RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 FBLN2P98095 1184 aa9.37□□□□□ -0.91
VCAM1-201ENST00000294728 AEBP2Q6ZN18 517 aaPredicted RBP9.37□□□□□ -0.91
VCAM1-201ENST00000294728 VPS8Q8N3P4 1428 aa9.36□□□□□ -0.91
VCAM1-201ENST00000294728 ABCA5Q8WWZ7 1642 aa9.36□□□□□ -0.91
VCAM1-201ENST00000294728 RUSC2Q8N2Y8 1516 aa9.35□□□□□ -0.91
VCAM1-201ENST00000294728 SCAF1Q9H7N4 1312 aaKnown RBP9.34□□□□□ -0.91
VCAM1-201ENST00000294728 CCER1Q8TC90 406 aaPredicted RBP9.33□□□□□ -0.92
VCAM1-201ENST00000294728 SHROOM2Q13796 1616 aa9.33□□□□□ -0.92
VCAM1-201ENST00000294728 CHMP7Q8WUX9 453 aaPredicted RBP9.33□□□□□ -0.92
VCAM1-201ENST00000294728 CLSPNQ9HAW4 1339 aa9.33□□□□□ -0.92
VCAM1-201ENST00000294728 ABCA10Q8WWZ4 1543 aa9.32□□□□□ -0.92
VCAM1-201ENST00000294728 ACIN1Q9UKV3 1341 aaKnown RBP9.31□□□□□ -0.92
VCAM1-201ENST00000294728 CLIP1P30622 1438 aa9.3□□□□□ -0.92
VCAM1-201ENST00000294728 KIF13AQ9H1H9 1805 aa9.3□□□□□ -0.92
VCAM1-201ENST00000294728 PRXQ9BXM0 1461 aa9.3□□□□□ -0.92
VCAM1-201ENST00000294728 CEP170Q5SW79 1584 aa9.29□□□□□ -0.92
VCAM1-201ENST00000294728 ERCC6L2Q5T890 1561 aa9.29□□□□□ -0.92
VCAM1-201ENST00000294728 NUP160Q12769 1436 aa9.29□□□□□ -0.92
VCAM1-201ENST00000294728 ADAMTS12P58397 1594 aa9.29□□□□□ -0.92
VCAM1-201ENST00000294728 GRIN2AQ12879 1464 aa9.28□□□□□ -0.92
VCAM1-201ENST00000294728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.28□□□□□ -0.92
VCAM1-201ENST00000294728 CENPBP07199 599 aaPredicted RBP9.27□□□□□ -0.93
VCAM1-201ENST00000294728 DIEXFQ68CQ4 756 aaKnown RBP9.27□□□□□ -0.93
VCAM1-201ENST00000294728 MAP3K1Q13233 1512 aa9.26□□□□□ -0.93
VCAM1-201ENST00000294728 ZNF316A6NFI3 1004 aaPredicted RBP9.25□□□□□ -0.93
VCAM1-201ENST00000294728 RAPGEF2Q9Y4G8 1499 aa9.24□□□□□ -0.93
VCAM1-201ENST00000294728 UBTFP17480 764 aaKnown RBP9.22□□□□□ -0.93
VCAM1-201ENST00000294728 RRBP1Q9P2E9 1410 aaKnown RBP9.22□□□□□ -0.93
VCAM1-201ENST00000294728 FHAD1B1AJZ9 1412 aa9.21□□□□□ -0.94
VCAM1-201ENST00000294728 MAPKBP1O60336 1514 aa9.2□□□□□ -0.94
VCAM1-201ENST00000294728 MYT1Q01538 1121 aa9.2□□□□□ -0.94
VCAM1-201ENST00000294728 ABCC10Q5T3U5 1492 aa9.19□□□□□ -0.94
VCAM1-201ENST00000294728 DIP2BQ9P265 1576 aa9.18□□□□□ -0.94
VCAM1-201ENST00000294728 NEUROD1Q13562 356 aa9.18□□□□□ -0.94
VCAM1-201ENST00000294728 KIF27Q86VH2 1401 aa9.17□□□□□ -0.94
VCAM1-201ENST00000294728 EHMT2Q96KQ7 1210 aa9.15□□□□□ -0.95
VCAM1-201ENST00000294728 PRG4Q92954 1404 aaPredicted RBP9.14□□□□□ -0.95
VCAM1-201ENST00000294728 ADCY10Q96PN6 1610 aa9.14□□□□□ -0.95
VCAM1-201ENST00000294728 KDM6BO15054 1643 aa9.13□□□□□ -0.95
VCAM1-201ENST00000294728 CFAP43Q8NDM7 1665 aa9.12□□□□□ -0.95
VCAM1-201ENST00000294728 DHX57Q6P158 1386 aaKnown RBP9.12□□□□□ -0.95
VCAM1-201ENST00000294728 APLP2Q06481 763 aa9.11□□□□□ -0.95
VCAM1-201ENST00000294728 ARHGAP35Q9NRY4 1499 aa9.1□□□□□ -0.95
VCAM1-201ENST00000294728 KDM4FA0A1W2PPD8 638 aa9.09□□□□□ -0.95
VCAM1-201ENST00000294728 TIAM1Q13009 1591 aa9.09□□□□□ -0.95
VCAM1-201ENST00000294728 GTF3C3Q9Y5Q9 886 aa9.08□□□□□ -0.96
VCAM1-201ENST00000294728 JPH4Q96JJ6 628 aa9.08□□□□□ -0.96
VCAM1-201ENST00000294728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.07□□□□□ -0.96
VCAM1-201ENST00000294728 FAM69CQ0P6D2 419 aa9.07□□□□□ -0.96
VCAM1-201ENST00000294728 GLI2P10070 1586 aa9.07□□□□□ -0.96
VCAM1-201ENST00000294728 PPRC1Q5VV67 1664 aaKnown RBP9.07□□□□□ -0.96
VCAM1-201ENST00000294728 EFCAB5A4FU69 1503 aa9.06□□□□□ -0.96
VCAM1-201ENST00000294728 KIAA0586Q9BVV6 1533 aa9.05□□□□□ -0.96
VCAM1-201ENST00000294728 CCNB3Q8WWL7 1395 aa9.05□□□□□ -0.96
VCAM1-201ENST00000294728 CUL7Q14999 1698 aa9.04□□□□□ -0.96
VCAM1-201ENST00000294728 TSPOAP1O95153 1857 aa9.03□□□□□ -0.96
VCAM1-201ENST00000294728 NPM1P06748 294 aaKnown RBP eCLIP9.03□□□□□ -0.96
VCAM1-201ENST00000294728 TIMELESSQ9UNS1 1208 aa9.03□□□□□ -0.96
VCAM1-201ENST00000294728 ILDR1Q86SU0 546 aaPredicted RBP9.02□□□□□ -0.97
VCAM1-201ENST00000294728 IGF1RP08069 1367 aa9.02□□□□□ -0.97
VCAM1-201ENST00000294728 CTTNBP2Q8WZ74 1663 aa9.01□□□□□ -0.97
VCAM1-201ENST00000294728 LRRC9Q6ZRR7 1453 aa9.01□□□□□ -0.97
VCAM1-201ENST00000294728 UHRF1BP1LA0JNW5 1464 aa9.01□□□□□ -0.97
VCAM1-201ENST00000294728 MIER1Q8N108 512 aa9.01□□□□□ -0.97
VCAM1-201ENST00000294728 FYCO1Q9BQS8 1478 aa9□□□□□ -0.97
VCAM1-201ENST00000294728 ABCC2Q92887 1545 aa9□□□□□ -0.97
VCAM1-201ENST00000294728 MAP3K4Q9Y6R4 1608 aa9□□□□□ -0.97
VCAM1-201ENST00000294728 HNRNPUL2Q1KMD3 747 aaKnown RBP9□□□□□ -0.97
VCAM1-201ENST00000294728 ADGRL1O94910 1474 aa9□□□□□ -0.97
VCAM1-201ENST00000294728 PLB1Q6P1J6 1458 aa8.99□□□□□ -0.97
VCAM1-201ENST00000294728 HECW2Q9P2P5 1572 aa8.97□□□□□ -0.97
VCAM1-201ENST00000294728 KANK4Q5T7N3 995 aaPredicted RBP8.96□□□□□ -0.97
VCAM1-201ENST00000294728 ASXL2Q76L83 1435 aa8.96□□□□□ -0.98
VCAM1-201ENST00000294728 PTPRGP23470 1445 aa8.96□□□□□ -0.98
VCAM1-201ENST00000294728 SETD5Q9C0A6 1442 aa8.96□□□□□ -0.98
VCAM1-201ENST00000294728 PCF11O94913 1555 aaKnown RBP8.95□□□□□ -0.98
VCAM1-201ENST00000294728 CASKIN1Q8WXD9 1431 aa8.95□□□□□ -0.98
VCAM1-201ENST00000294728 CARMIL1Q5VZK9 1371 aa8.95□□□□□ -0.98
VCAM1-201ENST00000294728 SAMD9Q5K651 1589 aa8.94□□□□□ -0.98
VCAM1-201ENST00000294728 EPRSP07814 1512 aaKnown RBP8.94□□□□□ -0.98
VCAM1-201ENST00000294728 KDM5BQ9UGL1 1544 aa8.94□□□□□ -0.98
VCAM1-201ENST00000294728 TEX14Q8IWB6 1497 aa8.94□□□□□ -0.98
VCAM1-201ENST00000294728 COL17A1Q9UMD9 1497 aaPredicted RBP8.94□□□□□ -0.98
VCAM1-201ENST00000294728 TTBK1Q5TCY1 1321 aaPredicted RBP8.93□□□□□ -0.98
VCAM1-201ENST00000294728 IQGAP2Q13576 1575 aa8.93□□□□□ -0.98
VCAM1-201ENST00000294728 CARMIL2Q6F5E8 1435 aa8.93□□□□□ -0.98
VCAM1-201ENST00000294728 RAB3GAP2Q9H2M9 1393 aa8.92□□□□□ -0.98
VCAM1-201ENST00000294728 ZCCHC11Q5TAX3 1644 aaKnown RBP8.92□□□□□ -0.98
VCAM1-201ENST00000294728 UACAQ9BZF9 1416 aa8.91□□□□□ -0.98
VCAM1-201ENST00000294728 DISP1Q96F81 1524 aa8.91□□□□□ -0.98
VCAM1-201ENST00000294728 UGGT2Q9NYU1 1516 aa8.9□□□□□ -0.98
VCAM1-201ENST00000294728 FMN1Q68DA7 1419 aa8.9□□□□□ -0.99
VCAM1-201ENST00000294728 PHLDB1Q86UU1 1377 aa8.88□□□□□ -0.99
VCAM1-201ENST00000294728 MAGI3Q5TCQ9 1506 aa8.87□□□□□ -0.99
VCAM1-201ENST00000294728 KIAA0556O60303 1618 aa8.87□□□□□ -0.99
VCAM1-201ENST00000294728 AKNAQ7Z591 1439 aa8.87□□□□□ -0.99
VCAM1-201ENST00000294728 GCC2Q8IWJ2 1684 aa8.86□□□□□ -0.99
VCAM1-201ENST00000294728 LRRIQ1Q96JM4 1722 aa8.86□□□□□ -0.99
VCAM1-201ENST00000294728 WDR7Q9Y4E6 1490 aa8.86□□□□□ -0.99
VCAM1-201ENST00000294728 HFM1A2PYH4 1435 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms