RNA–Protein interactions for RNA: ENST00000300215.7

EPB42-201, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 4,553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-201ENST00000300215 MRS2Q9HD23 443 aa15.31■□□□□ 0.04
EPB42-201ENST00000300215 MIER1Q8N108 512 aa15.31■□□□□ 0.04
EPB42-201ENST00000300215 PLPPR3Q6T4P5 718 aa15.3■□□□□ 0.04
EPB42-201ENST00000300215 SCAF1Q9H7N4 1312 aaKnown RBP15.29■□□□□ 0.04
EPB42-201ENST00000300215 STAG3Q9UJ98 1225 aa15.29■□□□□ 0.04
EPB42-201ENST00000300215 TNIKQ9UKE5 1360 aa15.29■□□□□ 0.04
EPB42-201ENST00000300215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.27■□□□□ 0.04
EPB42-201ENST00000300215 ESF1Q9H501 851 aaKnown RBP15.27■□□□□ 0.04
EPB42-201ENST00000300215 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.27■□□□□ 0.03
EPB42-201ENST00000300215 KDM2AQ9Y2K7 1162 aa15.27■□□□□ 0.03
EPB42-201ENST00000300215 SENP3-EIF4A1A0A087X0R7 540 aa15.22■□□□□ 0.03
EPB42-201ENST00000300215 KIF27Q86VH2 1401 aa15.21■□□□□ 0.03
EPB42-201ENST00000300215 CEP164Q9UPV0 1460 aa15.21■□□□□ 0.03
EPB42-201ENST00000300215 WDR43Q15061 677 aaKnown RBP eCLIP15.21■□□□□ 0.02
EPB42-201ENST00000300215 MTUS2Q5JR59 1369 aa15.17■□□□□ 0.02
EPB42-201ENST00000300215 SENP3Q9H4L4 574 aaPredicted RBP15.15■□□□□ 0.02
EPB42-201ENST00000300215 GLIPR1L2Q4G1C9 344 aa15.14■□□□□ 0.01
EPB42-201ENST00000300215 CHMP7Q8WUX9 453 aaPredicted RBP15.14■□□□□ 0.01
EPB42-201ENST00000300215 TSPY4P0CV99 314 aa15.14■□□□□ 0.01
EPB42-201ENST00000300215 TSPY10P0CW01 314 aa15.14■□□□□ 0.01
EPB42-201ENST00000300215 TOP2AP11388 1531 aaKnown RBP15.12■□□□□ 0.01
EPB42-201ENST00000300215 EIF4G2P78344 907 aaKnown RBP eCLIP15.1■□□□□ 0.01
EPB42-201ENST00000300215 CUX2O14529 1486 aa15.09■□□□□ 0.01
EPB42-201ENST00000300215 NPM1P06748 294 aaKnown RBP eCLIP15.09■□□□□ 0.01
EPB42-201ENST00000300215 RRP7BPQ9NSQ0 103 aa15.08■□□□□ 0.01
EPB42-201ENST00000300215 PLEKHG5O94827 1062 aa15.08■□□□□ 0
EPB42-201ENST00000300215 SMARCA2P51531 1590 aa15.06■□□□□ 0
EPB42-201ENST00000300215 ATAD2BQ9ULI0 1458 aa15.06■□□□□ 0
EPB42-201ENST00000300215 SMARCA4P51532 1647 aa15.06■□□□□ 0
EPB42-201ENST00000300215 CARMIL1Q5VZK9 1371 aa15.05■□□□□ -0
EPB42-201ENST00000300215 RUSC2Q8N2Y8 1516 aa15.05■□□□□ -0
EPB42-201ENST00000300215 RGL3Q3MIN7 710 aa15.03■□□□□ -0
EPB42-201ENST00000300215 MYH16Q9H6N6 1097 aa15.03■□□□□ -0
EPB42-201ENST00000300215 A0A0G2JS52 829 aa15.02■□□□□ -0
EPB42-201ENST00000300215 KANK4Q5T7N3 995 aaPredicted RBP15.02■□□□□ -0
EPB42-201ENST00000300215 SUPT16HQ9Y5B9 1047 aaKnown RBP15.02□□□□□ -0.01
EPB42-201ENST00000300215 TRIM44Q96DX7 344 aaPredicted RBP14.97□□□□□ -0.01
EPB42-201ENST00000300215 BECN1Q14457 450 aa14.96□□□□□ -0.01
EPB42-201ENST00000300215 VPS8Q8N3P4 1428 aa14.96□□□□□ -0.02
EPB42-201ENST00000300215 TDRD9Q8NDG6 1382 aaKnown RBP14.95□□□□□ -0.02
EPB42-201ENST00000300215 ZBTB7CA1YPR0 619 aa14.95□□□□□ -0.02
EPB42-201ENST00000300215 SIN3AQ96ST3 1273 aa14.95□□□□□ -0.02
EPB42-201ENST00000300215 NEUROD2Q15784 382 aa14.94□□□□□ -0.02
EPB42-201ENST00000300215 C14orf37Q86TY3 774 aa14.93□□□□□ -0.02
EPB42-201ENST00000300215 NCLP19338 710 aaKnown RBP14.93□□□□□ -0.02
EPB42-201ENST00000300215 TPRNQ4KMQ1 711 aa14.93□□□□□ -0.02
EPB42-201ENST00000300215 KCNH8Q96L42 1107 aa14.92□□□□□ -0.02
EPB42-201ENST00000300215 DDRGK1Q96HY6 314 aa14.92□□□□□ -0.02
EPB42-201ENST00000300215 RAPGEF2Q9Y4G8 1499 aa14.92□□□□□ -0.02
EPB42-201ENST00000300215 PPM1GO15355 546 aaPredicted RBP14.91□□□□□ -0.02
EPB42-201ENST00000300215 ANP32EQ9BTT0 268 aa14.91□□□□□ -0.02
EPB42-201ENST00000300215 CADPSQ9ULU8 1353 aa14.91□□□□□ -0.02
EPB42-201ENST00000300215 RTN4Q9NQC3 1192 aaKnown RBP14.9□□□□□ -0.02
EPB42-201ENST00000300215 LAS1LQ9Y4W2 734 aaKnown RBP14.9□□□□□ -0.02
EPB42-201ENST00000300215 GOLGA6L22H0YM25 854 aa14.9□□□□□ -0.02
EPB42-201ENST00000300215 RGS3P49796 1198 aa14.9□□□□□ -0.02
EPB42-201ENST00000300215 CCNB3Q8WWL7 1395 aa14.9□□□□□ -0.02
EPB42-201ENST00000300215 PLEKHD1A6NEE1 506 aa14.88□□□□□ -0.03
EPB42-201ENST00000300215 ERCC6Q03468 1493 aa14.88□□□□□ -0.03
EPB42-201ENST00000300215 PPP1R15AO75807 674 aaPredicted RBP14.87□□□□□ -0.03
EPB42-201ENST00000300215 KNSTRNQ9Y448 316 aa14.87□□□□□ -0.03
EPB42-201ENST00000300215 CFDP1Q9UEE9 299 aaPredicted RBP14.86□□□□□ -0.03
EPB42-201ENST00000300215 CDK11BP21127 795 aaKnown RBP14.86□□□□□ -0.03
EPB42-201ENST00000300215 PTMAP06454 111 aaKnown RBP14.85□□□□□ -0.03
EPB42-201ENST00000300215 CARD11Q9BXL7 1154 aa14.85□□□□□ -0.03
EPB42-201ENST00000300215 EIF4G1Q04637 1599 aaKnown RBP14.84□□□□□ -0.03
EPB42-201ENST00000300215 FTSJ3Q8IY81 847 aaKnown RBP14.84□□□□□ -0.03
EPB42-201ENST00000300215 B4GALNT3Q6L9W6 998 aa14.84□□□□□ -0.03
EPB42-201ENST00000300215 CFAP53Q96M91 514 aa14.83□□□□□ -0.04
EPB42-201ENST00000300215 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.04
EPB42-201ENST00000300215 FRAT1Q92837 279 aaPredicted RBP14.83□□□□□ -0.04
EPB42-201ENST00000300215 DNTTIP2Q5QJE6 756 aaKnown RBP14.82□□□□□ -0.04
EPB42-201ENST00000300215 TNNT2P45379 298 aaPredicted RBP14.81□□□□□ -0.04
EPB42-201ENST00000300215 ERICH6BQ5W0A0 696 aa14.8□□□□□ -0.04
EPB42-201ENST00000300215 PPP4R2Q9NY27 417 aa14.8□□□□□ -0.04
EPB42-201ENST00000300215 PLCB2Q00722 1185 aa14.79□□□□□ -0.04
EPB42-201ENST00000300215 PDS5BQ9NTI5 1447 aa14.79□□□□□ -0.04
EPB42-201ENST00000300215 ZRSR1Q15695 479 aaKnown RBP14.78□□□□□ -0.04
EPB42-201ENST00000300215 TAOK2Q9UL54 1235 aa14.77□□□□□ -0.04
EPB42-201ENST00000300215 CDCA8Q53HL2 280 aa14.76□□□□□ -0.05
EPB42-201ENST00000300215 NAP1L5Q96NT1 182 aaPredicted RBP14.75□□□□□ -0.05
EPB42-201ENST00000300215 NOP58Q9Y2X3 529 aaKnown RBP14.75□□□□□ -0.05
EPB42-201ENST00000300215 FHOD3Q2V2M9 1422 aa14.75□□□□□ -0.05
EPB42-201ENST00000300215 CC2D1BQ5T0F9 858 aaKnown RBP14.74□□□□□ -0.05
EPB42-201ENST00000300215 MAPK8IP3Q9UPT6 1336 aa14.74□□□□□ -0.05
EPB42-201ENST00000300215 FANCD2Q9BXW9 1451 aa14.71□□□□□ -0.05
EPB42-201ENST00000300215 CASC1Q6TDU7 716 aa14.71□□□□□ -0.05
EPB42-201ENST00000300215 U2SURPO15042 1029 aaKnown RBP14.71□□□□□ -0.06
EPB42-201ENST00000300215 LMOD2Q6P5Q4 547 aa14.7□□□□□ -0.06
EPB42-201ENST00000300215 TULP1O00294 542 aaPredicted RBP14.7□□□□□ -0.06
EPB42-201ENST00000300215 FOXD1Q16676 465 aa14.7□□□□□ -0.06
EPB42-201ENST00000300215 NUDCQ9Y266 331 aa14.7□□□□□ -0.06
EPB42-201ENST00000300215 HAP1P54257 671 aaPredicted RBP14.69□□□□□ -0.06
EPB42-201ENST00000300215 RAB3GAP2Q9H2M9 1393 aa14.69□□□□□ -0.06
EPB42-201ENST00000300215 SETD5Q9C0A6 1442 aa14.68□□□□□ -0.06
EPB42-201ENST00000300215 NCAPD3P42695 1498 aa14.67□□□□□ -0.06
EPB42-201ENST00000300215 ARHGAP35Q9NRY4 1499 aa14.67□□□□□ -0.06
EPB42-201ENST00000300215 IGF1RP08069 1367 aa14.67□□□□□ -0.06
EPB42-201ENST00000300215 POGKQ9P215 609 aa14.66□□□□□ -0.06
EPB42-201ENST00000300215 HSP90AB1P08238 724 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms