RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 CUL7Q14999 1698 aa24.34■■□□□ 1.49
TPM1-202ENST00000288398 IGF1RP08069 1367 aa24.31■■□□□ 1.48
TPM1-202ENST00000288398 NPM1P06748 294 aaKnown RBP eCLIP24.28■■□□□ 1.48
TPM1-202ENST00000288398 KIAA0586Q9BVV6 1533 aa24.26■■□□□ 1.47
TPM1-202ENST00000288398 CARMIL1Q5VZK9 1371 aa24.22■■□□□ 1.47
TPM1-202ENST00000288398 AEBP2Q6ZN18 517 aaPredicted RBP24.14■■□□□ 1.45
TPM1-202ENST00000288398 CARMIL2Q6F5E8 1435 aa24.11■■□□□ 1.45
TPM1-202ENST00000288398 TTBK1Q5TCY1 1321 aaPredicted RBP24.1■■□□□ 1.45
TPM1-202ENST00000288398 FAM69CQ0P6D2 419 aa24.1■■□□□ 1.45
TPM1-202ENST00000288398 ADCY10Q96PN6 1610 aa24.08■■□□□ 1.45
TPM1-202ENST00000288398 MAPKBP1O60336 1514 aa24.08■■□□□ 1.45
TPM1-202ENST00000288398 PTPRGP23470 1445 aa24.08■■□□□ 1.44
TPM1-202ENST00000288398 KIF13AQ9H1H9 1805 aa24.07■■□□□ 1.44
TPM1-202ENST00000288398 ABCC10Q5T3U5 1492 aa24.06■■□□□ 1.44
TPM1-202ENST00000288398 IQGAP2Q13576 1575 aa24.05■■□□□ 1.44
TPM1-202ENST00000288398 TNIKQ9UKE5 1360 aa24.03■■□□□ 1.44
TPM1-202ENST00000288398 RAPGEF2Q9Y4G8 1499 aa24■■□□□ 1.43
TPM1-202ENST00000288398 DIP2BQ9P265 1576 aa23.97■■□□□ 1.43
TPM1-202ENST00000288398 ABCC2Q92887 1545 aa23.91■■□□□ 1.42
TPM1-202ENST00000288398 UACAQ9BZF9 1416 aa23.87■■□□□ 1.41
TPM1-202ENST00000288398 DISP1Q96F81 1524 aa23.87■■□□□ 1.41
TPM1-202ENST00000288398 UGGT2Q9NYU1 1516 aa23.86■■□□□ 1.41
TPM1-202ENST00000288398 UHRF1BP1LA0JNW5 1464 aa23.85■■□□□ 1.41
TPM1-202ENST00000288398 PLB1Q6P1J6 1458 aa23.84■■□□□ 1.41
TPM1-202ENST00000288398 ASXL2Q76L83 1435 aa23.83■■□□□ 1.4
TPM1-202ENST00000288398 KDM6BO15054 1643 aa23.82■■□□□ 1.4
TPM1-202ENST00000288398 TSPOAP1O95153 1857 aa23.82■■□□□ 1.4
TPM1-202ENST00000288398 KIAA0556O60303 1618 aa23.81■■□□□ 1.4
TPM1-202ENST00000288398 CTTNBP2Q8WZ74 1663 aa23.78■■□□□ 1.4
TPM1-202ENST00000288398 GOLGA3Q08378 1498 aa23.77■■□□□ 1.4
TPM1-202ENST00000288398 FAM9AQ8IZU1 332 aaPredicted RBP23.75■■□□□ 1.39
TPM1-202ENST00000288398 KDM5BQ9UGL1 1544 aa23.73■■□□□ 1.39
TPM1-202ENST00000288398 GLI2P10070 1586 aa23.72■■□□□ 1.39
TPM1-202ENST00000288398 PRXQ9BXM0 1461 aa23.7■■□□□ 1.38
TPM1-202ENST00000288398 ZCCHC11Q5TAX3 1644 aaKnown RBP23.69■■□□□ 1.38
TPM1-202ENST00000288398 EPRSP07814 1512 aaKnown RBP23.66■■□□□ 1.38
TPM1-202ENST00000288398 TEX14Q8IWB6 1497 aa23.63■■□□□ 1.37
TPM1-202ENST00000288398 WDR7Q9Y4E6 1490 aa23.62■■□□□ 1.37
TPM1-202ENST00000288398 CSRNP3Q8WYN3 585 aa23.6■■□□□ 1.37
TPM1-202ENST00000288398 MAP3K4Q9Y6R4 1608 aa23.59■■□□□ 1.37
TPM1-202ENST00000288398 PPRC1Q5VV67 1664 aaKnown RBP23.58■■□□□ 1.37
TPM1-202ENST00000288398 ABCA8O94911 1581 aa23.56■■□□□ 1.36
TPM1-202ENST00000288398 EEA1Q15075 1411 aa23.54■■□□□ 1.36
TPM1-202ENST00000288398 P3H3Q8IVL6 736 aa23.54■■□□□ 1.36
TPM1-202ENST00000288398 KCNH8Q96L42 1107 aa23.54■■□□□ 1.36
TPM1-202ENST00000288398 CD109Q6YHK3 1445 aa23.49■■□□□ 1.35
TPM1-202ENST00000288398 KDM4FA0A1W2PPD8 638 aa23.48■■□□□ 1.35
TPM1-202ENST00000288398 ARID3CA6NKF2 412 aa23.48■■□□□ 1.35
TPM1-202ENST00000288398 RANGAP1P46060 587 aaPredicted RBP23.45■■□□□ 1.34
TPM1-202ENST00000288398 CFAP43Q8NDM7 1665 aa23.44■■□□□ 1.34
TPM1-202ENST00000288398 COL17A1Q9UMD9 1497 aaPredicted RBP23.43■■□□□ 1.34
TPM1-202ENST00000288398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.42■■□□□ 1.34
TPM1-202ENST00000288398 HNRNPUL2Q1KMD3 747 aaKnown RBP23.42■■□□□ 1.34
TPM1-202ENST00000288398 MAGI3Q5TCQ9 1506 aa23.42■■□□□ 1.34
TPM1-202ENST00000288398 SAMD9Q5K651 1589 aa23.41■■□□□ 1.34
TPM1-202ENST00000288398 ATP10BO94823 1461 aa23.37■■□□□ 1.33
TPM1-202ENST00000288398 ADGRL1O94910 1474 aa23.37■■□□□ 1.33
TPM1-202ENST00000288398 RAPGEF6Q8TEU7 1601 aa23.36■■□□□ 1.33
TPM1-202ENST00000288398 FHOD3Q2V2M9 1422 aa23.3■■□□□ 1.32
TPM1-202ENST00000288398 KIF21BO75037 1637 aa23.29■■□□□ 1.32
TPM1-202ENST00000288398 EFCAB5A4FU69 1503 aa23.26■■□□□ 1.31
TPM1-202ENST00000288398 PHLDB1Q86UU1 1377 aa23.26■■□□□ 1.31
TPM1-202ENST00000288398 ABCA9Q8IUA7 1624 aa23.26■■□□□ 1.31
TPM1-202ENST00000288398 NUP153P49790 1475 aaKnown RBP23.24■■□□□ 1.31
TPM1-202ENST00000288398 PLEKHD1A6NEE1 506 aa23.23■■□□□ 1.31
TPM1-202ENST00000288398 UBTFP17480 764 aaKnown RBP23.23■■□□□ 1.31
TPM1-202ENST00000288398 ARAP3Q8WWN8 1544 aa23.23■■□□□ 1.31
TPM1-202ENST00000288398 EHMT2Q96KQ7 1210 aa23.22■■□□□ 1.31
TPM1-202ENST00000288398 NEO1Q92859 1461 aa23.17■■□□□ 1.3
TPM1-202ENST00000288398 CHIC1Q5VXU3 224 aa23.14■■□□□ 1.29
TPM1-202ENST00000288398 ATP1B4Q9UN42 357 aaPredicted RBP23.13■■□□□ 1.29
TPM1-202ENST00000288398 RAPGEF3O95398 923 aa23.12■■□□□ 1.29
TPM1-202ENST00000288398 FMN1Q68DA7 1419 aa23.08■■□□□ 1.29
TPM1-202ENST00000288398 ARID4BQ4LE39 1312 aaPredicted RBP23.07■■□□□ 1.28
TPM1-202ENST00000288398 CFAP74Q9C0B2 1584 aa23.06■■□□□ 1.28
TPM1-202ENST00000288398 FANCAO15360 1455 aa23.05■■□□□ 1.28
TPM1-202ENST00000288398 CDK11AQ9UQ88 783 aaPredicted RBP23.04■■□□□ 1.28
TPM1-202ENST00000288398 DENND4BO75064 1496 aaPredicted RBP23.04■■□□□ 1.28
TPM1-202ENST00000288398 CDK13Q14004 1512 aaKnown RBP23.03■■□□□ 1.28
TPM1-202ENST00000288398 HECW1Q76N89 1606 aa23.03■■□□□ 1.28
TPM1-202ENST00000288398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.03■■□□□ 1.28
TPM1-202ENST00000288398 HECW2Q9P2P5 1572 aa23.02■■□□□ 1.28
TPM1-202ENST00000288398 AKNAQ7Z591 1439 aa23.02■■□□□ 1.28
TPM1-202ENST00000288398 ARHGAP35Q9NRY4 1499 aa22.99■■□□□ 1.27
TPM1-202ENST00000288398 TTC37Q6PGP7 1564 aa22.99■■□□□ 1.27
TPM1-202ENST00000288398 FRMPD1Q5SYB0 1578 aa22.98■■□□□ 1.27
TPM1-202ENST00000288398 ARHGEF40Q8TER5 1519 aa22.94■■□□□ 1.26
TPM1-202ENST00000288398 CLIP1P30622 1438 aa22.92■■□□□ 1.26
TPM1-202ENST00000288398 RICTORQ6R327 1708 aa22.92■■□□□ 1.26
TPM1-202ENST00000288398 PLCH2O75038 1416 aa22.91■■□□□ 1.26
TPM1-202ENST00000288398 PTPRMP28827 1452 aa22.91■■□□□ 1.26
TPM1-202ENST00000288398 ADAMTSL3P82987 1691 aa22.9■■□□□ 1.26
TPM1-202ENST00000288398 EFCAB2Q5VUJ9 269 aa22.9■■□□□ 1.26
TPM1-202ENST00000288398 POGZQ7Z3K3 1410 aa22.9■■□□□ 1.26
TPM1-202ENST00000288398 BCORL1Q5H9F3 1711 aa22.89■■□□□ 1.26
TPM1-202ENST00000288398 KIF14Q15058 1648 aa22.89■■□□□ 1.25
TPM1-202ENST00000288398 ZFYVE16Q7Z3T8 1539 aa22.88■■□□□ 1.25
TPM1-202ENST00000288398 SCAPERQ9BY12 1400 aa22.88■■□□□ 1.25
TPM1-202ENST00000288398 ZMYM4Q5VZL5 1548 aa22.87■■□□□ 1.25
TPM1-202ENST00000288398 MAGI2Q86UL8 1455 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms