RNA–Protein interactions for RNA: ENST00000298919.7

PDZRN4-201, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 2 BASIC

Gene PDZRN4, Length 3,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-201ENST00000298919 ZNF316A6NFI3 1004 aaPredicted RBP9.72□□□□□ -0.85
PDZRN4-201ENST00000298919 PCF11O94913 1555 aaKnown RBP9.71□□□□□ -0.86
PDZRN4-201ENST00000298919 NEUROD1Q13562 356 aa9.7□□□□□ -0.86
PDZRN4-201ENST00000298919 LAMC3Q9Y6N6 1575 aa9.69□□□□□ -0.86
PDZRN4-201ENST00000298919 KIF21AQ7Z4S6 1674 aa9.69□□□□□ -0.86
PDZRN4-201ENST00000298919 P3H3Q8IVL6 736 aa9.69□□□□□ -0.86
PDZRN4-201ENST00000298919 CCNB3Q8WWL7 1395 aa9.69□□□□□ -0.86
PDZRN4-201ENST00000298919 PHLDB1Q86UU1 1377 aa9.69□□□□□ -0.86
PDZRN4-201ENST00000298919 LRRC9Q6ZRR7 1453 aa9.69□□□□□ -0.86
PDZRN4-201ENST00000298919 MAP3K1Q13233 1512 aa9.69□□□□□ -0.86
PDZRN4-201ENST00000298919 ABCA5Q8WWZ7 1642 aa9.68□□□□□ -0.86
PDZRN4-201ENST00000298919 CFAP43Q8NDM7 1665 aa9.68□□□□□ -0.86
PDZRN4-201ENST00000298919 FHOD3Q2V2M9 1422 aa9.68□□□□□ -0.86
PDZRN4-201ENST00000298919 LRRIQ1Q96JM4 1722 aa9.68□□□□□ -0.86
PDZRN4-201ENST00000298919 NCBP3Q53F19 620 aaKnown RBP9.67□□□□□ -0.86
PDZRN4-201ENST00000298919 CTTNBP2Q8WZ74 1663 aa9.67□□□□□ -0.86
PDZRN4-201ENST00000298919 TDRD9Q8NDG6 1382 aaKnown RBP9.66□□□□□ -0.86
PDZRN4-201ENST00000298919 CUL7Q14999 1698 aa9.66□□□□□ -0.86
PDZRN4-201ENST00000298919 AMER1Q5JTC6 1135 aaPredicted RBP9.65□□□□□ -0.87
PDZRN4-201ENST00000298919 MAPKBP1O60336 1514 aa9.65□□□□□ -0.87
PDZRN4-201ENST00000298919 TARBP1Q13395 1621 aaKnown RBP9.64□□□□□ -0.87
PDZRN4-201ENST00000298919 ACIN1Q9UKV3 1341 aaKnown RBP9.64□□□□□ -0.87
PDZRN4-201ENST00000298919 MIER1Q8N108 512 aa9.64□□□□□ -0.87
PDZRN4-201ENST00000298919 ITGAEP38570 1179 aa9.63□□□□□ -0.87
PDZRN4-201ENST00000298919 SNAPC4Q5SXM2 1469 aa9.63□□□□□ -0.87
PDZRN4-201ENST00000298919 RAB3GAP2Q9H2M9 1393 aa9.62□□□□□ -0.87
PDZRN4-201ENST00000298919 SAMD9Q5K651 1589 aa9.61□□□□□ -0.87
PDZRN4-201ENST00000298919 CASKIN1Q8WXD9 1431 aa9.61□□□□□ -0.87
PDZRN4-201ENST00000298919 GAPVD1Q14C86 1478 aa9.61□□□□□ -0.87
PDZRN4-201ENST00000298919 EFCAB5A4FU69 1503 aa9.6□□□□□ -0.87
PDZRN4-201ENST00000298919 CLSPNQ9HAW4 1339 aa9.6□□□□□ -0.87
PDZRN4-201ENST00000298919 FHAD1B1AJZ9 1412 aa9.6□□□□□ -0.87
PDZRN4-201ENST00000298919 FYCO1Q9BQS8 1478 aa9.6□□□□□ -0.87
PDZRN4-201ENST00000298919 AQRO60306 1485 aaKnown RBP eCLIP9.59□□□□□ -0.87
PDZRN4-201ENST00000298919 PDS5BQ9NTI5 1447 aa9.58□□□□□ -0.88
PDZRN4-201ENST00000298919 PTPRKQ15262 1439 aa9.56□□□□□ -0.88
PDZRN4-201ENST00000298919 MAGI3Q5TCQ9 1506 aa9.56□□□□□ -0.88
PDZRN4-201ENST00000298919 PBRM1Q86U86 1689 aa9.56□□□□□ -0.88
PDZRN4-201ENST00000298919 GRIN2BQ13224 1484 aa9.56□□□□□ -0.88
PDZRN4-201ENST00000298919 ATP1B4Q9UN42 357 aaPredicted RBP9.56□□□□□ -0.88
PDZRN4-201ENST00000298919 SETD5Q9C0A6 1442 aa9.55□□□□□ -0.88
PDZRN4-201ENST00000298919 SENP3Q9H4L4 574 aaPredicted RBP9.54□□□□□ -0.88
PDZRN4-201ENST00000298919 FAM50AQ14320 339 aaKnown RBP9.53□□□□□ -0.88
PDZRN4-201ENST00000298919 GTF3C3Q9Y5Q9 886 aa9.53□□□□□ -0.88
PDZRN4-201ENST00000298919 SIN3AQ96ST3 1273 aa9.52□□□□□ -0.89
PDZRN4-201ENST00000298919 YTHDC1Q96MU7 727 aaKnown RBP9.52□□□□□ -0.89
PDZRN4-201ENST00000298919 ZNF608Q9ULD9 1512 aaPredicted RBP9.52□□□□□ -0.89
PDZRN4-201ENST00000298919 FMN1Q68DA7 1419 aa9.52□□□□□ -0.89
PDZRN4-201ENST00000298919 FGD6Q6ZV73 1430 aa9.51□□□□□ -0.89
PDZRN4-201ENST00000298919 KCNA4P22459 653 aa9.51□□□□□ -0.89
PDZRN4-201ENST00000298919 ADAMTS12P58397 1594 aa9.5□□□□□ -0.89
PDZRN4-201ENST00000298919 ARHGEF11O15085 1522 aa9.5□□□□□ -0.89
PDZRN4-201ENST00000298919 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.5□□□□□ -0.89
PDZRN4-201ENST00000298919 NCOA2Q15596 1464 aa9.49□□□□□ -0.89
PDZRN4-201ENST00000298919 MRC2Q9UBG0 1479 aa9.48□□□□□ -0.89
PDZRN4-201ENST00000298919 UGGT2Q9NYU1 1516 aa9.47□□□□□ -0.89
PDZRN4-201ENST00000298919 IQGAP2Q13576 1575 aa9.46□□□□□ -0.89
PDZRN4-201ENST00000298919 THOC2Q8NI27 1593 aaKnown RBP9.46□□□□□ -0.9
PDZRN4-201ENST00000298919 WDR62O43379 1518 aa9.46□□□□□ -0.9
PDZRN4-201ENST00000298919 PTPN23Q9H3S7 1636 aa9.45□□□□□ -0.9
PDZRN4-201ENST00000298919 CDK13Q14004 1512 aaKnown RBP9.45□□□□□ -0.9
PDZRN4-201ENST00000298919 CENPBP07199 599 aaPredicted RBP9.45□□□□□ -0.9
PDZRN4-201ENST00000298919 MTUS2Q5JR59 1369 aa9.45□□□□□ -0.9
PDZRN4-201ENST00000298919 DENND4BO75064 1496 aaPredicted RBP9.45□□□□□ -0.9
PDZRN4-201ENST00000298919 SUPT6HQ7KZ85 1726 aaKnown RBP9.45□□□□□ -0.9
PDZRN4-201ENST00000298919 MYOM3Q5VTT5 1437 aa9.45□□□□□ -0.9
PDZRN4-201ENST00000298919 KDM6BO15054 1643 aa9.45□□□□□ -0.9
PDZRN4-201ENST00000298919 KCNH8Q96L42 1107 aa9.44□□□□□ -0.9
PDZRN4-201ENST00000298919 NAIPQ13075 1403 aa9.44□□□□□ -0.9
PDZRN4-201ENST00000298919 HFM1A2PYH4 1435 aa9.44□□□□□ -0.9
PDZRN4-201ENST00000298919 EHBP1L1Q8N3D4 1523 aa9.43□□□□□ -0.9
PDZRN4-201ENST00000298919 KDM5BQ9UGL1 1544 aa9.43□□□□□ -0.9
PDZRN4-201ENST00000298919 EPRSP07814 1512 aaKnown RBP9.43□□□□□ -0.9
PDZRN4-201ENST00000298919 DISP1Q96F81 1524 aa9.43□□□□□ -0.9
PDZRN4-201ENST00000298919 CCDC18Q5T9S5 1454 aa9.42□□□□□ -0.9
PDZRN4-201ENST00000298919 EIF4G3O43432 1585 aaKnown RBP9.41□□□□□ -0.9
PDZRN4-201ENST00000298919 TCOF1Q13428 1488 aaKnown RBP9.41□□□□□ -0.9
PDZRN4-201ENST00000298919 IFT140Q96RY7 1462 aa9.41□□□□□ -0.9
PDZRN4-201ENST00000298919 ARID3CA6NKF2 412 aa9.4□□□□□ -0.9
PDZRN4-201ENST00000298919 HECW1Q76N89 1606 aa9.4□□□□□ -0.9
PDZRN4-201ENST00000298919 HIRIP3Q9BW71 556 aaPredicted RBP9.4□□□□□ -0.9
PDZRN4-201ENST00000298919 PPP1R15AO75807 674 aaPredicted RBP9.39□□□□□ -0.91
PDZRN4-201ENST00000298919 KIAA0556O60303 1618 aa9.39□□□□□ -0.91
PDZRN4-201ENST00000298919 UACAQ9BZF9 1416 aa9.38□□□□□ -0.91
PDZRN4-201ENST00000298919 NUP153P49790 1475 aaKnown RBP9.37□□□□□ -0.91
PDZRN4-201ENST00000298919 CEP170Q5SW79 1584 aa9.37□□□□□ -0.91
PDZRN4-201ENST00000298919 GRIN2AQ12879 1464 aa9.37□□□□□ -0.91
PDZRN4-201ENST00000298919 GCC2Q8IWJ2 1684 aa9.37□□□□□ -0.91
PDZRN4-201ENST00000298919 KIAA0586Q9BVV6 1533 aa9.37□□□□□ -0.91
PDZRN4-201ENST00000298919 RRP7BPQ9NSQ0 103 aa9.36□□□□□ -0.91
PDZRN4-201ENST00000298919 CHIC2Q9UKJ5 165 aa9.36□□□□□ -0.91
PDZRN4-201ENST00000298919 ZNF644Q9H582 1327 aaPredicted RBP9.35□□□□□ -0.91
PDZRN4-201ENST00000298919 DDX10Q13206 875 aaKnown RBP9.33□□□□□ -0.92
PDZRN4-201ENST00000298919 RAPGEF6Q8TEU7 1601 aa9.33□□□□□ -0.92
PDZRN4-201ENST00000298919 TIMELESSQ9UNS1 1208 aa9.33□□□□□ -0.92
PDZRN4-201ENST00000298919 PLB1Q6P1J6 1458 aa9.32□□□□□ -0.92
PDZRN4-201ENST00000298919 MIA2Q96PC5 1412 aa9.31□□□□□ -0.92
PDZRN4-201ENST00000298919 FOXD1Q16676 465 aa9.31□□□□□ -0.92
PDZRN4-201ENST00000298919 ABCC5O15440 1437 aa9.31□□□□□ -0.92
PDZRN4-201ENST00000298919 PRG4Q92954 1404 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 1017.5 ms