RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.12■□□□□ 0.17
ERCC1-202ENST00000300853 KANK4Q5T7N3 995 aaPredicted RBP16.12■□□□□ 0.17
ERCC1-202ENST00000300853 P3H3Q8IVL6 736 aa16.11■□□□□ 0.17
ERCC1-202ENST00000300853 RUSC2Q8N2Y8 1516 aa16.09■□□□□ 0.17
ERCC1-202ENST00000300853 LAS1LQ9Y4W2 734 aaKnown RBP16.09■□□□□ 0.17
ERCC1-202ENST00000300853 ANO8Q9HCE9 1232 aaPredicted RBP16.08■□□□□ 0.17
ERCC1-202ENST00000300853 CCNB3Q8WWL7 1395 aa16.08■□□□□ 0.17
ERCC1-202ENST00000300853 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.16
ERCC1-202ENST00000300853 NEFMP07197 916 aa16.06■□□□□ 0.16
ERCC1-202ENST00000300853 SENP3-EIF4A1A0A087X0R7 540 aa16.05■□□□□ 0.16
ERCC1-202ENST00000300853 WIZO95785 1651 aa16.04■□□□□ 0.16
ERCC1-202ENST00000300853 RAB3GAP2Q9H2M9 1393 aa16.01■□□□□ 0.15
ERCC1-202ENST00000300853 ERICH6BQ5W0A0 696 aa16.01■□□□□ 0.15
ERCC1-202ENST00000300853 ZNF326Q5BKZ1 582 aaKnown RBP16.01■□□□□ 0.15
ERCC1-202ENST00000300853 SALL2Q9Y467 1007 aaPredicted RBP15.97■□□□□ 0.15
ERCC1-202ENST00000300853 EIF4G2P78344 907 aaKnown RBP eCLIP15.96■□□□□ 0.15
ERCC1-202ENST00000300853 IPO9Q96P70 1041 aaKnown RBP15.95■□□□□ 0.14
ERCC1-202ENST00000300853 TIMELESSQ9UNS1 1208 aa15.94■□□□□ 0.14
ERCC1-202ENST00000300853 PPM1GO15355 546 aaPredicted RBP15.94■□□□□ 0.14
ERCC1-202ENST00000300853 PPP1R15AO75807 674 aaPredicted RBP15.94■□□□□ 0.14
ERCC1-202ENST00000300853 SETD5Q9C0A6 1442 aa15.92■□□□□ 0.14
ERCC1-202ENST00000300853 BAZ1AQ9NRL2 1556 aaPredicted RBP15.92■□□□□ 0.14
ERCC1-202ENST00000300853 GLIPR1L2Q4G1C9 344 aa15.92■□□□□ 0.14
ERCC1-202ENST00000300853 PAK3O75914 559 aaPredicted RBP15.9■□□□□ 0.14
ERCC1-202ENST00000300853 TMC1Q8TDI8 760 aa15.89■□□□□ 0.13
ERCC1-202ENST00000300853 IL27Q8NEV9 243 aa15.88■□□□□ 0.13
ERCC1-202ENST00000300853 RAPGEF2Q9Y4G8 1499 aa15.87■□□□□ 0.13
ERCC1-202ENST00000300853 ARXQ96QS3 562 aa15.86■□□□□ 0.13
ERCC1-202ENST00000300853 CHIC2Q9UKJ5 165 aa15.85■□□□□ 0.13
ERCC1-202ENST00000300853 DDRGK1Q96HY6 314 aa15.84■□□□□ 0.13
ERCC1-202ENST00000300853 HSPA5P11021 654 aaKnown RBP15.82■□□□□ 0.12
ERCC1-202ENST00000300853 BAZ1BQ9UIG0 1483 aaKnown RBP15.79■□□□□ 0.12
ERCC1-202ENST00000300853 RRP7BPQ9NSQ0 103 aa15.78■□□□□ 0.12
ERCC1-202ENST00000300853 TOP2AP11388 1531 aaKnown RBP15.76■□□□□ 0.11
ERCC1-202ENST00000300853 KIF21BO75037 1637 aa15.73■□□□□ 0.11
ERCC1-202ENST00000300853 NACADO15069 1562 aa15.72■□□□□ 0.11
ERCC1-202ENST00000300853 MTUS2Q5JR59 1369 aa15.72■□□□□ 0.11
ERCC1-202ENST00000300853 USP35Q9P2H5 1018 aa15.72■□□□□ 0.11
ERCC1-202ENST00000300853 NUDCQ9Y266 331 aa15.7■□□□□ 0.1
ERCC1-202ENST00000300853 ARID3CA6NKF2 412 aa15.7■□□□□ 0.1
ERCC1-202ENST00000300853 ZBED9Q6R2W3 1325 aa15.69■□□□□ 0.1
ERCC1-202ENST00000300853 TCERG1O14776 1098 aaKnown RBP15.69■□□□□ 0.1
ERCC1-202ENST00000300853 KIF27Q86VH2 1401 aa15.68■□□□□ 0.1
ERCC1-202ENST00000300853 PRKRIP1Q9H875 184 aaPredicted RBP15.67■□□□□ 0.1
ERCC1-202ENST00000300853 WDR97A6NE52 1622 aa15.67■□□□□ 0.1
ERCC1-202ENST00000300853 NAP1L5Q96NT1 182 aaPredicted RBP15.67■□□□□ 0.1
ERCC1-202ENST00000300853 GSE1Q14687 1217 aa15.65■□□□□ 0.1
ERCC1-202ENST00000300853 BRPF3Q9ULD4 1205 aa15.65■□□□□ 0.1
ERCC1-202ENST00000300853 PDE4AP27815 886 aa15.65■□□□□ 0.1
ERCC1-202ENST00000300853 RRBP1Q9P2E9 1410 aaKnown RBP15.64■□□□□ 0.09
ERCC1-202ENST00000300853 CANXP27824 592 aaKnown RBP15.62■□□□□ 0.09
ERCC1-202ENST00000300853 SMARCA2P51531 1590 aa15.62■□□□□ 0.09
ERCC1-202ENST00000300853 SLC4A3P48751 1232 aa15.61■□□□□ 0.09
ERCC1-202ENST00000300853 RGS3P49796 1198 aa15.61■□□□□ 0.09
ERCC1-202ENST00000300853 CCDC184Q52MB2 194 aa15.61■□□□□ 0.09
ERCC1-202ENST00000300853 SLC4A1APQ9BWU0 796 aaKnown RBP15.58■□□□□ 0.08
ERCC1-202ENST00000300853 UPF2Q9HAU5 1272 aaKnown RBP15.58■□□□□ 0.08
ERCC1-202ENST00000300853 RCAN3Q9UKA8 241 aa15.58■□□□□ 0.08
ERCC1-202ENST00000300853 WASHC2AQ641Q2 1341 aa15.57■□□□□ 0.08
ERCC1-202ENST00000300853 EXOC6Q8TAG9 804 aa15.57■□□□□ 0.08
ERCC1-202ENST00000300853 RSPH6AQ9H0K4 717 aa15.57■□□□□ 0.08
ERCC1-202ENST00000300853 FOXD1Q16676 465 aa15.56■□□□□ 0.08
ERCC1-202ENST00000300853 ARHGAP35Q9NRY4 1499 aa15.55■□□□□ 0.08
ERCC1-202ENST00000300853 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.55■□□□□ 0.08
ERCC1-202ENST00000300853 FHAD1B1AJZ9 1412 aa15.54■□□□□ 0.08
ERCC1-202ENST00000300853 BECN1Q14457 450 aa15.54■□□□□ 0.08
ERCC1-202ENST00000300853 L3MBTL2Q969R5 705 aa15.54■□□□□ 0.08
ERCC1-202ENST00000300853 KDM2AQ9Y2K7 1162 aa15.54■□□□□ 0.08
ERCC1-202ENST00000300853 ARAP1Q96P48 1450 aa15.53■□□□□ 0.08
ERCC1-202ENST00000300853 AKNAQ7Z591 1439 aa15.53■□□□□ 0.08
ERCC1-202ENST00000300853 NFKBIBQ15653 356 aa15.51■□□□□ 0.07
ERCC1-202ENST00000300853 PHLDB1Q86UU1 1377 aa15.5■□□□□ 0.07
ERCC1-202ENST00000300853 VSIG10Q8N0Z9 540 aa15.5■□□□□ 0.07
ERCC1-202ENST00000300853 FRAT1Q92837 279 aaPredicted RBP15.5■□□□□ 0.07
ERCC1-202ENST00000300853 RRP1P56182 461 aaKnown RBP15.48■□□□□ 0.07
ERCC1-202ENST00000300853 UBE2Q2Q8WVN8 375 aa15.48■□□□□ 0.07
ERCC1-202ENST00000300853 PNNQ9H307 717 aaKnown RBP15.48■□□□□ 0.07
ERCC1-202ENST00000300853 ZNF777Q9ULD5 760 aaPredicted RBP15.48■□□□□ 0.07
ERCC1-202ENST00000300853 SMARCA4P51532 1647 aa15.48■□□□□ 0.07
ERCC1-202ENST00000300853 ARID4BQ4LE39 1312 aaPredicted RBP15.48■□□□□ 0.07
ERCC1-202ENST00000300853 L1TD1Q5T7N2 865 aaKnown RBP15.47■□□□□ 0.07
ERCC1-202ENST00000300853 TRIM44Q96DX7 344 aaPredicted RBP15.47■□□□□ 0.07
ERCC1-202ENST00000300853 CNTLNQ9NXG0 1405 aa15.47■□□□□ 0.07
ERCC1-202ENST00000300853 SLKQ9H2G2 1235 aaPredicted RBP15.46■□□□□ 0.07
ERCC1-202ENST00000300853 HSP90AA1P07900 732 aaKnown RBP15.46■□□□□ 0.07
ERCC1-202ENST00000300853 MS4A1P11836 297 aa15.46■□□□□ 0.07
ERCC1-202ENST00000300853 ANP32BQ92688 251 aaKnown RBP15.46■□□□□ 0.07
ERCC1-202ENST00000300853 CARMIL1Q5VZK9 1371 aa15.45■□□□□ 0.06
ERCC1-202ENST00000300853 CARD11Q9BXL7 1154 aa15.45■□□□□ 0.06
ERCC1-202ENST00000300853 WDR43Q15061 677 aaKnown RBP eCLIP15.45■□□□□ 0.06
ERCC1-202ENST00000300853 SYNJ1O43426 1573 aa15.45■□□□□ 0.06
ERCC1-202ENST00000300853 CCDC18Q5T9S5 1454 aa15.44■□□□□ 0.06
ERCC1-202ENST00000300853 PLIN1O60240 522 aa15.44■□□□□ 0.06
ERCC1-202ENST00000300853 FMN1Q68DA7 1419 aa15.44■□□□□ 0.06
ERCC1-202ENST00000300853 MPHOSPH9Q99550 1183 aa15.44■□□□□ 0.06
ERCC1-202ENST00000300853 CCDC7Q96M83 1385 aa15.44■□□□□ 0.06
ERCC1-202ENST00000300853 PKNOX2Q96KN3 472 aa15.43■□□□□ 0.06
ERCC1-202ENST00000300853 BACH2Q9BYV9 841 aa15.41■□□□□ 0.06
ERCC1-202ENST00000300853 GZF1Q9H116 711 aaPredicted RBP15.41■□□□□ 0.06
ERCC1-202ENST00000300853 CUX2O14529 1486 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms