RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 SYNJ2O15056 1496 aa17.05■□□□□ 0.32
CCDC58-201ENST00000291458 ADAMTS12P58397 1594 aa17.04■□□□□ 0.32
CCDC58-201ENST00000291458 CLASP1Q7Z460 1538 aa17.01■□□□□ 0.31
CCDC58-201ENST00000291458 GRIN2AQ12879 1464 aa16.95■□□□□ 0.3
CCDC58-201ENST00000291458 NPM3O75607 178 aaKnown RBP16.95■□□□□ 0.3
CCDC58-201ENST00000291458 ARAP1Q96P48 1450 aa16.94■□□□□ 0.3
CCDC58-201ENST00000291458 ERICH3Q5RHP9 1530 aa16.94■□□□□ 0.3
CCDC58-201ENST00000291458 CEP170Q5SW79 1584 aa16.92■□□□□ 0.3
CCDC58-201ENST00000291458 FHAD1B1AJZ9 1412 aa16.91■□□□□ 0.3
CCDC58-201ENST00000291458 CYB5RLQ6IPT4 315 aa16.91■□□□□ 0.3
CCDC58-201ENST00000291458 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
CCDC58-201ENST00000291458 HOXD11P31277 338 aaPredicted RBP16.84■□□□□ 0.29
CCDC58-201ENST00000291458 NUP160Q12769 1436 aa16.84■□□□□ 0.29
CCDC58-201ENST00000291458 KIF27Q86VH2 1401 aa16.84■□□□□ 0.29
CCDC58-201ENST00000291458 ERCC6L2Q5T890 1561 aa16.84■□□□□ 0.29
CCDC58-201ENST00000291458 POTEDQ86YR6 584 aa16.82■□□□□ 0.28
CCDC58-201ENST00000291458 CUL7Q14999 1698 aa16.81■□□□□ 0.28
CCDC58-201ENST00000291458 RUSC2Q8N2Y8 1516 aa16.79■□□□□ 0.28
CCDC58-201ENST00000291458 SHROOM2Q13796 1616 aa16.77■□□□□ 0.27
CCDC58-201ENST00000291458 IGF1RP08069 1367 aa16.74■□□□□ 0.27
CCDC58-201ENST00000291458 PRG4Q92954 1404 aaPredicted RBP16.7■□□□□ 0.26
CCDC58-201ENST00000291458 CARMIL1Q5VZK9 1371 aa16.69■□□□□ 0.26
CCDC58-201ENST00000291458 TRHP20396 242 aaPredicted RBP16.69■□□□□ 0.26
CCDC58-201ENST00000291458 JPH4Q96JJ6 628 aa16.63■□□□□ 0.25
CCDC58-201ENST00000291458 KIAA0586Q9BVV6 1533 aa16.63■□□□□ 0.25
CCDC58-201ENST00000291458 IQGAP2Q13576 1575 aa16.6■□□□□ 0.25
CCDC58-201ENST00000291458 TTBK1Q5TCY1 1321 aaPredicted RBP16.59■□□□□ 0.25
CCDC58-201ENST00000291458 RAPGEF2Q9Y4G8 1499 aa16.58■□□□□ 0.24
CCDC58-201ENST00000291458 CTTNBP2Q8WZ74 1663 aa16.55■□□□□ 0.24
CCDC58-201ENST00000291458 ADCY10Q96PN6 1610 aa16.52■□□□□ 0.23
CCDC58-201ENST00000291458 CARMIL2Q6F5E8 1435 aa16.47■□□□□ 0.23
CCDC58-201ENST00000291458 FAM9AQ8IZU1 332 aaPredicted RBP16.46■□□□□ 0.23
CCDC58-201ENST00000291458 KIAA0556O60303 1618 aa16.45■□□□□ 0.22
CCDC58-201ENST00000291458 KIF13AQ9H1H9 1805 aa16.45■□□□□ 0.22
CCDC58-201ENST00000291458 DISP1Q96F81 1524 aa16.45■□□□□ 0.22
CCDC58-201ENST00000291458 PRXQ9BXM0 1461 aa16.44■□□□□ 0.22
CCDC58-201ENST00000291458 PTPRGP23470 1445 aa16.44■□□□□ 0.22
CCDC58-201ENST00000291458 UGGT2Q9NYU1 1516 aa16.43■□□□□ 0.22
CCDC58-201ENST00000291458 TNIKQ9UKE5 1360 aa16.42■□□□□ 0.22
CCDC58-201ENST00000291458 SLC4A1APQ9BWU0 796 aaKnown RBP16.42■□□□□ 0.22
CCDC58-201ENST00000291458 DCAF8L1A6NGE4 600 aa16.4■□□□□ 0.22
CCDC58-201ENST00000291458 NPM1P06748 294 aaKnown RBP eCLIP16.4■□□□□ 0.22
CCDC58-201ENST00000291458 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
CCDC58-201ENST00000291458 EHMT2Q96KQ7 1210 aa16.37■□□□□ 0.21
CCDC58-201ENST00000291458 MAPKBP1O60336 1514 aa16.36■□□□□ 0.21
CCDC58-201ENST00000291458 DIP2BQ9P265 1576 aa16.35■□□□□ 0.21
CCDC58-201ENST00000291458 EEA1Q15075 1411 aa16.35■□□□□ 0.21
CCDC58-201ENST00000291458 TSPOAP1O95153 1857 aa16.34■□□□□ 0.21
CCDC58-201ENST00000291458 RANGAP1P46060 587 aaPredicted RBP16.34■□□□□ 0.21
CCDC58-201ENST00000291458 ABCC2Q92887 1545 aa16.34■□□□□ 0.21
CCDC58-201ENST00000291458 GOLGA3Q08378 1498 aa16.32■□□□□ 0.2
CCDC58-201ENST00000291458 UACAQ9BZF9 1416 aa16.32■□□□□ 0.2
CCDC58-201ENST00000291458 ABCC10Q5T3U5 1492 aa16.31■□□□□ 0.2
CCDC58-201ENST00000291458 FAM69CQ0P6D2 419 aa16.31■□□□□ 0.2
CCDC58-201ENST00000291458 ZCCHC11Q5TAX3 1644 aaKnown RBP16.3■□□□□ 0.2
CCDC58-201ENST00000291458 P3H3Q8IVL6 736 aa16.3■□□□□ 0.2
CCDC58-201ENST00000291458 PLB1Q6P1J6 1458 aa16.29■□□□□ 0.2
CCDC58-201ENST00000291458 KIF21BO75037 1637 aa16.29■□□□□ 0.2
CCDC58-201ENST00000291458 UHRF1BP1LA0JNW5 1464 aa16.29■□□□□ 0.2
CCDC58-201ENST00000291458 ASXL2Q76L83 1435 aa16.28■□□□□ 0.2
CCDC58-201ENST00000291458 SAMD9Q5K651 1589 aa16.25■□□□□ 0.19
CCDC58-201ENST00000291458 ARID3CA6NKF2 412 aa16.24■□□□□ 0.19
CCDC58-201ENST00000291458 ABCA8O94911 1581 aa16.24■□□□□ 0.19
CCDC58-201ENST00000291458 KDM5BQ9UGL1 1544 aa16.23■□□□□ 0.19
CCDC58-201ENST00000291458 FHOD3Q2V2M9 1422 aa16.2■□□□□ 0.18
CCDC58-201ENST00000291458 KDM6BO15054 1643 aa16.17■□□□□ 0.18
CCDC58-201ENST00000291458 RAPGEF6Q8TEU7 1601 aa16.17■□□□□ 0.18
CCDC58-201ENST00000291458 PPRC1Q5VV67 1664 aaKnown RBP16.17■□□□□ 0.18
CCDC58-201ENST00000291458 EPRSP07814 1512 aaKnown RBP16.16■□□□□ 0.18
CCDC58-201ENST00000291458 UBTFP17480 764 aaKnown RBP16.16■□□□□ 0.18
CCDC58-201ENST00000291458 WDR7Q9Y4E6 1490 aa16.16■□□□□ 0.18
CCDC58-201ENST00000291458 GLI2P10070 1586 aa16.14■□□□□ 0.17
CCDC58-201ENST00000291458 MAP3K4Q9Y6R4 1608 aa16.13■□□□□ 0.17
CCDC58-201ENST00000291458 EFCAB5A4FU69 1503 aa16.12■□□□□ 0.17
CCDC58-201ENST00000291458 KCNH8Q96L42 1107 aa16.1■□□□□ 0.17
CCDC58-201ENST00000291458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.09■□□□□ 0.17
CCDC58-201ENST00000291458 HNRNPUL2Q1KMD3 747 aaKnown RBP16.09■□□□□ 0.17
CCDC58-201ENST00000291458 ATP10BO94823 1461 aa16.07■□□□□ 0.16
CCDC58-201ENST00000291458 CFAP43Q8NDM7 1665 aa16.06■□□□□ 0.16
CCDC58-201ENST00000291458 NUP153P49790 1475 aaKnown RBP16.06■□□□□ 0.16
CCDC58-201ENST00000291458 TEX14Q8IWB6 1497 aa16.03■□□□□ 0.16
CCDC58-201ENST00000291458 ARHGAP35Q9NRY4 1499 aa16.03■□□□□ 0.16
CCDC58-201ENST00000291458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.16
CCDC58-201ENST00000291458 CDK13Q14004 1512 aaKnown RBP16.02■□□□□ 0.15
CCDC58-201ENST00000291458 SLC4A2P04920 1241 aa16■□□□□ 0.15
CCDC58-201ENST00000291458 ATP1B4Q9UN42 357 aaPredicted RBP16■□□□□ 0.15
CCDC58-201ENST00000291458 CD109Q6YHK3 1445 aa16■□□□□ 0.15
CCDC58-201ENST00000291458 HECW1Q76N89 1606 aa15.99■□□□□ 0.15
CCDC58-201ENST00000291458 ABCA9Q8IUA7 1624 aa15.97■□□□□ 0.15
CCDC58-201ENST00000291458 COL17A1Q9UMD9 1497 aaPredicted RBP15.97■□□□□ 0.15
CCDC58-201ENST00000291458 FMN1Q68DA7 1419 aa15.94■□□□□ 0.14
CCDC58-201ENST00000291458 MAGI3Q5TCQ9 1506 aa15.94■□□□□ 0.14
CCDC58-201ENST00000291458 PCF11O94913 1555 aaKnown RBP15.94■□□□□ 0.14
CCDC58-201ENST00000291458 LRRIQ1Q96JM4 1722 aa15.94■□□□□ 0.14
CCDC58-201ENST00000291458 TTC37Q6PGP7 1564 aa15.92■□□□□ 0.14
CCDC58-201ENST00000291458 FOXD4L1Q9NU39 408 aa15.9■□□□□ 0.14
CCDC58-201ENST00000291458 CLIP1P30622 1438 aa15.89■□□□□ 0.13
CCDC58-201ENST00000291458 PLEKHD1A6NEE1 506 aa15.89■□□□□ 0.13
CCDC58-201ENST00000291458 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.88■□□□□ 0.13
CCDC58-201ENST00000291458 KIF14Q15058 1648 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms