RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 CUL7Q14999 1698 aa28.2■■■□□ 2.11
TMEM41A-201ENST00000296254 KIF27Q86VH2 1401 aa28.2■■■□□ 2.11
TMEM41A-201ENST00000296254 IGF1RP08069 1367 aa28.18■■■□□ 2.1
TMEM41A-201ENST00000296254 KIAA0586Q9BVV6 1533 aa28.18■■■□□ 2.1
TMEM41A-201ENST00000296254 AEBP2Q6ZN18 517 aaPredicted RBP28.14■■■□□ 2.1
TMEM41A-201ENST00000296254 MAPKBP1O60336 1514 aa28.13■■■□□ 2.09
TMEM41A-201ENST00000296254 ADCY10Q96PN6 1610 aa28.12■■■□□ 2.09
TMEM41A-201ENST00000296254 ABCC10Q5T3U5 1492 aa28.09■■■□□ 2.09
TMEM41A-201ENST00000296254 DIP2BQ9P265 1576 aa28.04■■■□□ 2.08
TMEM41A-201ENST00000296254 NPM1P06748 294 aaKnown RBP eCLIP28.02■■■□□ 2.08
TMEM41A-201ENST00000296254 FAM69CQ0P6D2 419 aa28■■■□□ 2.07
TMEM41A-201ENST00000296254 CARMIL1Q5VZK9 1371 aa27.99■■■□□ 2.07
TMEM41A-201ENST00000296254 PTPRGP23470 1445 aa27.9■■■□□ 2.06
TMEM41A-201ENST00000296254 IQGAP2Q13576 1575 aa27.9■■■□□ 2.06
TMEM41A-201ENST00000296254 CARMIL2Q6F5E8 1435 aa27.87■■■□□ 2.05
TMEM41A-201ENST00000296254 TNIKQ9UKE5 1360 aa27.86■■■□□ 2.05
TMEM41A-201ENST00000296254 ABCC2Q92887 1545 aa27.83■■■□□ 2.05
TMEM41A-201ENST00000296254 KDM6BO15054 1643 aa27.81■■■□□ 2.04
TMEM41A-201ENST00000296254 DISP1Q96F81 1524 aa27.77■■■□□ 2.04
TMEM41A-201ENST00000296254 UHRF1BP1LA0JNW5 1464 aa27.76■■■□□ 2.04
TMEM41A-201ENST00000296254 TTBK1Q5TCY1 1321 aaPredicted RBP27.76■■■□□ 2.03
TMEM41A-201ENST00000296254 TSPOAP1O95153 1857 aa27.76■■■□□ 2.03
TMEM41A-201ENST00000296254 RAPGEF2Q9Y4G8 1499 aa27.75■■■□□ 2.03
TMEM41A-201ENST00000296254 ASXL2Q76L83 1435 aa27.73■■■□□ 2.03
TMEM41A-201ENST00000296254 UGGT2Q9NYU1 1516 aa27.72■■■□□ 2.03
TMEM41A-201ENST00000296254 PLB1Q6P1J6 1458 aa27.71■■■□□ 2.03
TMEM41A-201ENST00000296254 UACAQ9BZF9 1416 aa27.71■■■□□ 2.03
TMEM41A-201ENST00000296254 GLI2P10070 1586 aa27.69■■■□□ 2.02
TMEM41A-201ENST00000296254 KIAA0556O60303 1618 aa27.67■■■□□ 2.02
TMEM41A-201ENST00000296254 KDM5BQ9UGL1 1544 aa27.64■■■□□ 2.02
TMEM41A-201ENST00000296254 PPRC1Q5VV67 1664 aaKnown RBP27.64■■■□□ 2.02
TMEM41A-201ENST00000296254 ZCCHC11Q5TAX3 1644 aaKnown RBP27.57■■■□□ 2
TMEM41A-201ENST00000296254 EPRSP07814 1512 aaKnown RBP27.57■■■□□ 2
TMEM41A-201ENST00000296254 CTTNBP2Q8WZ74 1663 aa27.55■■■□□ 2
TMEM41A-201ENST00000296254 KDM4FA0A1W2PPD8 638 aa27.54■■■□□ 2
TMEM41A-201ENST00000296254 MAP3K4Q9Y6R4 1608 aa27.54■■■□□ 2
TMEM41A-201ENST00000296254 GOLGA3Q08378 1498 aa27.46■■□□□ 1.99
TMEM41A-201ENST00000296254 TEX14Q8IWB6 1497 aa27.45■■□□□ 1.99
TMEM41A-201ENST00000296254 PRXQ9BXM0 1461 aa27.45■■□□□ 1.99
TMEM41A-201ENST00000296254 WDR7Q9Y4E6 1490 aa27.45■■□□□ 1.99
TMEM41A-201ENST00000296254 COL17A1Q9UMD9 1497 aaPredicted RBP27.44■■□□□ 1.98
TMEM41A-201ENST00000296254 ABCA8O94911 1581 aa27.41■■□□□ 1.98
TMEM41A-201ENST00000296254 ADGRL1O94910 1474 aa27.35■■□□□ 1.97
TMEM41A-201ENST00000296254 CFAP43Q8NDM7 1665 aa27.3■■□□□ 1.96
TMEM41A-201ENST00000296254 MAGI3Q5TCQ9 1506 aa27.29■■□□□ 1.96
TMEM41A-201ENST00000296254 CD109Q6YHK3 1445 aa27.25■■□□□ 1.95
TMEM41A-201ENST00000296254 KCNH8Q96L42 1107 aa27.18■■□□□ 1.94
TMEM41A-201ENST00000296254 SAMD9Q5K651 1589 aa27.18■■□□□ 1.94
TMEM41A-201ENST00000296254 ATP10BO94823 1461 aa27.13■■□□□ 1.93
TMEM41A-201ENST00000296254 P3H3Q8IVL6 736 aa27.1■■□□□ 1.93
TMEM41A-201ENST00000296254 CSRNP3Q8WYN3 585 aa27.1■■□□□ 1.93
TMEM41A-201ENST00000296254 FAM9AQ8IZU1 332 aaPredicted RBP27.09■■□□□ 1.93
TMEM41A-201ENST00000296254 ARID3CA6NKF2 412 aa27.08■■□□□ 1.93
TMEM41A-201ENST00000296254 ARAP3Q8WWN8 1544 aa27.07■■□□□ 1.92
TMEM41A-201ENST00000296254 ABCA9Q8IUA7 1624 aa27.07■■□□□ 1.92
TMEM41A-201ENST00000296254 RAPGEF6Q8TEU7 1601 aa27.07■■□□□ 1.92
TMEM41A-201ENST00000296254 EEA1Q15075 1411 aa27.05■■□□□ 1.92
TMEM41A-201ENST00000296254 HECW2Q9P2P5 1572 aa27.03■■□□□ 1.92
TMEM41A-201ENST00000296254 KIF21BO75037 1637 aa27.02■■□□□ 1.92
TMEM41A-201ENST00000296254 NUP153P49790 1475 aaKnown RBP26.99■■□□□ 1.91
TMEM41A-201ENST00000296254 PHLDB1Q86UU1 1377 aa26.97■■□□□ 1.91
TMEM41A-201ENST00000296254 NEO1Q92859 1461 aa26.94■■□□□ 1.9
TMEM41A-201ENST00000296254 FHOD3Q2V2M9 1422 aa26.94■■□□□ 1.9
TMEM41A-201ENST00000296254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.88■■□□□ 1.89
TMEM41A-201ENST00000296254 HNRNPUL2Q1KMD3 747 aaKnown RBP26.88■■□□□ 1.89
TMEM41A-201ENST00000296254 FRMPD1Q5SYB0 1578 aa26.88■■□□□ 1.89
TMEM41A-201ENST00000296254 EFCAB5A4FU69 1503 aa26.87■■□□□ 1.89
TMEM41A-201ENST00000296254 RANGAP1P46060 587 aaPredicted RBP26.85■■□□□ 1.89
TMEM41A-201ENST00000296254 RAPGEF3O95398 923 aa26.84■■□□□ 1.89
TMEM41A-201ENST00000296254 ILDR1Q86SU0 546 aaPredicted RBP26.82■■□□□ 1.88
TMEM41A-201ENST00000296254 ADAMTSL3P82987 1691 aa26.81■■□□□ 1.88
TMEM41A-201ENST00000296254 ARHGEF40Q8TER5 1519 aa26.76■■□□□ 1.87
TMEM41A-201ENST00000296254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.75■■□□□ 1.87
TMEM41A-201ENST00000296254 PTPRMP28827 1452 aa26.75■■□□□ 1.87
TMEM41A-201ENST00000296254 PLEKHD1A6NEE1 506 aa26.75■■□□□ 1.87
TMEM41A-201ENST00000296254 CFAP74Q9C0B2 1584 aa26.75■■□□□ 1.87
TMEM41A-201ENST00000296254 TTC37Q6PGP7 1564 aa26.74■■□□□ 1.87
TMEM41A-201ENST00000296254 BCORL1Q5H9F3 1711 aa26.73■■□□□ 1.87
TMEM41A-201ENST00000296254 RICTORQ6R327 1708 aa26.73■■□□□ 1.87
TMEM41A-201ENST00000296254 FANCAO15360 1455 aa26.73■■□□□ 1.87
TMEM41A-201ENST00000296254 DENND4BO75064 1496 aaPredicted RBP26.73■■□□□ 1.87
TMEM41A-201ENST00000296254 AKNAQ7Z591 1439 aa26.71■■□□□ 1.87
TMEM41A-201ENST00000296254 CDK13Q14004 1512 aaKnown RBP26.7■■□□□ 1.86
TMEM41A-201ENST00000296254 MADDQ8WXG6 1647 aa26.68■■□□□ 1.86
TMEM41A-201ENST00000296254 ZMYM4Q5VZL5 1548 aa26.67■■□□□ 1.86
TMEM41A-201ENST00000296254 ARID4BQ4LE39 1312 aaPredicted RBP26.64■■□□□ 1.85
TMEM41A-201ENST00000296254 HECW1Q76N89 1606 aa26.61■■□□□ 1.85
TMEM41A-201ENST00000296254 FMN1Q68DA7 1419 aa26.6■■□□□ 1.85
TMEM41A-201ENST00000296254 ZFYVE16Q7Z3T8 1539 aa26.6■■□□□ 1.85
TMEM41A-201ENST00000296254 ARHGAP35Q9NRY4 1499 aa26.59■■□□□ 1.85
TMEM41A-201ENST00000296254 PCF11O94913 1555 aaKnown RBP26.58■■□□□ 1.85
TMEM41A-201ENST00000296254 MAGI2Q86UL8 1455 aa26.57■■□□□ 1.84
TMEM41A-201ENST00000296254 PLCH2O75038 1416 aa26.56■■□□□ 1.84
TMEM41A-201ENST00000296254 YEATS2Q9ULM3 1422 aa26.56■■□□□ 1.84
TMEM41A-201ENST00000296254 RIMS1Q86UR5 1692 aaKnown RBP26.56■■□□□ 1.84
TMEM41A-201ENST00000296254 POGZQ7Z3K3 1410 aa26.56■■□□□ 1.84
TMEM41A-201ENST00000296254 UBTFP17480 764 aaKnown RBP26.55■■□□□ 1.84
TMEM41A-201ENST00000296254 LMTK3Q96Q04 1460 aa26.55■■□□□ 1.84
TMEM41A-201ENST00000296254 SIGLEC1Q9BZZ2 1709 aa26.54■■□□□ 1.84
TMEM41A-201ENST00000296254 EHMT2Q96KQ7 1210 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms