RNA–Protein interactions for RNA: ENST00000296783.7

PAPD4-201, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PAPD4, Length 3,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-201ENST00000296783 EFCAB5A4FU69 1503 aa15.69■□□□□ 0.1
PAPD4-201ENST00000296783 CCNB3Q8WWL7 1395 aa15.69■□□□□ 0.1
PAPD4-201ENST00000296783 TDRD9Q8NDG6 1382 aaKnown RBP15.69■□□□□ 0.1
PAPD4-201ENST00000296783 CFAP43Q8NDM7 1665 aa15.68■□□□□ 0.1
PAPD4-201ENST00000296783 LRRC9Q6ZRR7 1453 aa15.68■□□□□ 0.1
PAPD4-201ENST00000296783 GAPVD1Q14C86 1478 aa15.68■□□□□ 0.1
PAPD4-201ENST00000296783 TARBP1Q13395 1621 aaKnown RBP15.67■□□□□ 0.1
PAPD4-201ENST00000296783 FHOD3Q2V2M9 1422 aa15.66■□□□□ 0.1
PAPD4-201ENST00000296783 P3H3Q8IVL6 736 aa15.65■□□□□ 0.1
PAPD4-201ENST00000296783 DHX57Q6P158 1386 aaKnown RBP15.64■□□□□ 0.09
PAPD4-201ENST00000296783 FYCO1Q9BQS8 1478 aa15.63■□□□□ 0.09
PAPD4-201ENST00000296783 DIEXFQ68CQ4 756 aaKnown RBP15.63■□□□□ 0.09
PAPD4-201ENST00000296783 AQRO60306 1485 aaKnown RBP eCLIP15.62■□□□□ 0.09
PAPD4-201ENST00000296783 CLSPNQ9HAW4 1339 aa15.61■□□□□ 0.09
PAPD4-201ENST00000296783 CASKIN1Q8WXD9 1431 aa15.61■□□□□ 0.09
PAPD4-201ENST00000296783 PHLDB1Q86UU1 1377 aa15.6■□□□□ 0.09
PAPD4-201ENST00000296783 ZNF316A6NFI3 1004 aaPredicted RBP15.6■□□□□ 0.09
PAPD4-201ENST00000296783 SAMD9Q5K651 1589 aa15.6■□□□□ 0.09
PAPD4-201ENST00000296783 SNAPC4Q5SXM2 1469 aa15.57■□□□□ 0.08
PAPD4-201ENST00000296783 PBRM1Q86U86 1689 aa15.56■□□□□ 0.08
PAPD4-201ENST00000296783 FMN1Q68DA7 1419 aa15.56■□□□□ 0.08
PAPD4-201ENST00000296783 MRC2Q9UBG0 1479 aa15.56■□□□□ 0.08
PAPD4-201ENST00000296783 LRRIQ1Q96JM4 1722 aa15.52■□□□□ 0.08
PAPD4-201ENST00000296783 ITGAEP38570 1179 aa15.52■□□□□ 0.08
PAPD4-201ENST00000296783 ATP1B4Q9UN42 357 aaPredicted RBP15.52■□□□□ 0.07
PAPD4-201ENST00000296783 RAB3GAP2Q9H2M9 1393 aa15.5■□□□□ 0.07
PAPD4-201ENST00000296783 ADAMTS12P58397 1594 aa15.5■□□□□ 0.07
PAPD4-201ENST00000296783 GRIN2BQ13224 1484 aa15.48■□□□□ 0.07
PAPD4-201ENST00000296783 WDR62O43379 1518 aa15.48■□□□□ 0.07
PAPD4-201ENST00000296783 THOC2Q8NI27 1593 aaKnown RBP15.46■□□□□ 0.07
PAPD4-201ENST00000296783 SETD5Q9C0A6 1442 aa15.46■□□□□ 0.06
PAPD4-201ENST00000296783 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.45■□□□□ 0.06
PAPD4-201ENST00000296783 MAPKBP1O60336 1514 aa15.45■□□□□ 0.06
PAPD4-201ENST00000296783 FAM50AQ14320 339 aaKnown RBP15.44■□□□□ 0.06
PAPD4-201ENST00000296783 IFT140Q96RY7 1462 aa15.44■□□□□ 0.06
PAPD4-201ENST00000296783 ZNF608Q9ULD9 1512 aaPredicted RBP15.44■□□□□ 0.06
PAPD4-201ENST00000296783 IQGAP2Q13576 1575 aa15.43■□□□□ 0.06
PAPD4-201ENST00000296783 FGD6Q6ZV73 1430 aa15.41■□□□□ 0.06
PAPD4-201ENST00000296783 MTUS2Q5JR59 1369 aa15.41■□□□□ 0.06
PAPD4-201ENST00000296783 SCAF1Q9H7N4 1312 aaKnown RBP15.39■□□□□ 0.05
PAPD4-201ENST00000296783 EHBP1L1Q8N3D4 1523 aa15.38■□□□□ 0.05
PAPD4-201ENST00000296783 NCOA2Q15596 1464 aa15.38■□□□□ 0.05
PAPD4-201ENST00000296783 MAGI3Q5TCQ9 1506 aa15.37■□□□□ 0.05
PAPD4-201ENST00000296783 SUPT6HQ7KZ85 1726 aaKnown RBP15.37■□□□□ 0.05
PAPD4-201ENST00000296783 ARHGEF11O15085 1522 aa15.36■□□□□ 0.05
PAPD4-201ENST00000296783 UGGT2Q9NYU1 1516 aa15.36■□□□□ 0.05
PAPD4-201ENST00000296783 EIF4G3O43432 1585 aaKnown RBP15.36■□□□□ 0.05
PAPD4-201ENST00000296783 CCDC18Q5T9S5 1454 aa15.35■□□□□ 0.05
PAPD4-201ENST00000296783 HECW1Q76N89 1606 aa15.35■□□□□ 0.05
PAPD4-201ENST00000296783 MYOM3Q5VTT5 1437 aa15.34■□□□□ 0.05
PAPD4-201ENST00000296783 ACIN1Q9UKV3 1341 aaKnown RBP15.34■□□□□ 0.05
PAPD4-201ENST00000296783 NEUROD1Q13562 356 aa15.34■□□□□ 0.05
PAPD4-201ENST00000296783 MIER1Q8N108 512 aa15.33■□□□□ 0.05
PAPD4-201ENST00000296783 PTPRKQ15262 1439 aa15.33■□□□□ 0.04
PAPD4-201ENST00000296783 EPRSP07814 1512 aaKnown RBP15.31■□□□□ 0.04
PAPD4-201ENST00000296783 ERCC6Q03468 1493 aa15.31■□□□□ 0.04
PAPD4-201ENST00000296783 KIAA0586Q9BVV6 1533 aa15.31■□□□□ 0.04
PAPD4-201ENST00000296783 GRIN2AQ12879 1464 aa15.3■□□□□ 0.04
PAPD4-201ENST00000296783 PTPN23Q9H3S7 1636 aa15.29■□□□□ 0.04
PAPD4-201ENST00000296783 DISP1Q96F81 1524 aa15.29■□□□□ 0.04
PAPD4-201ENST00000296783 KIAA0556O60303 1618 aa15.29■□□□□ 0.04
PAPD4-201ENST00000296783 HFM1A2PYH4 1435 aa15.28■□□□□ 0.04
PAPD4-201ENST00000296783 CDK13Q14004 1512 aaKnown RBP15.28■□□□□ 0.04
PAPD4-201ENST00000296783 CENPBP07199 599 aaPredicted RBP15.26■□□□□ 0.03
PAPD4-201ENST00000296783 TCOF1Q13428 1488 aaKnown RBP15.25■□□□□ 0.03
PAPD4-201ENST00000296783 SIN3AQ96ST3 1273 aa15.25■□□□□ 0.03
PAPD4-201ENST00000296783 MAGI1Q96QZ7 1491 aaPredicted RBP15.25■□□□□ 0.03
PAPD4-201ENST00000296783 NAIPQ13075 1403 aa15.24■□□□□ 0.03
PAPD4-201ENST00000296783 CEP170Q5SW79 1584 aa15.22■□□□□ 0.03
PAPD4-201ENST00000296783 UACAQ9BZF9 1416 aa15.21■□□□□ 0.03
PAPD4-201ENST00000296783 SYNJ2O15056 1496 aa15.21■□□□□ 0.03
PAPD4-201ENST00000296783 NUP153P49790 1475 aaKnown RBP15.2■□□□□ 0.02
PAPD4-201ENST00000296783 TIMELESSQ9UNS1 1208 aa15.19■□□□□ 0.02
PAPD4-201ENST00000296783 RAPGEF6Q8TEU7 1601 aa15.19■□□□□ 0.02
PAPD4-201ENST00000296783 MIA2Q96PC5 1412 aa15.19■□□□□ 0.02
PAPD4-201ENST00000296783 ARID3CA6NKF2 412 aa15.17■□□□□ 0.02
PAPD4-201ENST00000296783 GCC2Q8IWJ2 1684 aa15.17■□□□□ 0.02
PAPD4-201ENST00000296783 YTHDC1Q96MU7 727 aaKnown RBP15.17■□□□□ 0.02
PAPD4-201ENST00000296783 NUP160Q12769 1436 aa15.15■□□□□ 0.02
PAPD4-201ENST00000296783 CHMP7Q8WUX9 453 aaPredicted RBP15.15■□□□□ 0.02
PAPD4-201ENST00000296783 AKNAQ7Z591 1439 aa15.15■□□□□ 0.02
PAPD4-201ENST00000296783 GTF3C3Q9Y5Q9 886 aa15.12■□□□□ 0.01
PAPD4-201ENST00000296783 PPP1R15AO75807 674 aaPredicted RBP15.12■□□□□ 0.01
PAPD4-201ENST00000296783 KDM6BO15054 1643 aa15.11■□□□□ 0.01
PAPD4-201ENST00000296783 RRP7BPQ9NSQ0 103 aa15.11■□□□□ 0.01
PAPD4-201ENST00000296783 CHIC2Q9UKJ5 165 aa15.1■□□□□ 0.01
PAPD4-201ENST00000296783 DENND4BO75064 1496 aaPredicted RBP15.1■□□□□ 0.01
PAPD4-201ENST00000296783 PLB1Q6P1J6 1458 aa15.1■□□□□ 0.01
PAPD4-201ENST00000296783 FBLN2P98095 1184 aa15.08■□□□□ 0.01
PAPD4-201ENST00000296783 DNMT1P26358 1616 aaKnown RBP15.08■□□□□ 0
PAPD4-201ENST00000296783 JPH4Q96JJ6 628 aa15.07■□□□□ 0
PAPD4-201ENST00000296783 DAPK1P53355 1430 aa15.07■□□□□ 0
PAPD4-201ENST00000296783 TROQ12816 1431 aaPredicted RBP15.07■□□□□ 0
PAPD4-201ENST00000296783 KDM5BQ9UGL1 1544 aa15.06■□□□□ 0
PAPD4-201ENST00000296783 PRG4Q92954 1404 aaPredicted RBP15.06■□□□□ 0
PAPD4-201ENST00000296783 TONSLQ96HA7 1378 aa15.06■□□□□ 0
PAPD4-201ENST00000296783 CARMIL2Q6F5E8 1435 aa15.06■□□□□ 0
PAPD4-201ENST00000296783 CDK11AQ9UQ88 783 aaPredicted RBP15.06■□□□□ 0
PAPD4-201ENST00000296783 ABCC5O15440 1437 aa15.05■□□□□ -0
PAPD4-201ENST00000296783 ADCY10Q96PN6 1610 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms