RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 BECN1Q14457 450 aa22.74■■□□□ 1.23
TRIM9-201ENST00000298355 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.73■■□□□ 1.23
TRIM9-201ENST00000298355 RB1CC1Q8TDY2 1594 aa22.69■■□□□ 1.22
TRIM9-201ENST00000298355 RSF1Q96T23 1441 aaPredicted RBP22.69■■□□□ 1.22
TRIM9-201ENST00000298355 EIF4G2P78344 907 aaKnown RBP eCLIP22.69■■□□□ 1.22
TRIM9-201ENST00000298355 P3H3Q8IVL6 736 aa22.68■■□□□ 1.22
TRIM9-201ENST00000298355 TNIKQ9UKE5 1360 aa22.68■■□□□ 1.22
TRIM9-201ENST00000298355 TNNT2P45379 298 aaPredicted RBP22.64■■□□□ 1.22
TRIM9-201ENST00000298355 NACADO15069 1562 aa22.64■■□□□ 1.22
TRIM9-201ENST00000298355 PRKCSHP14314 528 aaPredicted RBP22.62■■□□□ 1.21
TRIM9-201ENST00000298355 FANCIQ9NVI1 1328 aa22.61■■□□□ 1.21
TRIM9-201ENST00000298355 GOLGA3Q08378 1498 aa22.61■■□□□ 1.21
TRIM9-201ENST00000298355 EEA1Q15075 1411 aa22.59■■□□□ 1.21
TRIM9-201ENST00000298355 IPO9Q96P70 1041 aaKnown RBP22.58■■□□□ 1.21
TRIM9-201ENST00000298355 L1TD1Q5T7N2 865 aaKnown RBP22.52■■□□□ 1.2
TRIM9-201ENST00000298355 SIN3AQ96ST3 1273 aa22.5■■□□□ 1.19
TRIM9-201ENST00000298355 SENP3-EIF4A1A0A087X0R7 540 aa22.46■■□□□ 1.19
TRIM9-201ENST00000298355 RSPH6AQ9H0K4 717 aa22.44■■□□□ 1.18
TRIM9-201ENST00000298355 WDR43Q15061 677 aaKnown RBP eCLIP22.43■■□□□ 1.18
TRIM9-201ENST00000298355 USP35Q9P2H5 1018 aa22.42■■□□□ 1.18
TRIM9-201ENST00000298355 GOLGA6L22H0YM25 854 aa22.42■■□□□ 1.18
TRIM9-201ENST00000298355 TIMELESSQ9UNS1 1208 aa22.4■■□□□ 1.18
TRIM9-201ENST00000298355 PNNQ9H307 717 aaKnown RBP22.4■■□□□ 1.18
TRIM9-201ENST00000298355 ANO8Q9HCE9 1232 aaPredicted RBP22.38■■□□□ 1.17
TRIM9-201ENST00000298355 CHIC2Q9UKJ5 165 aa22.38■■□□□ 1.17
TRIM9-201ENST00000298355 KCNH8Q96L42 1107 aa22.37■■□□□ 1.17
TRIM9-201ENST00000298355 TCERG1O14776 1098 aaKnown RBP22.36■■□□□ 1.17
TRIM9-201ENST00000298355 RGS3P49796 1198 aa22.35■■□□□ 1.17
TRIM9-201ENST00000298355 FBLN2P98095 1184 aa22.34■■□□□ 1.17
TRIM9-201ENST00000298355 VSIG10Q8N0Z9 540 aa22.31■■□□□ 1.16
TRIM9-201ENST00000298355 DNTTIP2Q5QJE6 756 aaKnown RBP22.3■■□□□ 1.16
TRIM9-201ENST00000298355 CEP164Q9UPV0 1460 aa22.29■■□□□ 1.16
TRIM9-201ENST00000298355 ARID4BQ4LE39 1312 aaPredicted RBP22.29■■□□□ 1.16
TRIM9-201ENST00000298355 PTMAP06454 111 aaKnown RBP22.28■■□□□ 1.16
TRIM9-201ENST00000298355 HSP90AA2PQ14568 343 aaPredicted RBP22.28■■□□□ 1.16
TRIM9-201ENST00000298355 NCLP19338 710 aaKnown RBP22.28■■□□□ 1.16
TRIM9-201ENST00000298355 ARID3CA6NKF2 412 aa22.26■■□□□ 1.15
TRIM9-201ENST00000298355 CECR2Q9BXF3 1484 aa22.26■■□□□ 1.15
TRIM9-201ENST00000298355 CCNB3Q8WWL7 1395 aa22.25■■□□□ 1.15
TRIM9-201ENST00000298355 GSE1Q14687 1217 aa22.25■■□□□ 1.15
TRIM9-201ENST00000298355 BAZ1AQ9NRL2 1556 aaPredicted RBP22.25■■□□□ 1.15
TRIM9-201ENST00000298355 CDK11BP21127 795 aaKnown RBP22.24■■□□□ 1.15
TRIM9-201ENST00000298355 ZNF777Q9ULD5 760 aaPredicted RBP22.21■■□□□ 1.15
TRIM9-201ENST00000298355 MSNP26038 577 aaKnown RBP22.21■■□□□ 1.15
TRIM9-201ENST00000298355 MTUS2Q5JR59 1369 aa22.19■■□□□ 1.14
TRIM9-201ENST00000298355 RRP7BPQ9NSQ0 103 aa22.19■■□□□ 1.14
TRIM9-201ENST00000298355 KDM2AQ9Y2K7 1162 aa22.18■■□□□ 1.14
TRIM9-201ENST00000298355 BAZ1BQ9UIG0 1483 aaKnown RBP22.17■■□□□ 1.14
TRIM9-201ENST00000298355 WRNQ14191 1432 aaPredicted RBP eCLIP22.17■■□□□ 1.14
TRIM9-201ENST00000298355 VPS8Q8N3P4 1428 aa22.14■■□□□ 1.13
TRIM9-201ENST00000298355 GOLGA6L3A6NEY3 463 aa22.13■■□□□ 1.13
TRIM9-201ENST00000298355 NUDCQ9Y266 331 aa22.12■■□□□ 1.13
TRIM9-201ENST00000298355 HSPA5P11021 654 aaKnown RBP22.11■■□□□ 1.13
TRIM9-201ENST00000298355 SETD5Q9C0A6 1442 aa22.11■■□□□ 1.13
TRIM9-201ENST00000298355 GZF1Q9H116 711 aaPredicted RBP22.08■■□□□ 1.13
TRIM9-201ENST00000298355 PKNOX2Q96KN3 472 aa22.08■■□□□ 1.13
TRIM9-201ENST00000298355 SOGA1O94964 1423 aa22.08■■□□□ 1.12
TRIM9-201ENST00000298355 RCAN3Q9UKA8 241 aa22.07■■□□□ 1.12
TRIM9-201ENST00000298355 DHX57Q6P158 1386 aaKnown RBP22.07■■□□□ 1.12
TRIM9-201ENST00000298355 IL27Q8NEV9 243 aa22.07■■□□□ 1.12
TRIM9-201ENST00000298355 SLKQ9H2G2 1235 aaPredicted RBP22.07■■□□□ 1.12
TRIM9-201ENST00000298355 PPP1R15AO75807 674 aaPredicted RBP22.06■■□□□ 1.12
TRIM9-201ENST00000298355 HSP90AB1P08238 724 aaKnown RBP22.06■■□□□ 1.12
TRIM9-201ENST00000298355 PDE4AP27815 886 aa22.05■■□□□ 1.12
TRIM9-201ENST00000298355 HSCBQ8IWL3 235 aa22.04■■□□□ 1.12
TRIM9-201ENST00000298355 SPRYD3Q8NCJ5 442 aa22.04■■□□□ 1.12
TRIM9-201ENST00000298355 RAB3GAP2Q9H2M9 1393 aa22.03■■□□□ 1.12
TRIM9-201ENST00000298355 MROH2BQ7Z745 1585 aa22.02■■□□□ 1.12
TRIM9-201ENST00000298355 MYH16Q9H6N6 1097 aa22.02■■□□□ 1.12
TRIM9-201ENST00000298355 ARID3AQ99856 593 aa21.99■■□□□ 1.11
TRIM9-201ENST00000298355 CARD11Q9BXL7 1154 aa21.98■■□□□ 1.11
TRIM9-201ENST00000298355 KANK4Q5T7N3 995 aaPredicted RBP21.96■■□□□ 1.11
TRIM9-201ENST00000298355 AMER1Q5JTC6 1135 aaPredicted RBP21.95■■□□□ 1.1
TRIM9-201ENST00000298355 SLC24A1O60721 1099 aa21.94■■□□□ 1.1
TRIM9-201ENST00000298355 SLC4A3P48751 1232 aa21.93■■□□□ 1.1
TRIM9-201ENST00000298355 CHAF1AQ13111 956 aaPredicted RBP21.93■■□□□ 1.1
TRIM9-201ENST00000298355 MSH5O43196 834 aa21.93■■□□□ 1.1
TRIM9-201ENST00000298355 PTMSP20962 102 aa21.93■■□□□ 1.1
TRIM9-201ENST00000298355 FTSJ3Q8IY81 847 aaKnown RBP21.93■■□□□ 1.1
TRIM9-201ENST00000298355 FRAT1Q92837 279 aaPredicted RBP21.93■■□□□ 1.1
TRIM9-201ENST00000298355 GBP4Q96PP9 640 aa21.92■■□□□ 1.1
TRIM9-201ENST00000298355 ZBED9Q6R2W3 1325 aa21.91■■□□□ 1.1
TRIM9-201ENST00000298355 KIF27Q86VH2 1401 aa21.9■■□□□ 1.1
TRIM9-201ENST00000298355 KNSTRNQ9Y448 316 aa21.9■■□□□ 1.1
TRIM9-201ENST00000298355 PAK3O75914 559 aaPredicted RBP21.89■■□□□ 1.1
TRIM9-201ENST00000298355 BRPF3Q9ULD4 1205 aa21.89■■□□□ 1.1
TRIM9-201ENST00000298355 MS4A1P11836 297 aa21.89■■□□□ 1.09
TRIM9-201ENST00000298355 PLCB2Q00722 1185 aa21.89■■□□□ 1.09
TRIM9-201ENST00000298355 CC2D1BQ5T0F9 858 aaKnown RBP21.85■■□□□ 1.09
TRIM9-201ENST00000298355 CCDC88BA6NC98 1476 aa21.84■■□□□ 1.09
TRIM9-201ENST00000298355 NFKBIBQ15653 356 aa21.84■■□□□ 1.09
TRIM9-201ENST00000298355 CASC1Q6TDU7 716 aa21.83■■□□□ 1.09
TRIM9-201ENST00000298355 FAM161AQ3B820 660 aa21.81■■□□□ 1.08
TRIM9-201ENST00000298355 TPRNQ4KMQ1 711 aa21.81■■□□□ 1.08
TRIM9-201ENST00000298355 EXOC6Q8TAG9 804 aa21.79■■□□□ 1.08
TRIM9-201ENST00000298355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.79■■□□□ 1.08
TRIM9-201ENST00000298355 PDE3BQ13370 1112 aa21.79■■□□□ 1.08
TRIM9-201ENST00000298355 TSPY4P0CV99 314 aa21.79■■□□□ 1.08
TRIM9-201ENST00000298355 TSPY10P0CW01 314 aa21.79■■□□□ 1.08
TRIM9-201ENST00000298355 FAM43AQ8N2R8 423 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms