RNA–Protein interactions for RNA: ENST00000289893.8

MACF1-201, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5 BASIC

Gene MACF1, Length 19,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-201ENST00000289893 DDX10Q13206 875 aaKnown RBP4.69□□□□□ -1.66
MACF1-201ENST00000289893 CHGAP10645 457 aaKnown RBP4.69□□□□□ -1.66
MACF1-201ENST00000289893 MYH16Q9H6N6 1097 aa4.69□□□□□ -1.66
MACF1-201ENST00000289893 NAP1L5Q96NT1 182 aaPredicted RBP4.69□□□□□ -1.66
MACF1-201ENST00000289893 PTMAP06454 111 aaKnown RBP4.68□□□□□ -1.66
MACF1-201ENST00000289893 ESF1Q9H501 851 aaKnown RBP4.68□□□□□ -1.66
MACF1-201ENST00000289893 TNIKQ9UKE5 1360 aa4.68□□□□□ -1.66
MACF1-201ENST00000289893 TULP1O00294 542 aaPredicted RBP4.67□□□□□ -1.66
MACF1-201ENST00000289893 BECN1Q14457 450 aa4.67□□□□□ -1.66
MACF1-201ENST00000289893 WDR43Q15061 677 aaKnown RBP eCLIP4.67□□□□□ -1.663e-6■■□□□ 14.2
MACF1-201ENST00000289893 ZRSR1Q15695 479 aaKnown RBP4.67□□□□□ -1.66
MACF1-201ENST00000289893 STAG3Q9UJ98 1225 aa4.67□□□□□ -1.66
MACF1-201ENST00000289893 PODXL2Q9NZ53 605 aa4.66□□□□□ -1.66
MACF1-201ENST00000289893 TMC1Q8TDI8 760 aa4.66□□□□□ -1.66
MACF1-201ENST00000289893 PRKCSHP14314 528 aaPredicted RBP4.66□□□□□ -1.66
MACF1-201ENST00000289893 MRS2Q9HD23 443 aa4.66□□□□□ -1.66
MACF1-201ENST00000289893 ZBTB7CA1YPR0 619 aa4.66□□□□□ -1.66
MACF1-201ENST00000289893 PLEKHG5O94827 1062 aa4.66□□□□□ -1.66
MACF1-201ENST00000289893 DDRGK1Q96HY6 314 aa4.66□□□□□ -1.66
MACF1-201ENST00000289893 TAOK2Q9UL54 1235 aa4.65□□□□□ -1.67
MACF1-201ENST00000289893 SENP3-EIF4A1A0A087X0R7 540 aa4.65□□□□□ -1.67
MACF1-201ENST00000289893 SENP3Q9H4L4 574 aaPredicted RBP4.65□□□□□ -1.67
MACF1-201ENST00000289893 RB1CC1Q8TDY2 1594 aa4.65□□□□□ -1.67
MACF1-201ENST00000289893 GOLGA6L22H0YM25 854 aa4.64□□□□□ -1.67
MACF1-201ENST00000289893 ARID4BQ4LE39 1312 aaPredicted RBP4.64□□□□□ -1.67
MACF1-201ENST00000289893 LAS1LQ9Y4W2 734 aaKnown RBP4.64□□□□□ -1.67
MACF1-201ENST00000289893 PRDM2Q13029 1718 aa4.64□□□□□ -1.67
MACF1-201ENST00000289893 DEKP35659 375 aaKnown RBP4.63□□□□□ -1.67
MACF1-201ENST00000289893 RSPH6AQ9H0K4 717 aa4.63□□□□□ -1.67
MACF1-201ENST00000289893 NCBP3Q53F19 620 aaKnown RBP4.63□□□□□ -1.67
MACF1-201ENST00000289893 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.62□□□□□ -1.679e-8■■□□□ 12.7
MACF1-201ENST00000289893 TNNT3P45378 269 aaPredicted RBP4.62□□□□□ -1.67
MACF1-201ENST00000289893 C14orf37Q86TY3 774 aa4.62□□□□□ -1.67
MACF1-201ENST00000289893 PPM1GO15355 546 aaPredicted RBP4.61□□□□□ -1.67
MACF1-201ENST00000289893 HIRIP3Q9BW71 556 aaPredicted RBP4.61□□□□□ -1.67
MACF1-201ENST00000289893 PKNOX2Q96KN3 472 aa4.61□□□□□ -1.67
MACF1-201ENST00000289893 ARID3AQ99856 593 aa4.61□□□□□ -1.67
MACF1-201ENST00000289893 PLCB2Q00722 1185 aa4.61□□□□□ -1.67
MACF1-201ENST00000289893 KDM2AQ9Y2K7 1162 aa4.61□□□□□ -1.67
MACF1-201ENST00000289893 CALRP27797 417 aaKnown RBP4.6□□□□□ -1.67
MACF1-201ENST00000289893 CADPSQ9ULU8 1353 aa4.6□□□□□ -1.67
MACF1-201ENST00000289893 RGS3P49796 1198 aa4.6□□□□□ -1.67
MACF1-201ENST00000289893 HSP90AA2PQ14568 343 aaPredicted RBP4.6□□□□□ -1.67
MACF1-201ENST00000289893 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.6□□□□□ -1.67
MACF1-201ENST00000289893 CHIC2Q9UKJ5 165 aa4.6□□□□□ -1.67
MACF1-201ENST00000289893 GOLGA6L6A8MZA4 724 aa4.6□□□□□ -1.67
MACF1-201ENST00000289893 CLSTN1O94985 981 aa4.6□□□□□ -1.67
MACF1-201ENST00000289893 VSIG10Q8N0Z9 540 aa4.6□□□□□ -1.67
MACF1-201ENST00000289893 KIF27Q86VH2 1401 aa4.59□□□□□ -1.67
MACF1-201ENST00000289893 MTUS2Q5JR59 1369 aa4.59□□□□□ -1.67
MACF1-201ENST00000289893 BAZ1AQ9NRL2 1556 aaPredicted RBP4.59□□□□□ -1.67
MACF1-201ENST00000289893 MIER1Q8N108 512 aa4.59□□□□□ -1.67
MACF1-201ENST00000289893 HSP90AB1P08238 724 aaKnown RBP4.59□□□□□ -1.67
MACF1-201ENST00000289893 NCAPD3P42695 1498 aa4.59□□□□□ -1.67
MACF1-201ENST00000289893 CASC1Q6TDU7 716 aa4.59□□□□□ -1.67
MACF1-201ENST00000289893 NAP1L2Q9ULW6 460 aaPredicted RBP4.59□□□□□ -1.67
MACF1-201ENST00000289893 FTSJ3Q8IY81 847 aaKnown RBP4.59□□□□□ -1.67
MACF1-201ENST00000289893 NOP58Q9Y2X3 529 aaKnown RBP4.58□□□□□ -1.68
MACF1-201ENST00000289893 APPP05067 770 aa4.58□□□□□ -1.68
MACF1-201ENST00000289893 WRNQ14191 1432 aaPredicted RBP eCLIP4.58□□□□□ -1.68
MACF1-201ENST00000289893 CLIP1P30622 1438 aa4.58□□□□□ -1.68
MACF1-201ENST00000289893 KCNJ4P48050 445 aa4.58□□□□□ -1.68
MACF1-201ENST00000289893 CHAF1AQ13111 956 aaPredicted RBP4.57□□□□□ -1.68
MACF1-201ENST00000289893 DRC7Q8IY82 874 aa4.57□□□□□ -1.68
MACF1-201ENST00000289893 FGD1P98174 961 aa4.57□□□□□ -1.68
MACF1-201ENST00000289893 PNNQ9H307 717 aaKnown RBP4.57□□□□□ -1.68
MACF1-201ENST00000289893 PPP1R15AO75807 674 aaPredicted RBP4.57□□□□□ -1.68
MACF1-201ENST00000289893 MSNP26038 577 aaKnown RBP4.57□□□□□ -1.68
MACF1-201ENST00000289893 L1TD1Q5T7N2 865 aaKnown RBP4.57□□□□□ -1.68
MACF1-201ENST00000289893 RSPH4AQ5TD94 716 aa4.56□□□□□ -1.68
MACF1-201ENST00000289893 A0A0U1RQG5 324 aaPredicted RBP4.56□□□□□ -1.68
MACF1-201ENST00000289893 EIF4G1Q04637 1599 aaKnown RBP4.56□□□□□ -1.68
MACF1-201ENST00000289893 GOLGA3Q08378 1498 aa4.55□□□□□ -1.68
MACF1-201ENST00000289893 NRDCO43847 1150 aa4.55□□□□□ -1.68
MACF1-201ENST00000289893 STAC3Q96MF2 364 aa4.55□□□□□ -1.68
MACF1-201ENST00000289893 SUPT16HQ9Y5B9 1047 aaKnown RBP4.55□□□□□ -1.68
MACF1-201ENST00000289893 OS9Q13438 667 aaPredicted RBP4.55□□□□□ -1.68
MACF1-201ENST00000289893 NEUROD2Q15784 382 aa4.55□□□□□ -1.68
MACF1-201ENST00000289893 GOLGA6L4A6NEF3 574 aa4.55□□□□□ -1.68
MACF1-201ENST00000289893 EIF4G2P78344 907 aaKnown RBP eCLIP4.55□□□□□ -1.682e-8■■■■□ 19.7
MACF1-201ENST00000289893 HAP1P54257 671 aaPredicted RBP4.55□□□□□ -1.68
MACF1-201ENST00000289893 MAPK8IP3Q9UPT6 1336 aa4.54□□□□□ -1.68
MACF1-201ENST00000289893 SPRYD3Q8NCJ5 442 aa4.54□□□□□ -1.68
MACF1-201ENST00000289893 CFAP53Q96M91 514 aa4.54□□□□□ -1.68
MACF1-201ENST00000289893 CARMIL1Q5VZK9 1371 aa4.54□□□□□ -1.68
MACF1-201ENST00000289893 FRAT1Q92837 279 aaPredicted RBP4.54□□□□□ -1.68
MACF1-201ENST00000289893 CFAP65Q6ZU64 1925 aaKnown RBP4.54□□□□□ -1.68
MACF1-201ENST00000289893 NOC3LQ8WTT2 800 aaKnown RBP4.53□□□□□ -1.68
MACF1-201ENST00000289893 ATAD2BQ9ULI0 1458 aa4.53□□□□□ -1.68
MACF1-201ENST00000289893 PDE4CQ08493 712 aa4.53□□□□□ -1.68
MACF1-201ENST00000289893 HSCBQ8IWL3 235 aa4.53□□□□□ -1.68
MACF1-201ENST00000289893 PDS5BQ9NTI5 1447 aa4.53□□□□□ -1.68
MACF1-201ENST00000289893 NPM1P06748 294 aaKnown RBP eCLIP4.53□□□□□ -1.68
MACF1-201ENST00000289893 CEP162Q5TB80 1403 aa4.53□□□□□ -1.68
MACF1-201ENST00000289893 ISY1Q9ULR0 285 aaKnown RBP4.53□□□□□ -1.68
MACF1-201ENST00000289893 ABCC8Q09428 1581 aa4.53□□□□□ -1.68
MACF1-201ENST00000289893 CECR2Q9BXF3 1484 aa4.52□□□□□ -1.69
MACF1-201ENST00000289893 CEP164Q9UPV0 1460 aa4.52□□□□□ -1.69
MACF1-201ENST00000289893 GNL2Q13823 731 aaKnown RBP4.52□□□□□ -1.69
MACF1-201ENST00000289893 BAZ1BQ9UIG0 1483 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms