ 1.41
PCSK4-201ENST00000300954 MIER1Q8N108 512 aa23.87■■□□□ 1.41
PCSK4-201ENST00000300954 PTPRKQ15262 1439 aa23.86■■□□□ 1.41
PCSK4-201ENST00000300954 NEUROD1Q13562 356 aa23.86■■□□□ 1.41
PCSK4-201ENST00000300954 ERCC6Q03468 1493 aa23.86■■□□□ 1.41
PCSK4-201ENST00000300954 EPRSP07814 1512 aaKnown RBP23.85■■□□□ 1.41
PCSK4-201ENST00000300954 GRIN2AQ12879 1464 aa23.83■■□□□ 1.41
PCSK4-201ENST00000300954 PTPN23Q9H3S7 1636 aa23.81■■□□□ 1.4
PCSK4-201ENST00000300954 DISP1Q96F81 1524 aa23.81■■□□□ 1.4
PCSK4-201ENST00000300954 KIAA0556O60303 1618 aa23.81■■□□□ 1.4
PCSK4-201ENST00000300954 HFM1A2PYH4 1435 aa23.81■■□□□ 1.4
PCSK4-201ENST00000300954 CENPBP07199 599 aaPredicted RBP23.79■■□□□ 1.4
PCSK4-201ENST00000300954 CDK13Q14004 1512 aaKnown RBP23.78■■□□□ 1.4
PCSK4-201ENST00000300954 TCOF1Q13428 1488 aaKnown RBP23.77■■□□□ 1.4
PCSK4-201ENST00000300954 MAGI1Q96QZ7 1491 aaPredicted RBP23.77■■□□□ 1.4
PCSK4-201ENST00000300954 SIN3AQ96ST3 1273 aa23.74■■□□□ 1.39
PCSK4-201ENST00000300954 NAIPQ13075 1403 aa23.73■■□□□ 1.39
PCSK4-201ENST00000300954 SYNJ2O15056 1496 aa23.71■■□□□ 1.39
PCSK4-201ENST00000300954 TIMELESSQ9UNS1 1208 aa23.7■■□□□ 1.39
PCSK4-201ENST00000300954 CEP170Q5SW79 1584 aa23.7■■□□□ 1.38
PCSK4-201ENST00000300954 UACAQ9BZF9 1416 aa23.69■■□□□ 1.38
PCSK4-201ENST00000300954 MIA2Q96PC5 1412 aa23.68■■□□□ 1.38
PCSK4-201ENST00000300954 RAPGEF6Q8TEU7 1601 aa23.68■■□□□ 1.38
PCSK4-201ENST00000300954 NUP153P49790 1475 aaKnown RBP23.67■■□□□ 1.38
PCSK4-201ENST00000300954 GCC2Q8IWJ2 1684 aa23.63■■□□□ 1.37
PCSK4-201ENST00000300954 CHMP7Q8WUX9 453 aaPredicted RBP23.63■■□□□ 1.37
PCSK4-201ENST00000300954 NUP160Q12769 1436 aa23.61■■□□□ 1.37
PCSK4-201ENST00000300954 ARID3CA6NKF2 412 aa23.61■■□□□ 1.37
PCSK4-201ENST00000300954 AKNAQ7Z591 1439 aa23.6■■□□□ 1.37
PCSK4-201ENST00000300954 YTHDC1Q96MU7 727 aaKnown RBP23.58■■□□□ 1.37
PCSK4-201ENST00000300954 PPP1R15AO75807 674 aaPredicted RBP23.57■■□□□ 1.36
PCSK4-201ENST00000300954 GTF3C3Q9Y5Q9 886 aa23.54■■□□□ 1.36
PCSK4-201ENST00000300954 RRP7BPQ9NSQ0 103 aa23.53■■□□□ 1.36
PCSK4-201ENST00000300954 KDM6BO15054 1643 aa23.53■■□□□ 1.36
PCSK4-201ENST00000300954 CHIC2Q9UKJ5 165 aa23.52■■□□□ 1.36
PCSK4-201ENST00000300954 PLB1Q6P1J6 1458 aa23.51■■□□□ 1.35
PCSK4-201ENST00000300954 FBLN2P98095 1184 aa23.51■■□□□ 1.35
PCSK4-201ENST00000300954 JPH4Q96JJ6 628 aa23.5■■□□□ 1.35
PCSK4-201ENST00000300954 DENND4BO75064 1496 aaPredicted RBP23.5■■□□□ 1.35
PCSK4-201ENST00000300954 CARMIL2Q6F5E8 1435 aa23.49■■□□□ 1.35
PCSK4-201ENST00000300954 DNMT1P26358 1616 aaKnown RBP23.49■■□□□ 1.35
PCSK4-201ENST00000300954 CDK11AQ9UQ88 783 aaPredicted RBP23.48■■□□□ 1.35
PCSK4-201ENST00000300954 DAPK1P53355 1430 aa23.48■■□□□ 1.35
PCSK4-201ENST00000300954 TROQ12816 1431 aaPredicted RBP23.48■■□□□ 1.35
PCSK4-201ENST00000300954 TONSLQ96HA7 1378 aa23.46■■□□□ 1.35
PCSK4-201ENST00000300954 PRG4Q92954 1404 aaPredicted RBP23.46■■□□□ 1.35
PCSK4-201ENST00000300954 ADCY10Q96PN6 1610 aa23.46■■□□□ 1.35
PCSK4-201ENST00000300954 ROCK1Q13464 1354 aa23.45■■□□□ 1.34
PCSK4-201ENST00000300954 ABCC5O15440 1437 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms