RNA–Protein interactions for RNA: ENST00000285243.6

ANKRD40-201, Transcript of ankyrin repeat domain 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD40, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD40-201ENST00000285243 HNRNPUQ00839 825 aaKnown RBP eCLIP26.39■■□□□ 1.81
ANKRD40-201ENST00000285243 KANK4Q5T7N3 995 aaPredicted RBP26.38■■□□□ 1.81
ANKRD40-201ENST00000285243 NPM1P06748 294 aaKnown RBP eCLIP26.37■■□□□ 1.81
ANKRD40-201ENST00000285243 CUX2O14529 1486 aa26.36■■□□□ 1.81
ANKRD40-201ENST00000285243 RGL3Q3MIN7 710 aa26.31■■□□□ 1.8
ANKRD40-201ENST00000285243 VPS8Q8N3P4 1428 aa26.31■■□□□ 1.8
ANKRD40-201ENST00000285243 CARMIL1Q5VZK9 1371 aa26.3■■□□□ 1.8
ANKRD40-201ENST00000285243 TDRD9Q8NDG6 1382 aaKnown RBP26.28■■□□□ 1.8
ANKRD40-201ENST00000285243 PLEKHD1A6NEE1 506 aa26.28■■□□□ 1.8
ANKRD40-201ENST00000285243 CFDP1Q9UEE9 299 aaPredicted RBP26.24■■□□□ 1.79
ANKRD40-201ENST00000285243 TOP2AP11388 1531 aaKnown RBP26.21■■□□□ 1.79
ANKRD40-201ENST00000285243 RUSC2Q8N2Y8 1516 aa26.21■■□□□ 1.79
ANKRD40-201ENST00000285243 SLC24A1O60721 1099 aa26.2■■□□□ 1.79
ANKRD40-201ENST00000285243 IRX6P78412 446 aaPredicted RBP26.18■■□□□ 1.78
ANKRD40-201ENST00000285243 STAG3Q9UJ98 1225 aa26.18■■□□□ 1.78
ANKRD40-201ENST00000285243 SUPT16HQ9Y5B9 1047 aaKnown RBP26.16■■□□□ 1.78
ANKRD40-201ENST00000285243 RTL5Q5HYW3 569 aaPredicted RBP26.16■■□□□ 1.78
ANKRD40-201ENST00000285243 CCNB3Q8WWL7 1395 aa26.15■■□□□ 1.78
ANKRD40-201ENST00000285243 ERCC6Q03468 1493 aa26.14■■□□□ 1.78
ANKRD40-201ENST00000285243 MRS2Q9HD23 443 aa26.12■■□□□ 1.77
ANKRD40-201ENST00000285243 ESF1Q9H501 851 aaKnown RBP26.12■■□□□ 1.77
ANKRD40-201ENST00000285243 TMC1Q8TDI8 760 aa26.08■■□□□ 1.77
ANKRD40-201ENST00000285243 EIF4G2P78344 907 aaKnown RBP eCLIP26.07■■□□□ 1.76
ANKRD40-201ENST00000285243 CANXP27824 592 aaKnown RBP26.05■■□□□ 1.76
ANKRD40-201ENST00000285243 FOXD1Q16676 465 aa26.05■■□□□ 1.76
ANKRD40-201ENST00000285243 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
ANKRD40-201ENST00000285243 EIF4G1Q04637 1599 aaKnown RBP26.03■■□□□ 1.76
ANKRD40-201ENST00000285243 RAPGEF2Q9Y4G8 1499 aa25.97■■□□□ 1.75
ANKRD40-201ENST00000285243 SMARCA2P51531 1590 aa25.96■■□□□ 1.75
ANKRD40-201ENST00000285243 SMARCA4P51532 1647 aa25.93■■□□□ 1.74
ANKRD40-201ENST00000285243 PLEKHG5O94827 1062 aa25.92■■□□□ 1.74
ANKRD40-201ENST00000285243 CADPSQ9ULU8 1353 aa25.92■■□□□ 1.74
ANKRD40-201ENST00000285243 NPM2Q86SE8 214 aaKnown RBP25.91■■□□□ 1.74
ANKRD40-201ENST00000285243 ANP32EQ9BTT0 268 aa25.85■■□□□ 1.73
ANKRD40-201ENST00000285243 ANP32AP39687 249 aaKnown RBP25.85■■□□□ 1.73
ANKRD40-201ENST00000285243 RAB3GAP2Q9H2M9 1393 aa25.85■■□□□ 1.73
ANKRD40-201ENST00000285243 DHX57Q6P158 1386 aaKnown RBP25.84■■□□□ 1.73
ANKRD40-201ENST00000285243 NEFMP07197 916 aa25.84■■□□□ 1.73
ANKRD40-201ENST00000285243 FHAD1B1AJZ9 1412 aa25.83■■□□□ 1.73
ANKRD40-201ENST00000285243 SETD5Q9C0A6 1442 aa25.82■■□□□ 1.72
ANKRD40-201ENST00000285243 CARD11Q9BXL7 1154 aa25.81■■□□□ 1.72
ANKRD40-201ENST00000285243 FHOD3Q2V2M9 1422 aa25.81■■□□□ 1.72
ANKRD40-201ENST00000285243 TIMELESSQ9UNS1 1208 aa25.79■■□□□ 1.72
ANKRD40-201ENST00000285243 CCDC136Q96JN2 1154 aa25.76■■□□□ 1.71
ANKRD40-201ENST00000285243 PDS5BQ9NTI5 1447 aa25.75■■□□□ 1.71
ANKRD40-201ENST00000285243 DCAF11Q8TEB1 546 aa25.73■■□□□ 1.71
ANKRD40-201ENST00000285243 WDR43Q15061 677 aaKnown RBP eCLIP25.69■■□□□ 1.7
ANKRD40-201ENST00000285243 CCER2I3L3R5 266 aa25.68■■□□□ 1.7
ANKRD40-201ENST00000285243 ZBTB47Q9UFB7 747 aaPredicted RBP25.67■■□□□ 1.7
ANKRD40-201ENST00000285243 TSHZ2Q9NRE2 1034 aa25.66■■□□□ 1.7
ANKRD40-201ENST00000285243 PKD2Q13563 968 aa25.64■■□□□ 1.7
ANKRD40-201ENST00000285243 TNNT2P45379 298 aaPredicted RBP25.63■■□□□ 1.69
ANKRD40-201ENST00000285243 PPP1R15AO75807 674 aaPredicted RBP25.63■■□□□ 1.69
ANKRD40-201ENST00000285243 ARID4BQ4LE39 1312 aaPredicted RBP25.62■■□□□ 1.69
ANKRD40-201ENST00000285243 MLECQ14165 292 aa25.61■■□□□ 1.69
ANKRD40-201ENST00000285243 NBR1Q14596 966 aa25.61■■□□□ 1.69
ANKRD40-201ENST00000285243 NEUROD2Q15784 382 aa25.59■■□□□ 1.69
ANKRD40-201ENST00000285243 ARHGAP35Q9NRY4 1499 aa25.59■■□□□ 1.69
ANKRD40-201ENST00000285243 GGT6Q6P531 493 aa25.57■■□□□ 1.68
ANKRD40-201ENST00000285243 JPH4Q96JJ6 628 aa25.57■■□□□ 1.68
ANKRD40-201ENST00000285243 CC2D1BQ5T0F9 858 aaKnown RBP25.56■■□□□ 1.68
ANKRD40-201ENST00000285243 RBM19Q9Y4C8 960 aaKnown RBP25.56■■□□□ 1.68
ANKRD40-201ENST00000285243 FANCD2Q9BXW9 1451 aa25.56■■□□□ 1.68
ANKRD40-201ENST00000285243 PPM1GO15355 546 aaPredicted RBP25.56■■□□□ 1.68
ANKRD40-201ENST00000285243 HNRNPMP52272 730 aaKnown RBP eCLIP25.56■■□□□ 1.68
ANKRD40-201ENST00000285243 HSPA5P11021 654 aaKnown RBP25.54■■□□□ 1.68
ANKRD40-201ENST00000285243 MPHOSPH9Q99550 1183 aa25.54■■□□□ 1.68
ANKRD40-201ENST00000285243 RAD54L2Q9Y4B4 1467 aa25.54■■□□□ 1.68
ANKRD40-201ENST00000285243 SAFB2Q14151 953 aaKnown RBP eCLIP25.54■■□□□ 1.68
ANKRD40-201ENST00000285243 PPP4R2Q9NY27 417 aa25.52■■□□□ 1.68
ANKRD40-201ENST00000285243 IGF1RP08069 1367 aa25.51■■□□□ 1.67
ANKRD40-201ENST00000285243 KIF21BO75037 1637 aa25.5■■□□□ 1.67
ANKRD40-201ENST00000285243 ZBTB7CA1YPR0 619 aa25.49■■□□□ 1.67
ANKRD40-201ENST00000285243 DNAJC5BQ9UF47 199 aa25.49■■□□□ 1.67
ANKRD40-201ENST00000285243 KNSTRNQ9Y448 316 aa25.48■■□□□ 1.67
ANKRD40-201ENST00000285243 FMN1Q68DA7 1419 aa25.48■■□□□ 1.67
ANKRD40-201ENST00000285243 C14orf37Q86TY3 774 aa25.47■■□□□ 1.67
ANKRD40-201ENST00000285243 B4GALNT3Q6L9W6 998 aa25.47■■□□□ 1.67
ANKRD40-201ENST00000285243 L3MBTL2Q969R5 705 aa25.46■■□□□ 1.67
ANKRD40-201ENST00000285243 NUP155O75694 1391 aa25.43■■□□□ 1.66
ANKRD40-201ENST00000285243 FGD5Q6ZNL6 1462 aa25.4■■□□□ 1.66
ANKRD40-201ENST00000285243 CARMIL2Q6F5E8 1435 aa25.38■■□□□ 1.65
ANKRD40-201ENST00000285243 SYNJ1O43426 1573 aa25.38■■□□□ 1.65
ANKRD40-201ENST00000285243 ZNF644Q9H582 1327 aaPredicted RBP25.34■■□□□ 1.65
ANKRD40-201ENST00000285243 NUTM2DQ5VT03 806 aaPredicted RBP25.33■■□□□ 1.65
ANKRD40-201ENST00000285243 POGKQ9P215 609 aa25.32■■□□□ 1.64
ANKRD40-201ENST00000285243 STK26Q9P289 416 aa25.32■■□□□ 1.64
ANKRD40-201ENST00000285243 NESP48681 1621 aa25.31■■□□□ 1.64
ANKRD40-201ENST00000285243 TRHP20396 242 aaPredicted RBP25.31■■□□□ 1.64
ANKRD40-201ENST00000285243 KIF3BO15066 747 aa25.3■■□□□ 1.64
ANKRD40-201ENST00000285243 SOX12O15370 315 aa25.3■■□□□ 1.64
ANKRD40-201ENST00000285243 ARAP1Q96P48 1450 aa25.29■■□□□ 1.64
ANKRD40-201ENST00000285243 AQRO60306 1485 aaKnown RBP eCLIP25.29■■□□□ 1.64
ANKRD40-201ENST00000285243 EFCAB2Q5VUJ9 269 aa25.29■■□□□ 1.64
ANKRD40-201ENST00000285243 NCAPD3P42695 1498 aa25.27■■□□□ 1.64
ANKRD40-201ENST00000285243 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.26■■□□□ 1.63
ANKRD40-201ENST00000285243 A0A0G2JS52 829 aa25.25■■□□□ 1.63
ANKRD40-201ENST00000285243 PHLDB1Q86UU1 1377 aa25.22■■□□□ 1.63
ANKRD40-201ENST00000285243 LMOD2Q6P5Q4 547 aa25.22■■□□□ 1.63
ANKRD40-201ENST00000285243 LAS1LQ9Y4W2 734 aaKnown RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms