RNA–Protein interactions for RNA: ENST00000295317.3

RNF149-201, Transcript of ring finger protein 149, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF149, Length 2,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149-201ENST00000295317 TIAM1Q13009 1591 aa32.21■■■□□ 2.75
RNF149-201ENST00000295317 RRBP1Q9P2E9 1410 aaKnown RBP32.2■■■□□ 2.75
RNF149-201ENST00000295317 PCF11O94913 1555 aaKnown RBP32.19■■■□□ 2.74
RNF149-201ENST00000295317 CCNB3Q8WWL7 1395 aa32.19■■■□□ 2.74
RNF149-201ENST00000295317 AQRO60306 1485 aaKnown RBP eCLIP32.16■■■□□ 2.741e-6■■■■□ 22.4
RNF149-201ENST00000295317 TARBP1Q13395 1621 aaKnown RBP32.15■■■□□ 2.74
RNF149-201ENST00000295317 FHAD1B1AJZ9 1412 aa32.14■■■□□ 2.74
RNF149-201ENST00000295317 LRRC9Q6ZRR7 1453 aa32.12■■■□□ 2.73
RNF149-201ENST00000295317 CTTNBP2Q8WZ74 1663 aa32.12■■■□□ 2.73
RNF149-201ENST00000295317 PHLDB1Q86UU1 1377 aa32.1■■■□□ 2.73
RNF149-201ENST00000295317 MRC2Q9UBG0 1479 aa32.06■■■□□ 2.72
RNF149-201ENST00000295317 DIEXFQ68CQ4 756 aaKnown RBP32.04■■■□□ 2.72
RNF149-201ENST00000295317 DHX57Q6P158 1386 aaKnown RBP32.03■■■□□ 2.72
RNF149-201ENST00000295317 FAM50AQ14320 339 aaKnown RBP32.03■■■□□ 2.72
RNF149-201ENST00000295317 EFCAB5A4FU69 1503 aa32.02■■■□□ 2.72
RNF149-201ENST00000295317 MAP3K1Q13233 1512 aa32.01■■■□□ 2.71
RNF149-201ENST00000295317 ZNF608Q9ULD9 1512 aaPredicted RBP31.98■■■□□ 2.71
RNF149-201ENST00000295317 CASKIN1Q8WXD9 1431 aa31.97■■■□□ 2.71
RNF149-201ENST00000295317 FYCO1Q9BQS8 1478 aa31.95■■■□□ 2.7
RNF149-201ENST00000295317 ZNF316A6NFI3 1004 aaPredicted RBP31.94■■■□□ 2.7
RNF149-201ENST00000295317 CFAP43Q8NDM7 1665 aa31.94■■■□□ 2.7
RNF149-201ENST00000295317 PBRM1Q86U86 1689 aa31.9■■■□□ 2.7
RNF149-201ENST00000295317 FMN1Q68DA7 1419 aa31.9■■■□□ 2.7
RNF149-201ENST00000295317 SNAPC4Q5SXM2 1469 aa31.88■■■□□ 2.69
RNF149-201ENST00000295317 SAMD9Q5K651 1589 aa31.85■■■□□ 2.69
RNF149-201ENST00000295317 RAB3GAP2Q9H2M9 1393 aa31.84■■■□□ 2.69
RNF149-201ENST00000295317 ARID3CA6NKF2 412 aa31.84■■■□□ 2.69
RNF149-201ENST00000295317 ERCC6Q03468 1493 aa31.83■■■□□ 2.69
RNF149-201ENST00000295317 GRIN2BQ13224 1484 aa31.8■■■□□ 2.68
RNF149-201ENST00000295317 ADAMTS12P58397 1594 aa31.79■■■□□ 2.68
RNF149-201ENST00000295317 MTUS2Q5JR59 1369 aa31.79■■■□□ 2.68
RNF149-201ENST00000295317 WDR62O43379 1518 aa31.77■■■□□ 2.68
RNF149-201ENST00000295317 LRRIQ1Q96JM4 1722 aa31.76■■■□□ 2.68
RNF149-201ENST00000295317 IFT140Q96RY7 1462 aa31.75■■■□□ 2.67
RNF149-201ENST00000295317 CLSPNQ9HAW4 1339 aa31.69■■■□□ 2.66
RNF149-201ENST00000295317 IQGAP2Q13576 1575 aa31.69■■■□□ 2.66
RNF149-201ENST00000295317 SETD5Q9C0A6 1442 aa31.68■■■□□ 2.66
RNF149-201ENST00000295317 FBLN2P98095 1184 aa31.63■■■□□ 2.65
RNF149-201ENST00000295317 FGD6Q6ZV73 1430 aa31.62■■■□□ 2.65
RNF149-201ENST00000295317 EIF4G3O43432 1585 aaKnown RBP31.61■■■□□ 2.65
RNF149-201ENST00000295317 MAGI3Q5TCQ9 1506 aa31.59■■■□□ 2.65
RNF149-201ENST00000295317 NCOA2Q15596 1464 aa31.59■■■□□ 2.65
RNF149-201ENST00000295317 MAPKBP1O60336 1514 aa31.56■■■□□ 2.64
RNF149-201ENST00000295317 SIN3AQ96ST3 1273 aa31.54■■■□□ 2.64
RNF149-201ENST00000295317 THOC2Q8NI27 1593 aaKnown RBP31.54■■■□□ 2.64
RNF149-201ENST00000295317 PTPRKQ15262 1439 aa31.53■■■□□ 2.64
RNF149-201ENST00000295317 CDK13Q14004 1512 aaKnown RBP31.53■■■□□ 2.64
RNF149-201ENST00000295317 NEUROD1Q13562 356 aa31.52■■■□□ 2.64
RNF149-201ENST00000295317 MIER1Q8N108 512 aa31.52■■■□□ 2.64
RNF149-201ENST00000295317 CHMP7Q8WUX9 453 aaPredicted RBP31.51■■■□□ 2.64
RNF149-201ENST00000295317 GRIN2AQ12879 1464 aa31.5■■■□□ 2.63
RNF149-201ENST00000295317 MYOM3Q5VTT5 1437 aa31.47■■■□□ 2.63
RNF149-201ENST00000295317 EPRSP07814 1512 aaKnown RBP31.45■■■□□ 2.63
RNF149-201ENST00000295317 KIAA0586Q9BVV6 1533 aa31.45■■■□□ 2.62
RNF149-201ENST00000295317 UGGT2Q9NYU1 1516 aa31.44■■■□□ 2.62
RNF149-201ENST00000295317 SCAF1Q9H7N4 1312 aaKnown RBP31.43■■■□□ 2.62
RNF149-201ENST00000295317 DISP1Q96F81 1524 aa31.43■■■□□ 2.62
RNF149-201ENST00000295317 EHBP1L1Q8N3D4 1523 aa31.43■■■□□ 2.62
RNF149-201ENST00000295317 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.42■■■□□ 2.62
RNF149-201ENST00000295317 SUPT6HQ7KZ85 1726 aaKnown RBP31.42■■■□□ 2.62
RNF149-201ENST00000295317 CHIC2Q9UKJ5 165 aa31.41■■■□□ 2.62
RNF149-201ENST00000295317 HECW1Q76N89 1606 aa31.41■■■□□ 2.62
RNF149-201ENST00000295317 YTHDC1Q96MU7 727 aaKnown RBP31.4■■■□□ 2.62
RNF149-201ENST00000295317 CCDC18Q5T9S5 1454 aa31.38■■■□□ 2.61
RNF149-201ENST00000295317 KIAA0556O60303 1618 aa31.35■■■□□ 2.61
RNF149-201ENST00000295317 RRP7BPQ9NSQ0 103 aa31.34■■■□□ 2.61
RNF149-201ENST00000295317 CEP170Q5SW79 1584 aa31.33■■■□□ 2.61
RNF149-201ENST00000295317 MAGI1Q96QZ7 1491 aaPredicted RBP31.31■■■□□ 2.6
RNF149-201ENST00000295317 PTPN23Q9H3S7 1636 aa31.31■■■□□ 2.6
RNF149-201ENST00000295317 ARHGEF11O15085 1522 aa31.3■■■□□ 2.6
RNF149-201ENST00000295317 SYNJ2O15056 1496 aa31.3■■■□□ 2.6
RNF149-201ENST00000295317 ACIN1Q9UKV3 1341 aaKnown RBP31.28■■■□□ 2.6
RNF149-201ENST00000295317 NUP153P49790 1475 aaKnown RBP31.26■■■□□ 2.59
RNF149-201ENST00000295317 HFM1A2PYH4 1435 aa31.25■■■□□ 2.59
RNF149-201ENST00000295317 NAIPQ13075 1403 aa31.25■■■□□ 2.59
RNF149-201ENST00000295317 JPH4Q96JJ6 628 aa31.24■■■□□ 2.59
RNF149-201ENST00000295317 PLB1Q6P1J6 1458 aa31.22■■■□□ 2.59
RNF149-201ENST00000295317 ZNF644Q9H582 1327 aaPredicted RBP31.21■■■□□ 2.59
RNF149-201ENST00000295317 RAPGEF6Q8TEU7 1601 aa31.16■■■□□ 2.58
RNF149-201ENST00000295317 HIRIP3Q9BW71 556 aaPredicted RBP31.14■■■□□ 2.58
RNF149-201ENST00000295317 CENPBP07199 599 aaPredicted RBP31.14■■■□□ 2.57
RNF149-201ENST00000295317 PRG4Q92954 1404 aaPredicted RBP31.14■■■□□ 2.57
RNF149-201ENST00000295317 NUP160Q12769 1436 aa31.11■■■□□ 2.57
RNF149-201ENST00000295317 TCOF1Q13428 1488 aaKnown RBP31.11■■■□□ 2.57
RNF149-201ENST00000295317 UACAQ9BZF9 1416 aa31.1■■■□□ 2.57
RNF149-201ENST00000295317 TRIM52Q96A61 297 aa31.08■■■□□ 2.57
RNF149-201ENST00000295317 KDM6BO15054 1643 aa31.06■■■□□ 2.56
RNF149-201ENST00000295317 CDK11AQ9UQ88 783 aaPredicted RBP31.05■■■□□ 2.56
RNF149-201ENST00000295317 MIA2Q96PC5 1412 aa31.04■■■□□ 2.56
RNF149-201ENST00000295317 CARMIL2Q6F5E8 1435 aa31.03■■■□□ 2.56
RNF149-201ENST00000295317 PPP1R15AO75807 674 aaPredicted RBP31.03■■■□□ 2.56
RNF149-201ENST00000295317 ZNF777Q9ULD5 760 aaPredicted RBP31.02■■■□□ 2.56
RNF149-201ENST00000295317 FOXD1Q16676 465 aa31■■■□□ 2.55
RNF149-201ENST00000295317 GTF3C3Q9Y5Q9 886 aa30.99■■■□□ 2.55
RNF149-201ENST00000295317 TONSLQ96HA7 1378 aa30.97■■■□□ 2.55
RNF149-201ENST00000295317 TROQ12816 1431 aaPredicted RBP30.95■■■□□ 2.54
RNF149-201ENST00000295317 CFDP1Q9UEE9 299 aaPredicted RBP30.94■■■□□ 2.54
RNF149-201ENST00000295317 DAPK1P53355 1430 aa30.93■■■□□ 2.54
RNF149-201ENST00000295317 ABCC5O15440 1437 aa30.93■■■□□ 2.54
RNF149-201ENST00000295317 KIF14Q15058 1648 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms