RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 CEP162Q5TB80 1403 aa18.33■□□□□ 0.53
CHRNB3-201ENST00000289957 CEP170Q5SW79 1584 aa18.31■□□□□ 0.52
CHRNB3-201ENST00000289957 CTTNBP2Q8WZ74 1663 aa18.27■□□□□ 0.52
CHRNB3-201ENST00000289957 HRCP23327 699 aa18.27■□□□□ 0.52
CHRNB3-201ENST00000289957 P3H3Q8IVL6 736 aa18.25■□□□□ 0.51
CHRNB3-201ENST00000289957 CLIP1P30622 1438 aa18.24■□□□□ 0.51
CHRNB3-201ENST00000289957 NUP160Q12769 1436 aa18.22■□□□□ 0.51
CHRNB3-201ENST00000289957 ARHGAP35Q9NRY4 1499 aa18.2■□□□□ 0.5
CHRNB3-201ENST00000289957 IQGAP2Q13576 1575 aa18.19■□□□□ 0.5
CHRNB3-201ENST00000289957 ARAP1Q96P48 1450 aa18.17■□□□□ 0.5
CHRNB3-201ENST00000289957 KIAA0586Q9BVV6 1533 aa18.17■□□□□ 0.5
CHRNB3-201ENST00000289957 FHOD3Q2V2M9 1422 aa18.14■□□□□ 0.49
CHRNB3-201ENST00000289957 TTBK1Q5TCY1 1321 aaPredicted RBP18.14■□□□□ 0.49
CHRNB3-201ENST00000289957 JPH4Q96JJ6 628 aa18.11■□□□□ 0.49
CHRNB3-201ENST00000289957 DISP1Q96F81 1524 aa18.09■□□□□ 0.49
CHRNB3-201ENST00000289957 ERCC6L2Q5T890 1561 aa18.08■□□□□ 0.49
CHRNB3-201ENST00000289957 CLASP1Q7Z460 1538 aa18.08■□□□□ 0.48
CHRNB3-201ENST00000289957 SAMD9Q5K651 1589 aa18.08■□□□□ 0.48
CHRNB3-201ENST00000289957 PPARGC1BQ86YN6 1023 aaKnown RBP18.07■□□□□ 0.48
CHRNB3-201ENST00000289957 UGGT2Q9NYU1 1516 aa18.07■□□□□ 0.48
CHRNB3-201ENST00000289957 OSCARQ8IYS5 282 aa18.05■□□□□ 0.48
CHRNB3-201ENST00000289957 PRG4Q92954 1404 aaPredicted RBP18.03■□□□□ 0.48
CHRNB3-201ENST00000289957 KIAA0556O60303 1618 aa18.02■□□□□ 0.48
CHRNB3-201ENST00000289957 EFCAB5A4FU69 1503 aa18.01■□□□□ 0.47
CHRNB3-201ENST00000289957 VPS8Q8N3P4 1428 aa18.01■□□□□ 0.47
CHRNB3-201ENST00000289957 SHROOM2Q13796 1616 aa18■□□□□ 0.47
CHRNB3-201ENST00000289957 PCGF6Q9BYE7 350 aa17.98■□□□□ 0.47
CHRNB3-201ENST00000289957 ARID3CA6NKF2 412 aa17.97■□□□□ 0.47
CHRNB3-201ENST00000289957 ATP1B4Q9UN42 357 aaPredicted RBP17.96■□□□□ 0.47
CHRNB3-201ENST00000289957 PCF11O94913 1555 aaKnown RBP17.95■□□□□ 0.46
CHRNB3-201ENST00000289957 CARMIL2Q6F5E8 1435 aa17.91■□□□□ 0.46
CHRNB3-201ENST00000289957 PLB1Q6P1J6 1458 aa17.91■□□□□ 0.46
CHRNB3-201ENST00000289957 LRRIQ1Q96JM4 1722 aa17.88■□□□□ 0.45
CHRNB3-201ENST00000289957 FMN1Q68DA7 1419 aa17.87■□□□□ 0.45
CHRNB3-201ENST00000289957 TRIM26Q12899 539 aaPredicted RBP17.86■□□□□ 0.45
CHRNB3-201ENST00000289957 KANK4Q5T7N3 995 aaPredicted RBP17.86■□□□□ 0.45
CHRNB3-201ENST00000289957 PTPRGP23470 1445 aa17.85■□□□□ 0.45
CHRNB3-201ENST00000289957 CASKIN1Q8WXD9 1431 aa17.84■□□□□ 0.45
CHRNB3-201ENST00000289957 CDK13Q14004 1512 aaKnown RBP17.81■□□□□ 0.44
CHRNB3-201ENST00000289957 FYCO1Q9BQS8 1478 aa17.81■□□□□ 0.44
CHRNB3-201ENST00000289957 ARHGEF11O15085 1522 aa17.81■□□□□ 0.44
CHRNB3-201ENST00000289957 NUP153P49790 1475 aaKnown RBP17.8■□□□□ 0.44
CHRNB3-201ENST00000289957 RAPGEF6Q8TEU7 1601 aa17.8■□□□□ 0.44
CHRNB3-201ENST00000289957 ABCA8O94911 1581 aa17.78■□□□□ 0.44
CHRNB3-201ENST00000289957 TIAM1Q13009 1591 aa17.76■□□□□ 0.43
CHRNB3-201ENST00000289957 EPRSP07814 1512 aaKnown RBP17.75■□□□□ 0.43
CHRNB3-201ENST00000289957 APLP2Q06481 763 aa17.75■□□□□ 0.43
CHRNB3-201ENST00000289957 RIMBP3CA6NJZ7 1639 aa17.75■□□□□ 0.43
CHRNB3-201ENST00000289957 RIMBP3BA6NNM3 1639 aa17.75■□□□□ 0.43
CHRNB3-201ENST00000289957 RIMBP3Q9UFD9 1639 aa17.75■□□□□ 0.43
CHRNB3-201ENST00000289957 MAGI3Q5TCQ9 1506 aa17.74■□□□□ 0.43
CHRNB3-201ENST00000289957 HECW1Q76N89 1606 aa17.74■□□□□ 0.43
CHRNB3-201ENST00000289957 UACAQ9BZF9 1416 aa17.73■□□□□ 0.43
CHRNB3-201ENST00000289957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
CHRNB3-201ENST00000289957 HNRNPUL2Q1KMD3 747 aaKnown RBP17.72■□□□□ 0.43
CHRNB3-201ENST00000289957 CFAP43Q8NDM7 1665 aa17.72■□□□□ 0.43
CHRNB3-201ENST00000289957 CYB5RLQ6IPT4 315 aa17.71■□□□□ 0.43
CHRNB3-201ENST00000289957 ADCY10Q96PN6 1610 aa17.7■□□□□ 0.42
CHRNB3-201ENST00000289957 ATP10BO94823 1461 aa17.69■□□□□ 0.42
CHRNB3-201ENST00000289957 LRRC9Q6ZRR7 1453 aa17.69■□□□□ 0.42
CHRNB3-201ENST00000289957 ABCC2Q92887 1545 aa17.67■□□□□ 0.42
CHRNB3-201ENST00000289957 CCDC18Q5T9S5 1454 aa17.63■□□□□ 0.41
CHRNB3-201ENST00000289957 MAP3K1Q13233 1512 aa17.63■□□□□ 0.41
CHRNB3-201ENST00000289957 MTUS2Q5JR59 1369 aa17.63■□□□□ 0.41
CHRNB3-201ENST00000289957 ZEB1P37275 1124 aaPredicted RBP17.63■□□□□ 0.41
CHRNB3-201ENST00000289957 ZCCHC11Q5TAX3 1644 aaKnown RBP17.61■□□□□ 0.41
CHRNB3-201ENST00000289957 PHLDB1Q86UU1 1377 aa17.59■□□□□ 0.41
CHRNB3-201ENST00000289957 UHRF1BP1LA0JNW5 1464 aa17.59■□□□□ 0.41
CHRNB3-201ENST00000289957 KDM5BQ9UGL1 1544 aa17.58■□□□□ 0.4
CHRNB3-201ENST00000289957 KIF14Q15058 1648 aa17.57■□□□□ 0.4
CHRNB3-201ENST00000289957 KCNH8Q96L42 1107 aa17.55■□□□□ 0.4
CHRNB3-201ENST00000289957 EHBP1L1Q8N3D4 1523 aa17.54■□□□□ 0.4
CHRNB3-201ENST00000289957 NCOA2Q15596 1464 aa17.54■□□□□ 0.4
CHRNB3-201ENST00000289957 TROQ12816 1431 aaPredicted RBP17.53■□□□□ 0.4
CHRNB3-201ENST00000289957 PLEKHD1A6NEE1 506 aa17.52■□□□□ 0.4
CHRNB3-201ENST00000289957 SUPT6HQ7KZ85 1726 aaKnown RBP17.49■□□□□ 0.39
CHRNB3-201ENST00000289957 CDK11AQ9UQ88 783 aaPredicted RBP17.49■□□□□ 0.39
CHRNB3-201ENST00000289957 DNAJC5Q9H3Z4 198 aa17.49■□□□□ 0.39
CHRNB3-201ENST00000289957 ASXL2Q76L83 1435 aa17.48■□□□□ 0.39
CHRNB3-201ENST00000289957 TTC37Q6PGP7 1564 aa17.45■□□□□ 0.38
CHRNB3-201ENST00000289957 NPM1P06748 294 aaKnown RBP eCLIP17.44■□□□□ 0.38
CHRNB3-201ENST00000289957 ZNF644Q9H582 1327 aaPredicted RBP17.44■□□□□ 0.38
CHRNB3-201ENST00000289957 WDR7Q9Y4E6 1490 aa17.44■□□□□ 0.38
CHRNB3-201ENST00000289957 ABCC10Q5T3U5 1492 aa17.43■□□□□ 0.38
CHRNB3-201ENST00000289957 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.43■□□□□ 0.38
CHRNB3-201ENST00000289957 ITGAEP38570 1179 aa17.42■□□□□ 0.38
CHRNB3-201ENST00000289957 MYOM3Q5VTT5 1437 aa17.42■□□□□ 0.38
CHRNB3-201ENST00000289957 FAM50AQ14320 339 aaKnown RBP17.41■□□□□ 0.38
CHRNB3-201ENST00000289957 FGD6Q6ZV73 1430 aa17.41■□□□□ 0.38
CHRNB3-201ENST00000289957 RRBP1Q9P2E9 1410 aaKnown RBP17.4■□□□□ 0.38
CHRNB3-201ENST00000289957 CCNB3Q8WWL7 1395 aa17.4■□□□□ 0.38
CHRNB3-201ENST00000289957 GPATCH8Q9UKJ3 1502 aaKnown RBP17.4■□□□□ 0.38
CHRNB3-201ENST00000289957 CDC42BPAQ5VT25 1732 aa17.39■□□□□ 0.37
CHRNB3-201ENST00000289957 ZNF777Q9ULD5 760 aaPredicted RBP17.37■□□□□ 0.37
CHRNB3-201ENST00000289957 CFDP1Q9UEE9 299 aaPredicted RBP17.34■□□□□ 0.37
CHRNB3-201ENST00000289957 CDC42BPBQ9Y5S2 1711 aa17.34■□□□□ 0.37
CHRNB3-201ENST00000289957 PTPN23Q9H3S7 1636 aa17.34■□□□□ 0.37
CHRNB3-201ENST00000289957 MAPKBP1O60336 1514 aa17.33■□□□□ 0.37
CHRNB3-201ENST00000289957 PTPRKQ15262 1439 aa17.3■□□□□ 0.36
CHRNB3-201ENST00000289957 PREX2Q70Z35 1606 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms