RNA–Protein interactions for RNA: ENST00000295872.8

SPICE1-201, Transcript of spindle and centriole associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPICE1, Length 5,417 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPICE1-201ENST00000295872 NEFMP07197 916 aa18.17■□□□□ 0.5
SPICE1-201ENST00000295872 CLSPNQ9HAW4 1339 aa18.17■□□□□ 0.5
SPICE1-201ENST00000295872 ACIN1Q9UKV3 1341 aaKnown RBP18.15■□□□□ 0.5
SPICE1-201ENST00000295872 WIZO95785 1651 aa18.14■□□□□ 0.49
SPICE1-201ENST00000295872 SLC24A1O60721 1099 aa18.13■□□□□ 0.49
SPICE1-201ENST00000295872 RRP7BPQ9NSQ0 103 aa18.13■□□□□ 0.49
SPICE1-201ENST00000295872 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
SPICE1-201ENST00000295872 CARMIL2Q6F5E8 1435 aa18.1■□□□□ 0.49
SPICE1-201ENST00000295872 PPP1R15AO75807 674 aaPredicted RBP18.09■□□□□ 0.49
SPICE1-201ENST00000295872 KDM2AQ9Y2K7 1162 aa18.05■□□□□ 0.48
SPICE1-201ENST00000295872 FHAD1B1AJZ9 1412 aa18.05■□□□□ 0.48
SPICE1-201ENST00000295872 DDX10Q13206 875 aaKnown RBP18.04■□□□□ 0.48
SPICE1-201ENST00000295872 ABCC8Q09428 1581 aa18.04■□□□□ 0.48
SPICE1-201ENST00000295872 FANCD2Q9BXW9 1451 aa18.02■□□□□ 0.47
SPICE1-201ENST00000295872 CCNB3Q8WWL7 1395 aa18.01■□□□□ 0.47
SPICE1-201ENST00000295872 CANXP27824 592 aaKnown RBP17.98■□□□□ 0.47
SPICE1-201ENST00000295872 RTL5Q5HYW3 569 aaPredicted RBP17.98■□□□□ 0.47
SPICE1-201ENST00000295872 SENP3Q9H4L4 574 aaPredicted RBP17.96■□□□□ 0.47
SPICE1-201ENST00000295872 C14orf37Q86TY3 774 aa17.96■□□□□ 0.47
SPICE1-201ENST00000295872 ZBTB47Q9UFB7 747 aaPredicted RBP17.94■□□□□ 0.46
SPICE1-201ENST00000295872 SCAF1Q9H7N4 1312 aaKnown RBP17.91■□□□□ 0.46
SPICE1-201ENST00000295872 NCAPD3P42695 1498 aa17.91■□□□□ 0.46
SPICE1-201ENST00000295872 HNRNPUQ00839 825 aaKnown RBP eCLIP17.9■□□□□ 0.46
SPICE1-201ENST00000295872 EIF4G2P78344 907 aaKnown RBP eCLIP17.9■□□□□ 0.46
SPICE1-201ENST00000295872 RGL3Q3MIN7 710 aa17.9■□□□□ 0.46
SPICE1-201ENST00000295872 VPS8Q8N3P4 1428 aa17.9■□□□□ 0.46
SPICE1-201ENST00000295872 MLECQ14165 292 aa17.89■□□□□ 0.45
SPICE1-201ENST00000295872 OSCARQ8IYS5 282 aa17.89■□□□□ 0.45
SPICE1-201ENST00000295872 JPH4Q96JJ6 628 aa17.88■□□□□ 0.45
SPICE1-201ENST00000295872 FAM9BQ8IZU0 186 aa17.86■□□□□ 0.45
SPICE1-201ENST00000295872 TMC1Q8TDI8 760 aa17.84■□□□□ 0.45
SPICE1-201ENST00000295872 RAPGEF2Q9Y4G8 1499 aa17.83■□□□□ 0.44
SPICE1-201ENST00000295872 FMN1Q68DA7 1419 aa17.82■□□□□ 0.44
SPICE1-201ENST00000295872 EFCAB2Q5VUJ9 269 aa17.82■□□□□ 0.44
SPICE1-201ENST00000295872 KANK1Q14678 1352 aa17.81■□□□□ 0.44
SPICE1-201ENST00000295872 FKBP8Q14318 412 aa17.8■□□□□ 0.44
SPICE1-201ENST00000295872 MIER1Q8N108 512 aa17.8■□□□□ 0.44
SPICE1-201ENST00000295872 MRS2Q9HD23 443 aa17.79■□□□□ 0.44
SPICE1-201ENST00000295872 CYB5RLQ6IPT4 315 aa17.79■□□□□ 0.44
SPICE1-201ENST00000295872 PLEKHG5O94827 1062 aa17.76■□□□□ 0.43
SPICE1-201ENST00000295872 GGT6Q6P531 493 aa17.76■□□□□ 0.43
SPICE1-201ENST00000295872 HIRIP3Q9BW71 556 aaPredicted RBP17.74■□□□□ 0.43
SPICE1-201ENST00000295872 WDR43Q15061 677 aaKnown RBP eCLIP17.73■□□□□ 0.43
SPICE1-201ENST00000295872 ARHGAP35Q9NRY4 1499 aa17.73■□□□□ 0.43
SPICE1-201ENST00000295872 ZBTB7CA1YPR0 619 aa17.73■□□□□ 0.43
SPICE1-201ENST00000295872 HDGFP51858 240 aaKnown RBP17.72■□□□□ 0.43
SPICE1-201ENST00000295872 HAP1P54257 671 aaPredicted RBP17.72■□□□□ 0.43
SPICE1-201ENST00000295872 CC2D2AQ9P2K1 1620 aa17.71■□□□□ 0.43
SPICE1-201ENST00000295872 ANP32AP39687 249 aaKnown RBP17.7■□□□□ 0.42
SPICE1-201ENST00000295872 BCL11AQ9H165 835 aa17.7■□□□□ 0.42
SPICE1-201ENST00000295872 FGD5Q6ZNL6 1462 aa17.7■□□□□ 0.42
SPICE1-201ENST00000295872 TIMELESSQ9UNS1 1208 aa17.7■□□□□ 0.42
SPICE1-201ENST00000295872 GAPVD1Q14C86 1478 aa17.69■□□□□ 0.42
SPICE1-201ENST00000295872 PTPRGP23470 1445 aa17.69■□□□□ 0.42
SPICE1-201ENST00000295872 POGKQ9P215 609 aa17.68■□□□□ 0.42
SPICE1-201ENST00000295872 FHOD3Q2V2M9 1422 aa17.68■□□□□ 0.42
SPICE1-201ENST00000295872 A0A0G2JS52 829 aa17.68■□□□□ 0.42
SPICE1-201ENST00000295872 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.67■□□□□ 0.42
SPICE1-201ENST00000295872 SETD5Q9C0A6 1442 aa17.67■□□□□ 0.42
SPICE1-201ENST00000295872 CDCA8Q53HL2 280 aa17.66■□□□□ 0.42
SPICE1-201ENST00000295872 SIN3AQ96ST3 1273 aa17.66■□□□□ 0.42
SPICE1-201ENST00000295872 RAD54L2Q9Y4B4 1467 aa17.65■□□□□ 0.42
SPICE1-201ENST00000295872 KANK4Q5T7N3 995 aaPredicted RBP17.65■□□□□ 0.42
SPICE1-201ENST00000295872 SALL2Q9Y467 1007 aaPredicted RBP17.65■□□□□ 0.42
SPICE1-201ENST00000295872 CARD11Q9BXL7 1154 aa17.63■□□□□ 0.41
SPICE1-201ENST00000295872 AQRO60306 1485 aaKnown RBP eCLIP17.6■□□□□ 0.41
SPICE1-201ENST00000295872 LMOD2Q6P5Q4 547 aa17.59■□□□□ 0.41
SPICE1-201ENST00000295872 NESP48681 1621 aa17.59■□□□□ 0.41
SPICE1-201ENST00000295872 SPAG9O60271 1321 aaKnown RBP17.58■□□□□ 0.41
SPICE1-201ENST00000295872 CCDC136Q96JN2 1154 aa17.58■□□□□ 0.41
SPICE1-201ENST00000295872 CCDC18Q5T9S5 1454 aa17.58■□□□□ 0.4
SPICE1-201ENST00000295872 RSPH4AQ5TD94 716 aa17.58■□□□□ 0.4
SPICE1-201ENST00000295872 MRC2Q9UBG0 1479 aa17.57■□□□□ 0.4
SPICE1-201ENST00000295872 KIF3BO15066 747 aa17.57■□□□□ 0.4
SPICE1-201ENST00000295872 HNRNPMP52272 730 aaKnown RBP eCLIP17.57■□□□□ 0.4
SPICE1-201ENST00000295872 ANKRD30AQ9BXX3 1397 aa17.56■□□□□ 0.4
SPICE1-201ENST00000295872 NPM2Q86SE8 214 aaKnown RBP17.56■□□□□ 0.4
SPICE1-201ENST00000295872 CFTRP13569 1480 aa17.55■□□□□ 0.4
SPICE1-201ENST00000295872 IGF1RP08069 1367 aa17.55■□□□□ 0.4
SPICE1-201ENST00000295872 HMGXB3Q12766 1538 aa17.55■□□□□ 0.4
SPICE1-201ENST00000295872 DCAF11Q8TEB1 546 aa17.54■□□□□ 0.4
SPICE1-201ENST00000295872 DNAJC5BQ9UF47 199 aa17.54■□□□□ 0.4
SPICE1-201ENST00000295872 KNSTRNQ9Y448 316 aa17.53■□□□□ 0.4
SPICE1-201ENST00000295872 PKD2Q13563 968 aa17.52■□□□□ 0.4
SPICE1-201ENST00000295872 UPF2Q9HAU5 1272 aaKnown RBP17.51■□□□□ 0.39
SPICE1-201ENST00000295872 GRIN2BQ13224 1484 aa17.51■□□□□ 0.39
SPICE1-201ENST00000295872 RUSC2Q8N2Y8 1516 aa17.51■□□□□ 0.39
SPICE1-201ENST00000295872 CFAP53Q96M91 514 aa17.5■□□□□ 0.39
SPICE1-201ENST00000295872 RAB3GAP2Q9H2M9 1393 aa17.5■□□□□ 0.39
SPICE1-201ENST00000295872 NUP155O75694 1391 aa17.49■□□□□ 0.39
SPICE1-201ENST00000295872 PPM1GO15355 546 aaPredicted RBP17.49■□□□□ 0.39
SPICE1-201ENST00000295872 FAM69CQ0P6D2 419 aa17.48■□□□□ 0.39
SPICE1-201ENST00000295872 WASHC2CQ9Y4E1 1318 aa17.48■□□□□ 0.39
SPICE1-201ENST00000295872 IFT140Q96RY7 1462 aa17.47■□□□□ 0.39
SPICE1-201ENST00000295872 BICRAQ9NZM4 1560 aa17.43■□□□□ 0.38
SPICE1-201ENST00000295872 EID1Q9Y6B2 187 aa17.42■□□□□ 0.38
SPICE1-201ENST00000295872 SRPK2P78362 688 aaKnown RBP17.42■□□□□ 0.38
SPICE1-201ENST00000295872 STK26Q9P289 416 aa17.42■□□□□ 0.38
SPICE1-201ENST00000295872 SAFB2Q14151 953 aaKnown RBP eCLIP17.41■□□□□ 0.38
SPICE1-201ENST00000295872 TMF1P82094 1093 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms