RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 ADAMTS12P58397 1594 aa21.69■■□□□ 1.06
ABCF3-201ENST00000292808 GRIN2BQ13224 1484 aa21.66■■□□□ 1.06
ABCF3-201ENST00000292808 EIF4G3O43432 1585 aaKnown RBP21.64■■□□□ 1.06
ABCF3-201ENST00000292808 ZEB1P37275 1124 aaPredicted RBP21.64■■□□□ 1.05
ABCF3-201ENST00000292808 FHAD1B1AJZ9 1412 aa21.64■■□□□ 1.05
ABCF3-201ENST00000292808 EFCAB5A4FU69 1503 aa21.63■■□□□ 1.05
ABCF3-201ENST00000292808 APLP2Q06481 763 aa21.59■■□□□ 1.05
ABCF3-201ENST00000292808 SAMD9Q5K651 1589 aa21.57■■□□□ 1.04
ABCF3-201ENST00000292808 FHOD3Q2V2M9 1422 aa21.57■■□□□ 1.04
ABCF3-201ENST00000292808 KANK4Q5T7N3 995 aaPredicted RBP21.55■■□□□ 1.04
ABCF3-201ENST00000292808 PCF11O94913 1555 aaKnown RBP21.55■■□□□ 1.04
ABCF3-201ENST00000292808 SNAPC4Q5SXM2 1469 aa21.53■■□□□ 1.04
ABCF3-201ENST00000292808 P3H3Q8IVL6 736 aa21.53■■□□□ 1.04
ABCF3-201ENST00000292808 TIAM1Q13009 1591 aa21.51■■□□□ 1.03
ABCF3-201ENST00000292808 MAP3K1Q13233 1512 aa21.5■■□□□ 1.03
ABCF3-201ENST00000292808 IQGAP2Q13576 1575 aa21.47■■□□□ 1.03
ABCF3-201ENST00000292808 CFAP43Q8NDM7 1665 aa21.47■■□□□ 1.03
ABCF3-201ENST00000292808 MAGI1Q96QZ7 1491 aaPredicted RBP21.44■■□□□ 1.02
ABCF3-201ENST00000292808 GRIN2AQ12879 1464 aa21.44■■□□□ 1.02
ABCF3-201ENST00000292808 FYCO1Q9BQS8 1478 aa21.44■■□□□ 1.02
ABCF3-201ENST00000292808 CASKIN1Q8WXD9 1431 aa21.43■■□□□ 1.02
ABCF3-201ENST00000292808 FMN1Q68DA7 1419 aa21.4■■□□□ 1.02
ABCF3-201ENST00000292808 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.39■■□□□ 1.01
ABCF3-201ENST00000292808 LRRC9Q6ZRR7 1453 aa21.38■■□□□ 1.01
ABCF3-201ENST00000292808 SYNJ2O15056 1496 aa21.37■■□□□ 1.01
ABCF3-201ENST00000292808 UGGT2Q9NYU1 1516 aa21.37■■□□□ 1.01
ABCF3-201ENST00000292808 LRRIQ1Q96JM4 1722 aa21.37■■□□□ 1.01
ABCF3-201ENST00000292808 KIAA0586Q9BVV6 1533 aa21.36■■□□□ 1.01
ABCF3-201ENST00000292808 RRBP1Q9P2E9 1410 aaKnown RBP21.35■■□□□ 1.01
ABCF3-201ENST00000292808 CEP170Q5SW79 1584 aa21.34■■□□□ 1.01
ABCF3-201ENST00000292808 CCER1Q8TC90 406 aaPredicted RBP21.32■■□□□ 1
ABCF3-201ENST00000292808 HNRNPUL2Q1KMD3 747 aaKnown RBP21.29■■□□□ 1
ABCF3-201ENST00000292808 DISP1Q96F81 1524 aa21.29■■□□□ 1
ABCF3-201ENST00000292808 KIAA0556O60303 1618 aa21.27■■□□□ 1
ABCF3-201ENST00000292808 ATP1B4Q9UN42 357 aaPredicted RBP21.27■■□□□ 1
ABCF3-201ENST00000292808 NUP160Q12769 1436 aa21.27■■□□□ 1
ABCF3-201ENST00000292808 CHMP7Q8WUX9 453 aaPredicted RBP21.26■□□□□ 0.99
ABCF3-201ENST00000292808 PHLDB1Q86UU1 1377 aa21.24■□□□□ 0.99
ABCF3-201ENST00000292808 CCNB3Q8WWL7 1395 aa21.23■□□□□ 0.99
ABCF3-201ENST00000292808 FBLN2P98095 1184 aa21.19■□□□□ 0.98
ABCF3-201ENST00000292808 HECW1Q76N89 1606 aa21.19■□□□□ 0.98
ABCF3-201ENST00000292808 MAGI3Q5TCQ9 1506 aa21.16■□□□□ 0.98
ABCF3-201ENST00000292808 CHD1O14646 1710 aa21.14■□□□□ 0.98
ABCF3-201ENST00000292808 CCDC18Q5T9S5 1454 aa21.14■□□□□ 0.98
ABCF3-201ENST00000292808 EPRSP07814 1512 aaKnown RBP21.13■□□□□ 0.97
ABCF3-201ENST00000292808 EHBP1L1Q8N3D4 1523 aa21.12■□□□□ 0.97
ABCF3-201ENST00000292808 CDK13Q14004 1512 aaKnown RBP21.1■□□□□ 0.97
ABCF3-201ENST00000292808 MTUS2Q5JR59 1369 aa21.1■□□□□ 0.97
ABCF3-201ENST00000292808 RAPGEF6Q8TEU7 1601 aa21.08■□□□□ 0.97
ABCF3-201ENST00000292808 SUPT6HQ7KZ85 1726 aaKnown RBP21.08■□□□□ 0.96
ABCF3-201ENST00000292808 NCOA2Q15596 1464 aa21.07■□□□□ 0.96
ABCF3-201ENST00000292808 ARHGEF11O15085 1522 aa21.07■□□□□ 0.96
ABCF3-201ENST00000292808 NUP153P49790 1475 aaKnown RBP21.07■□□□□ 0.96
ABCF3-201ENST00000292808 JPH4Q96JJ6 628 aa21.06■□□□□ 0.96
ABCF3-201ENST00000292808 FGD6Q6ZV73 1430 aa21.03■□□□□ 0.96
ABCF3-201ENST00000292808 CARMIL2Q6F5E8 1435 aa21.02■□□□□ 0.96
ABCF3-201ENST00000292808 PLB1Q6P1J6 1458 aa21■□□□□ 0.95
ABCF3-201ENST00000292808 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21■□□□□ 0.95
ABCF3-201ENST00000292808 ITGAEP38570 1179 aa21■□□□□ 0.95
ABCF3-201ENST00000292808 MYOM3Q5VTT5 1437 aa20.99■□□□□ 0.95
ABCF3-201ENST00000292808 ARID3CA6NKF2 412 aa20.98■□□□□ 0.95
ABCF3-201ENST00000292808 FAM50AQ14320 339 aaKnown RBP20.98■□□□□ 0.95
ABCF3-201ENST00000292808 SHROOM2Q13796 1616 aa20.97■□□□□ 0.95
ABCF3-201ENST00000292808 ABCA8O94911 1581 aa20.95■□□□□ 0.94
ABCF3-201ENST00000292808 DHX57Q6P158 1386 aaKnown RBP20.95■□□□□ 0.94
ABCF3-201ENST00000292808 PRG4Q92954 1404 aaPredicted RBP20.94■□□□□ 0.94
ABCF3-201ENST00000292808 PTPN23Q9H3S7 1636 aa20.91■□□□□ 0.94
ABCF3-201ENST00000292808 RAB3GAP2Q9H2M9 1393 aa20.89■□□□□ 0.94
ABCF3-201ENST00000292808 PTPRKQ15262 1439 aa20.88■□□□□ 0.93
ABCF3-201ENST00000292808 CLASP1Q7Z460 1538 aa20.88■□□□□ 0.93
ABCF3-201ENST00000292808 TCOF1Q13428 1488 aaKnown RBP20.88■□□□□ 0.93
ABCF3-201ENST00000292808 SETD5Q9C0A6 1442 aa20.87■□□□□ 0.93
ABCF3-201ENST00000292808 ERCC6L2Q5T890 1561 aa20.86■□□□□ 0.93
ABCF3-201ENST00000292808 TROQ12816 1431 aaPredicted RBP20.83■□□□□ 0.92
ABCF3-201ENST00000292808 ADCY10Q96PN6 1610 aa20.83■□□□□ 0.92
ABCF3-201ENST00000292808 PTPRGP23470 1445 aa20.82■□□□□ 0.92
ABCF3-201ENST00000292808 MIA2Q96PC5 1412 aa20.82■□□□□ 0.92
ABCF3-201ENST00000292808 KIF14Q15058 1648 aa20.81■□□□□ 0.92
ABCF3-201ENST00000292808 ATP10BO94823 1461 aa20.8■□□□□ 0.92
ABCF3-201ENST00000292808 CLSPNQ9HAW4 1339 aa20.8■□□□□ 0.92
ABCF3-201ENST00000292808 CDK11AQ9UQ88 783 aaPredicted RBP20.78■□□□□ 0.92
ABCF3-201ENST00000292808 MAPKBP1O60336 1514 aa20.76■□□□□ 0.91
ABCF3-201ENST00000292808 HFM1A2PYH4 1435 aa20.75■□□□□ 0.91
ABCF3-201ENST00000292808 NAIPQ13075 1403 aa20.71■□□□□ 0.91
ABCF3-201ENST00000292808 UACAQ9BZF9 1416 aa20.71■□□□□ 0.91
ABCF3-201ENST00000292808 ITSN2Q9NZM3 1697 aa20.71■□□□□ 0.91
ABCF3-201ENST00000292808 GPATCH8Q9UKJ3 1502 aaKnown RBP20.7■□□□□ 0.9
ABCF3-201ENST00000292808 ABCC10Q5T3U5 1492 aa20.69■□□□□ 0.9
ABCF3-201ENST00000292808 GCC2Q8IWJ2 1684 aa20.68■□□□□ 0.9
ABCF3-201ENST00000292808 DNMT1P26358 1616 aaKnown RBP20.68■□□□□ 0.9
ABCF3-201ENST00000292808 ABCC2Q92887 1545 aa20.67■□□□□ 0.9
ABCF3-201ENST00000292808 CDC42BPAQ5VT25 1732 aa20.67■□□□□ 0.9
ABCF3-201ENST00000292808 ZNF644Q9H582 1327 aaPredicted RBP20.67■□□□□ 0.9
ABCF3-201ENST00000292808 AKNAQ7Z591 1439 aa20.65■□□□□ 0.9
ABCF3-201ENST00000292808 DAPK1P53355 1430 aa20.64■□□□□ 0.9
ABCF3-201ENST00000292808 PLEKHD1A6NEE1 506 aa20.64■□□□□ 0.9
ABCF3-201ENST00000292808 CAMSAP2Q08AD1 1489 aa20.64■□□□□ 0.89
ABCF3-201ENST00000292808 ABCC5O15440 1437 aa20.64■□□□□ 0.89
ABCF3-201ENST00000292808 KDM6BO15054 1643 aa20.62■□□□□ 0.89
ABCF3-201ENST00000292808 DIEXFQ68CQ4 756 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms