RNA–Protein interactions for RNA: ENST00000299697.11

TK2-201, Transcript of thymidine kinase 2, mitochondrial, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TK2, Length 5,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TK2-201ENST00000299697 STAG3Q9UJ98 1225 aa21.17■□□□□ 0.98
TK2-201ENST00000299697 L1TD1Q5T7N2 865 aaKnown RBP21.17■□□□□ 0.98
TK2-201ENST00000299697 CHGAP10645 457 aaKnown RBP21.16■□□□□ 0.98
TK2-201ENST00000299697 PABPN1Q86U42 306 aaKnown RBP eCLIP21.16■□□□□ 0.98
TK2-201ENST00000299697 CHMP4BQ9H444 224 aaKnown RBP21.14■□□□□ 0.97
TK2-201ENST00000299697 TSPY4P0CV99 314 aa21.14■□□□□ 0.97
TK2-201ENST00000299697 TSPY10P0CW01 314 aa21.14■□□□□ 0.97
TK2-201ENST00000299697 NRDCO43847 1150 aa21.13■□□□□ 0.97
TK2-201ENST00000299697 CDCA8Q53HL2 280 aa21.12■□□□□ 0.97
TK2-201ENST00000299697 GOLGA6L6A8MZA4 724 aa21.12■□□□□ 0.97
TK2-201ENST00000299697 ARID3CA6NKF2 412 aa21.11■□□□□ 0.97
TK2-201ENST00000299697 SUPT16HQ9Y5B9 1047 aaKnown RBP21.1■□□□□ 0.97
TK2-201ENST00000299697 CFAP53Q96M91 514 aa21.08■□□□□ 0.96
TK2-201ENST00000299697 MS4A1P11836 297 aa21.07■□□□□ 0.96
TK2-201ENST00000299697 MTUS2Q5JR59 1369 aa21.07■□□□□ 0.96
TK2-201ENST00000299697 CHAF1AQ13111 956 aaPredicted RBP21.06■□□□□ 0.96
TK2-201ENST00000299697 EEA1Q15075 1411 aa21.05■□□□□ 0.96
TK2-201ENST00000299697 CLIP1P30622 1438 aa21.02■□□□□ 0.96
TK2-201ENST00000299697 CHIC2Q9UKJ5 165 aa21.02■□□□□ 0.96
TK2-201ENST00000299697 CCDC180Q9P1Z9 1646 aa21.01■□□□□ 0.95
TK2-201ENST00000299697 CFAP44Q96MT7 982 aa21■□□□□ 0.95
TK2-201ENST00000299697 LAS1LQ9Y4W2 734 aaKnown RBP21■□□□□ 0.95
TK2-201ENST00000299697 KDM2AQ9Y2K7 1162 aa20.99■□□□□ 0.95
TK2-201ENST00000299697 PTMSP20962 102 aa20.99■□□□□ 0.95
TK2-201ENST00000299697 ABCC9O60706 1549 aa20.99■□□□□ 0.95
TK2-201ENST00000299697 DEKP35659 375 aaKnown RBP20.98■□□□□ 0.95
TK2-201ENST00000299697 FTSJ3Q8IY81 847 aaKnown RBP20.98■□□□□ 0.95
TK2-201ENST00000299697 MSNP26038 577 aaKnown RBP20.98■□□□□ 0.95
TK2-201ENST00000299697 RSF1Q96T23 1441 aaPredicted RBP20.97■□□□□ 0.95
TK2-201ENST00000299697 RTN4Q9NQC3 1192 aaKnown RBP20.94■□□□□ 0.94
TK2-201ENST00000299697 KNSTRNQ9Y448 316 aa20.94■□□□□ 0.94
TK2-201ENST00000299697 HSP90AB1P08238 724 aaKnown RBP20.93■□□□□ 0.94
TK2-201ENST00000299697 TIMELESSQ9UNS1 1208 aa20.93■□□□□ 0.94
TK2-201ENST00000299697 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.92■□□□□ 0.945e-6■□□□□ 8.1
TK2-201ENST00000299697 CCER2I3L3R5 266 aa20.91■□□□□ 0.94
TK2-201ENST00000299697 NPM1P06748 294 aaKnown RBP eCLIP20.9■□□□□ 0.94
TK2-201ENST00000299697 HSCBQ8IWL3 235 aa20.9■□□□□ 0.94
TK2-201ENST00000299697 HIRIP3Q9BW71 556 aaPredicted RBP20.88■□□□□ 0.93
TK2-201ENST00000299697 NUDCQ9Y266 331 aa20.86■□□□□ 0.93
TK2-201ENST00000299697 GOLGA3Q08378 1498 aa20.85■□□□□ 0.93
TK2-201ENST00000299697 RBM19Q9Y4C8 960 aaKnown RBP20.85■□□□□ 0.93
TK2-201ENST00000299697 RGS3P49796 1198 aa20.85■□□□□ 0.93
TK2-201ENST00000299697 PLCB2Q00722 1185 aa20.84■□□□□ 0.93
TK2-201ENST00000299697 MAPK8IP3Q9UPT6 1336 aa20.81■□□□□ 0.92
TK2-201ENST00000299697 PNNQ9H307 717 aaKnown RBP20.81■□□□□ 0.92
TK2-201ENST00000299697 GOLGA6L4A6NEF3 574 aa20.8■□□□□ 0.92
TK2-201ENST00000299697 CEP162Q5TB80 1403 aa20.8■□□□□ 0.92
TK2-201ENST00000299697 GBP4Q96PP9 640 aa20.77■□□□□ 0.92
TK2-201ENST00000299697 CARD11Q9BXL7 1154 aa20.77■□□□□ 0.92
TK2-201ENST00000299697 MCCP23508 829 aa20.76■□□□□ 0.91
TK2-201ENST00000299697 B4GALNT3Q6L9W6 998 aa20.76■□□□□ 0.91
TK2-201ENST00000299697 RRP7BPQ9NSQ0 103 aa20.75■□□□□ 0.91
TK2-201ENST00000299697 KIAA2012Q0VF49 1180 aa20.75■□□□□ 0.91
TK2-201ENST00000299697 TCERG1O14776 1098 aaKnown RBP20.74■□□□□ 0.91
TK2-201ENST00000299697 HAP1P54257 671 aaPredicted RBP20.73■□□□□ 0.91
TK2-201ENST00000299697 TNIKQ9UKE5 1360 aa20.73■□□□□ 0.91
TK2-201ENST00000299697 FGD1P98174 961 aa20.69■□□□□ 0.9
TK2-201ENST00000299697 FRAT1Q92837 279 aaPredicted RBP20.69■□□□□ 0.9
TK2-201ENST00000299697 ZCCHC6Q5VYS8 1495 aaKnown RBP20.68■□□□□ 0.9
TK2-201ENST00000299697 SYAP1Q96A49 352 aaPredicted RBP20.67■□□□□ 0.9
TK2-201ENST00000299697 SCRIBQ14160 1630 aa20.65■□□□□ 0.9
TK2-201ENST00000299697 USP35Q9P2H5 1018 aa20.65■□□□□ 0.9
TK2-201ENST00000299697 KCNJ4P48050 445 aa20.65■□□□□ 0.9
TK2-201ENST00000299697 ARID4BQ4LE39 1312 aaPredicted RBP20.64■□□□□ 0.89
TK2-201ENST00000299697 DRC7Q8IY82 874 aa20.64■□□□□ 0.89
TK2-201ENST00000299697 HTATSF1O43719 755 aaKnown RBP20.62■□□□□ 0.89
TK2-201ENST00000299697 PLEKHD1A6NEE1 506 aa20.62■□□□□ 0.89
TK2-201ENST00000299697 TNNT3P45378 269 aaPredicted RBP20.6■□□□□ 0.89
TK2-201ENST00000299697 PPP1R15AO75807 674 aaPredicted RBP20.6■□□□□ 0.89
TK2-201ENST00000299697 CEP164Q9UPV0 1460 aa20.6■□□□□ 0.89
TK2-201ENST00000299697 GOLGA6L3A6NEY3 463 aa20.6■□□□□ 0.89
TK2-201ENST00000299697 TPRNQ4KMQ1 711 aa20.59■□□□□ 0.89
TK2-201ENST00000299697 IPO9Q96P70 1041 aaKnown RBP20.59■□□□□ 0.89
TK2-201ENST00000299697 RSPH6AQ9H0K4 717 aa20.59■□□□□ 0.89
TK2-201ENST00000299697 RGL3Q3MIN7 710 aa20.58■□□□□ 0.89
TK2-201ENST00000299697 NEUROD2Q15784 382 aa20.58■□□□□ 0.88
TK2-201ENST00000299697 TMF1P82094 1093 aa20.57■□□□□ 0.88
TK2-201ENST00000299697 OS9Q13438 667 aaPredicted RBP20.57■□□□□ 0.88
TK2-201ENST00000299697 IPO8O15397 1037 aaKnown RBP20.56■□□□□ 0.88
TK2-201ENST00000299697 RWDD1Q9H446 243 aaPredicted RBP20.54■□□□□ 0.88
TK2-201ENST00000299697 CFDP1Q9UEE9 299 aaPredicted RBP20.53■□□□□ 0.88
TK2-201ENST00000299697 TSHZ2Q9NRE2 1034 aa20.52■□□□□ 0.88
TK2-201ENST00000299697 MYO15BQ96JP2 1530 aa20.5■□□□□ 0.87
TK2-201ENST00000299697 CSPP1Q1MSJ5 1256 aa20.49■□□□□ 0.87
TK2-201ENST00000299697 TPM4P67936 248 aa20.49■□□□□ 0.87
TK2-201ENST00000299697 CCNB3Q8WWL7 1395 aa20.49■□□□□ 0.87
TK2-201ENST00000299697 C14orf37Q86TY3 774 aa20.49■□□□□ 0.87
TK2-201ENST00000299697 SIN3AQ96ST3 1273 aa20.48■□□□□ 0.87
TK2-201ENST00000299697 PMFBP1Q8TBY8 1022 aa20.48■□□□□ 0.87
TK2-201ENST00000299697 RCAN3Q9UKA8 241 aa20.48■□□□□ 0.87
TK2-201ENST00000299697 CHMP7Q8WUX9 453 aaPredicted RBP20.47■□□□□ 0.87
TK2-201ENST00000299697 HSP90AA2PQ14568 343 aaPredicted RBP20.47■□□□□ 0.87
TK2-201ENST00000299697 GOLGA6L1Q8N7Z2 621 aa20.47■□□□□ 0.87
TK2-201ENST00000299697 KIAA1211Q6ZU35 1233 aa20.46■□□□□ 0.87
TK2-201ENST00000299697 CCDC34Q96HJ3 373 aa20.46■□□□□ 0.87
TK2-201ENST00000299697 CALD1Q05682 793 aaKnown RBP20.45■□□□□ 0.87
TK2-201ENST00000299697 RALBP1Q15311 655 aa20.45■□□□□ 0.87
TK2-201ENST00000299697 KIF27Q86VH2 1401 aa20.45■□□□□ 0.86
TK2-201ENST00000299697 KTN1Q86UP2 1357 aaKnown RBP20.45■□□□□ 0.86
TK2-201ENST00000299697 CC2D1BQ5T0F9 858 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms