RNA–Protein interactions for RNA: ENST00000287844.6

ABCF2-202, Transcript of ATP binding cassette subfamily F member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCF2, Length 3,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF2-202ENST00000287844 PODXL2Q9NZ53 605 aa12.27□□□□□ -0.45
ABCF2-202ENST00000287844 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
ABCF2-202ENST00000287844 TOP2AP11388 1531 aaKnown RBP12.24□□□□□ -0.45
ABCF2-202ENST00000287844 NOP58Q9Y2X3 529 aaKnown RBP12.23□□□□□ -0.45
ABCF2-202ENST00000287844 BICRAQ9NZM4 1560 aa12.22□□□□□ -0.45
ABCF2-202ENST00000287844 NPM3O75607 178 aaKnown RBP12.22□□□□□ -0.45
ABCF2-202ENST00000287844 RTL5Q5HYW3 569 aaPredicted RBP12.21□□□□□ -0.46
ABCF2-202ENST00000287844 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
ABCF2-202ENST00000287844 CEP162Q5TB80 1403 aa12.17□□□□□ -0.46
ABCF2-202ENST00000287844 CCDC88BA6NC98 1476 aa12.17□□□□□ -0.46
ABCF2-202ENST00000287844 PPP6R1Q9UPN7 881 aa12.16□□□□□ -0.46
ABCF2-202ENST00000287844 PAK3O75914 559 aaPredicted RBP12.15□□□□□ -0.46
ABCF2-202ENST00000287844 TRIM52Q96A61 297 aa12.14□□□□□ -0.47
ABCF2-202ENST00000287844 HIRIP3Q9BW71 556 aaPredicted RBP12.13□□□□□ -0.47
ABCF2-202ENST00000287844 ATP1B4Q9UN42 357 aaPredicted RBP12.13□□□□□ -0.47
ABCF2-202ENST00000287844 ABCC8Q09428 1581 aa12.12□□□□□ -0.47
ABCF2-202ENST00000287844 PLEKHG5O94827 1062 aa12.11□□□□□ -0.47
ABCF2-202ENST00000287844 IRX6P78412 446 aaPredicted RBP12.08□□□□□ -0.47
ABCF2-202ENST00000287844 PEG3Q9GZU2 1588 aa12.08□□□□□ -0.48
ABCF2-202ENST00000287844 SENP3-EIF4A1A0A087X0R7 540 aa12.08□□□□□ -0.48
ABCF2-202ENST00000287844 DHX57Q6P158 1386 aaKnown RBP12.05□□□□□ -0.48
ABCF2-202ENST00000287844 FBLN2P98095 1184 aa12.04□□□□□ -0.48
ABCF2-202ENST00000287844 C11orf95C9JLR9 678 aaPredicted RBP12.04□□□□□ -0.48
ABCF2-202ENST00000287844 KDM2AQ9Y2K7 1162 aa12.04□□□□□ -0.48
ABCF2-202ENST00000287844 TNIKQ9UKE5 1360 aa12.04□□□□□ -0.48
ABCF2-202ENST00000287844 DDX10Q13206 875 aaKnown RBP12.02□□□□□ -0.49
ABCF2-202ENST00000287844 PPP4R2Q9NY27 417 aa12.02□□□□□ -0.49
ABCF2-202ENST00000287844 WASHC2AQ641Q2 1341 aa12.01□□□□□ -0.49
ABCF2-202ENST00000287844 CCER2I3L3R5 266 aa12.01□□□□□ -0.49
ABCF2-202ENST00000287844 ZBTB47Q9UFB7 747 aaPredicted RBP12.01□□□□□ -0.49
ABCF2-202ENST00000287844 IPO9Q96P70 1041 aaKnown RBP12□□□□□ -0.49
ABCF2-202ENST00000287844 ANP32AP39687 249 aaKnown RBP12□□□□□ -0.49
ABCF2-202ENST00000287844 GLIPR1L2Q4G1C9 344 aa12□□□□□ -0.49
ABCF2-202ENST00000287844 RSPH6AQ9H0K4 717 aa11.98□□□□□ -0.49
ABCF2-202ENST00000287844 WASHC2CQ9Y4E1 1318 aa11.97□□□□□ -0.49
ABCF2-202ENST00000287844 BRPF3Q9ULD4 1205 aa11.97□□□□□ -0.49
ABCF2-202ENST00000287844 SOGA1O94964 1423 aa11.96□□□□□ -0.49
ABCF2-202ENST00000287844 ATAD2BQ9ULI0 1458 aa11.96□□□□□ -0.49
ABCF2-202ENST00000287844 ZMYND15Q9H091 742 aa11.95□□□□□ -0.5
ABCF2-202ENST00000287844 ANP32CO43423 234 aa11.95□□□□□ -0.5
ABCF2-202ENST00000287844 B4GALNT3Q6L9W6 998 aa11.94□□□□□ -0.5
ABCF2-202ENST00000287844 PPP4R3CPQ6ZMV5 832 aa11.93□□□□□ -0.5
ABCF2-202ENST00000287844 USP35Q9P2H5 1018 aa11.93□□□□□ -0.5
ABCF2-202ENST00000287844 RUSC2Q8N2Y8 1516 aa11.93□□□□□ -0.5
ABCF2-202ENST00000287844 NEFMP07197 916 aa11.93□□□□□ -0.5
ABCF2-202ENST00000287844 C14orf37Q86TY3 774 aa11.93□□□□□ -0.5
ABCF2-202ENST00000287844 VSIG10Q8N0Z9 540 aa11.93□□□□□ -0.5
ABCF2-202ENST00000287844 PPP1R15AO75807 674 aaPredicted RBP11.92□□□□□ -0.5
ABCF2-202ENST00000287844 TMEM132AQ24JP5 1023 aa11.91□□□□□ -0.5
ABCF2-202ENST00000287844 POLR3GLQ9BT43 218 aa11.91□□□□□ -0.5
ABCF2-202ENST00000287844 HNRNPUQ00839 825 aaKnown RBP eCLIP11.9□□□□□ -0.5
ABCF2-202ENST00000287844 BAZ1BQ9UIG0 1483 aaKnown RBP11.9□□□□□ -0.5
ABCF2-202ENST00000287844 SYNJ1O43426 1573 aa11.89□□□□□ -0.51
ABCF2-202ENST00000287844 EEA1Q15075 1411 aa11.87□□□□□ -0.51
ABCF2-202ENST00000287844 LAS1LQ9Y4W2 734 aaKnown RBP11.87□□□□□ -0.51
ABCF2-202ENST00000287844 NPM2Q86SE8 214 aaKnown RBP11.85□□□□□ -0.51
ABCF2-202ENST00000287844 GSE1Q14687 1217 aa11.83□□□□□ -0.52
ABCF2-202ENST00000287844 SENP3Q9H4L4 574 aaPredicted RBP11.82□□□□□ -0.52
ABCF2-202ENST00000287844 PPM1GO15355 546 aaPredicted RBP11.82□□□□□ -0.52
ABCF2-202ENST00000287844 FAM43AQ8N2R8 423 aa11.82□□□□□ -0.52
ABCF2-202ENST00000287844 GOLGA3Q08378 1498 aa11.8□□□□□ -0.52
ABCF2-202ENST00000287844 VPS8Q8N3P4 1428 aa11.78□□□□□ -0.52
ABCF2-202ENST00000287844 CLIP1P30622 1438 aa11.78□□□□□ -0.52
ABCF2-202ENST00000287844 KIF21BO75037 1637 aa11.77□□□□□ -0.52
ABCF2-202ENST00000287844 FAM50AQ14320 339 aaKnown RBP11.76□□□□□ -0.53
ABCF2-202ENST00000287844 HMGXB3Q12766 1538 aa11.76□□□□□ -0.53
ABCF2-202ENST00000287844 TOP2BQ02880 1626 aa11.75□□□□□ -0.53
ABCF2-202ENST00000287844 FRAT1Q92837 279 aaPredicted RBP11.74□□□□□ -0.53
ABCF2-202ENST00000287844 NCAPD3P42695 1498 aa11.74□□□□□ -0.53
ABCF2-202ENST00000287844 WDR97A6NE52 1622 aa11.74□□□□□ -0.53
ABCF2-202ENST00000287844 CEP164Q9UPV0 1460 aa11.73□□□□□ -0.53
ABCF2-202ENST00000287844 BIVM-ERCC5R4GMW8 1640 aa11.73□□□□□ -0.53
ABCF2-202ENST00000287844 P3H3Q8IVL6 736 aa11.73□□□□□ -0.53
ABCF2-202ENST00000287844 FOXD4L1Q9NU39 408 aa11.73□□□□□ -0.53
ABCF2-202ENST00000287844 HSP90AA2PQ14568 343 aaPredicted RBP11.72□□□□□ -0.53
ABCF2-202ENST00000287844 SIN3AQ96ST3 1273 aa11.71□□□□□ -0.53
ABCF2-202ENST00000287844 A0A0U1RQG5 324 aaPredicted RBP11.71□□□□□ -0.54
ABCF2-202ENST00000287844 CUX2O14529 1486 aa11.7□□□□□ -0.54
ABCF2-202ENST00000287844 RRP9O43818 475 aaKnown RBP11.69□□□□□ -0.54
ABCF2-202ENST00000287844 MAPKBP1O60336 1514 aa11.68□□□□□ -0.54
ABCF2-202ENST00000287844 RAPGEF2Q9Y4G8 1499 aa11.68□□□□□ -0.54
ABCF2-202ENST00000287844 NFKBIBQ15653 356 aa11.68□□□□□ -0.54
ABCF2-202ENST00000287844 RBM10P98175 930 aaKnown RBP11.67□□□□□ -0.54
ABCF2-202ENST00000287844 FAM9BQ8IZU0 186 aa11.66□□□□□ -0.54
ABCF2-202ENST00000287844 DCAF11Q8TEB1 546 aa11.66□□□□□ -0.54
ABCF2-202ENST00000287844 DNAJC5BQ9UF47 199 aa11.66□□□□□ -0.54
ABCF2-202ENST00000287844 HSP90AA1P07900 732 aaKnown RBP11.65□□□□□ -0.54
ABCF2-202ENST00000287844 CUX1P39880 1505 aa11.65□□□□□ -0.54
ABCF2-202ENST00000287844 AAMPQ13685 434 aa11.64□□□□□ -0.55
ABCF2-202ENST00000287844 NAP1L5Q96NT1 182 aaPredicted RBP11.64□□□□□ -0.55
ABCF2-202ENST00000287844 CFTRP13569 1480 aa11.63□□□□□ -0.55
ABCF2-202ENST00000287844 FGD1P98174 961 aa11.63□□□□□ -0.55
ABCF2-202ENST00000287844 RRAGDQ9NQL2 400 aaPredicted RBP11.63□□□□□ -0.55
ABCF2-202ENST00000287844 ZBED9Q6R2W3 1325 aa11.63□□□□□ -0.55
ABCF2-202ENST00000287844 RAB3GAP2Q9H2M9 1393 aa11.62□□□□□ -0.55
ABCF2-202ENST00000287844 RRBP1Q9P2E9 1410 aaKnown RBP11.62□□□□□ -0.55
ABCF2-202ENST00000287844 ARID3CA6NKF2 412 aa11.62□□□□□ -0.55
ABCF2-202ENST00000287844 CFAP44Q96MT7 982 aa11.62□□□□□ -0.55
ABCF2-202ENST00000287844 PRDM2Q13029 1718 aa11.61□□□□□ -0.55
ABCF2-202ENST00000287844 PDE4AP27815 886 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms