RNA–Protein interactions for RNA: ENST00000293725.9

ZNF563-201, Transcript of zinc finger protein 563, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF563, Length 2,754 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF563-201ENST00000293725 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
ZNF563-201ENST00000293725 PEG3Q9GZU2 1588 aa21.72■■□□□ 1.07
ZNF563-201ENST00000293725 SETD5Q9C0A6 1442 aa21.69■■□□□ 1.06
ZNF563-201ENST00000293725 CDK11AQ9UQ88 783 aaPredicted RBP21.69■■□□□ 1.06
ZNF563-201ENST00000293725 IRX6P78412 446 aaPredicted RBP21.67■■□□□ 1.06
ZNF563-201ENST00000293725 ARHGAP35Q9NRY4 1499 aa21.63■■□□□ 1.05
ZNF563-201ENST00000293725 BIVM-ERCC5R4GMW8 1640 aa21.59■■□□□ 1.05
ZNF563-201ENST00000293725 FAM50AQ14320 339 aaKnown RBP21.59■■□□□ 1.05
ZNF563-201ENST00000293725 ATAD2BQ9ULI0 1458 aa21.59■■□□□ 1.05
ZNF563-201ENST00000293725 HNRNPUQ00839 825 aaKnown RBP eCLIP21.58■■□□□ 1.04
ZNF563-201ENST00000293725 TIMELESSQ9UNS1 1208 aa21.57■■□□□ 1.04
ZNF563-201ENST00000293725 KIF27Q86VH2 1401 aa21.52■■□□□ 1.04
ZNF563-201ENST00000293725 PHLDB1Q86UU1 1377 aa21.51■■□□□ 1.03
ZNF563-201ENST00000293725 TIAM1Q13009 1591 aa21.51■■□□□ 1.03
ZNF563-201ENST00000293725 BICRAQ9NZM4 1560 aa21.51■■□□□ 1.03
ZNF563-201ENST00000293725 DEKP35659 375 aaKnown RBP21.51■■□□□ 1.03
ZNF563-201ENST00000293725 MYT1LQ9UL68 1186 aa21.49■■□□□ 1.03
ZNF563-201ENST00000293725 LRRC9Q6ZRR7 1453 aa21.45■■□□□ 1.02
ZNF563-201ENST00000293725 TONSLQ96HA7 1378 aa21.44■■□□□ 1.02
ZNF563-201ENST00000293725 PPP4R2Q9NY27 417 aa21.43■■□□□ 1.02
ZNF563-201ENST00000293725 MAP3K1Q13233 1512 aa21.42■■□□□ 1.02
ZNF563-201ENST00000293725 CUX1P39880 1505 aa21.41■■□□□ 1.02
ZNF563-201ENST00000293725 PRKCSHP14314 528 aaPredicted RBP21.4■■□□□ 1.02
ZNF563-201ENST00000293725 ERICH6BQ5W0A0 696 aa21.38■■□□□ 1.01
ZNF563-201ENST00000293725 B4GALNT3Q6L9W6 998 aa21.36■■□□□ 1.01
ZNF563-201ENST00000293725 ATP1B4Q9UN42 357 aaPredicted RBP21.36■■□□□ 1.01
ZNF563-201ENST00000293725 NBR1Q14596 966 aa21.35■■□□□ 1.01
ZNF563-201ENST00000293725 NOP58Q9Y2X3 529 aaKnown RBP21.32■■□□□ 1
ZNF563-201ENST00000293725 P3H3Q8IVL6 736 aa21.28■■□□□ 1
ZNF563-201ENST00000293725 PAK3O75914 559 aaPredicted RBP21.27■■□□□ 1
ZNF563-201ENST00000293725 CCDC184Q52MB2 194 aa21.26■□□□□ 0.99
ZNF563-201ENST00000293725 FHAD1B1AJZ9 1412 aa21.25■□□□□ 0.99
ZNF563-201ENST00000293725 WASHC2AQ641Q2 1341 aa21.24■□□□□ 0.99
ZNF563-201ENST00000293725 CFAP43Q8NDM7 1665 aa21.23■□□□□ 0.99
ZNF563-201ENST00000293725 IGF1RP08069 1367 aa21.23■□□□□ 0.99
ZNF563-201ENST00000293725 CCDC18Q5T9S5 1454 aa21.22■□□□□ 0.99
ZNF563-201ENST00000293725 PCF11O94913 1555 aaKnown RBP21.22■□□□□ 0.99
ZNF563-201ENST00000293725 FAM9BQ8IZU0 186 aa21.22■□□□□ 0.99
ZNF563-201ENST00000293725 HSPA5P11021 654 aaKnown RBP21.2■□□□□ 0.98
ZNF563-201ENST00000293725 UACAQ9BZF9 1416 aa21.18■□□□□ 0.98
ZNF563-201ENST00000293725 CARMIL1Q5VZK9 1371 aa21.17■□□□□ 0.98
ZNF563-201ENST00000293725 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.17■□□□□ 0.98
ZNF563-201ENST00000293725 ANO8Q9HCE9 1232 aaPredicted RBP21.15■□□□□ 0.98
ZNF563-201ENST00000293725 MRS2Q9HD23 443 aa21.14■□□□□ 0.98
ZNF563-201ENST00000293725 ZBED9Q6R2W3 1325 aa21.14■□□□□ 0.97
ZNF563-201ENST00000293725 KDM5BQ9UGL1 1544 aa21.13■□□□□ 0.97
ZNF563-201ENST00000293725 CNTLNQ9NXG0 1405 aa21.12■□□□□ 0.97
ZNF563-201ENST00000293725 RTL5Q5HYW3 569 aaPredicted RBP21.12■□□□□ 0.97
ZNF563-201ENST00000293725 FGD6Q6ZV73 1430 aa21.11■□□□□ 0.97
ZNF563-201ENST00000293725 FHOD3Q2V2M9 1422 aa21.11■□□□□ 0.97
ZNF563-201ENST00000293725 ANP32AP39687 249 aaKnown RBP21.1■□□□□ 0.97
ZNF563-201ENST00000293725 PRKRIP1Q9H875 184 aaPredicted RBP21.1■□□□□ 0.97
ZNF563-201ENST00000293725 HFM1A2PYH4 1435 aa21.1■□□□□ 0.97
ZNF563-201ENST00000293725 PTPRKQ15262 1439 aa21.1■□□□□ 0.97
ZNF563-201ENST00000293725 EIF4G2P78344 907 aaKnown RBP eCLIP21.09■□□□□ 0.97
ZNF563-201ENST00000293725 PTPN23Q9H3S7 1636 aa21.08■□□□□ 0.97
ZNF563-201ENST00000293725 IPO9Q96P70 1041 aaKnown RBP21.08■□□□□ 0.97
ZNF563-201ENST00000293725 NCOA2Q15596 1464 aa21.08■□□□□ 0.96
ZNF563-201ENST00000293725 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.96
ZNF563-201ENST00000293725 FYCO1Q9BQS8 1478 aa21.05■□□□□ 0.96
ZNF563-201ENST00000293725 ZBTB47Q9UFB7 747 aaPredicted RBP21.05■□□□□ 0.96
ZNF563-201ENST00000293725 CFTRP13569 1480 aa21.05■□□□□ 0.96
ZNF563-201ENST00000293725 NAIPQ13075 1403 aa21.04■□□□□ 0.96
ZNF563-201ENST00000293725 C11orf95C9JLR9 678 aaPredicted RBP21.03■□□□□ 0.96
ZNF563-201ENST00000293725 CCDC136Q96JN2 1154 aa21.03■□□□□ 0.96
ZNF563-201ENST00000293725 SALL2Q9Y467 1007 aaPredicted RBP21.02■□□□□ 0.96
ZNF563-201ENST00000293725 AKNAQ7Z591 1439 aa21.02■□□□□ 0.95
ZNF563-201ENST00000293725 CASKIN1Q8WXD9 1431 aa21.02■□□□□ 0.95
ZNF563-201ENST00000293725 FGD5Q6ZNL6 1462 aa21■□□□□ 0.95
ZNF563-201ENST00000293725 CCDC7Q96M83 1385 aa21■□□□□ 0.95
ZNF563-201ENST00000293725 FMN1Q68DA7 1419 aa20.99■□□□□ 0.95
ZNF563-201ENST00000293725 IL27Q8NEV9 243 aa20.98■□□□□ 0.95
ZNF563-201ENST00000293725 MTUS2Q5JR59 1369 aa20.98■□□□□ 0.95
ZNF563-201ENST00000293725 HMGXB3Q12766 1538 aa20.96■□□□□ 0.95
ZNF563-201ENST00000293725 NCOA1Q15788 1441 aa20.95■□□□□ 0.94
ZNF563-201ENST00000293725 RTN4Q9NQC3 1192 aaKnown RBP20.95■□□□□ 0.94
ZNF563-201ENST00000293725 NCAPD3P42695 1498 aa20.95■□□□□ 0.94
ZNF563-201ENST00000293725 RRP7BPQ9NSQ0 103 aa20.94■□□□□ 0.94
ZNF563-201ENST00000293725 SMG6Q86US8 1419 aaKnown RBP20.94■□□□□ 0.94
ZNF563-201ENST00000293725 CNGB1Q14028 1251 aaPredicted RBP20.92■□□□□ 0.94
ZNF563-201ENST00000293725 L3MBTL2Q969R5 705 aa20.91■□□□□ 0.94
ZNF563-201ENST00000293725 NUDCQ9Y266 331 aa20.91■□□□□ 0.94
ZNF563-201ENST00000293725 CHIC2Q9UKJ5 165 aa20.9■□□□□ 0.94
ZNF563-201ENST00000293725 EFCAB5A4FU69 1503 aa20.89■□□□□ 0.94
ZNF563-201ENST00000293725 SENP3-EIF4A1A0A087X0R7 540 aa20.89■□□□□ 0.93
ZNF563-201ENST00000293725 NPM2Q86SE8 214 aaKnown RBP20.89■□□□□ 0.93
ZNF563-201ENST00000293725 MYOM3Q5VTT5 1437 aa20.88■□□□□ 0.93
ZNF563-201ENST00000293725 DENND4BO75064 1496 aaPredicted RBP20.87■□□□□ 0.93
ZNF563-201ENST00000293725 KIF7Q2M1P5 1343 aa20.87■□□□□ 0.93
ZNF563-201ENST00000293725 RNF123Q5XPI4 1314 aa20.86■□□□□ 0.93
ZNF563-201ENST00000293725 FOXD1Q16676 465 aa20.85■□□□□ 0.93
ZNF563-201ENST00000293725 LAS1LQ9Y4W2 734 aaKnown RBP20.84■□□□□ 0.93
ZNF563-201ENST00000293725 SNAPC4Q5SXM2 1469 aa20.83■□□□□ 0.92
ZNF563-201ENST00000293725 NEFMP07197 916 aa20.82■□□□□ 0.92
ZNF563-201ENST00000293725 NBPF8Q3BBV2 869 aa20.82■□□□□ 0.92
ZNF563-201ENST00000293725 MPHOSPH9Q99550 1183 aa20.81■□□□□ 0.92
ZNF563-201ENST00000293725 HECW1Q76N89 1606 aa20.81■□□□□ 0.92
ZNF563-201ENST00000293725 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.79■□□□□ 0.92
ZNF563-201ENST00000293725 PRDM2Q13029 1718 aa20.78■□□□□ 0.92
ZNF563-201ENST00000293725 POLR3GLQ9BT43 218 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms