RNA–Protein interactions for RNA: ENST00000283249.6

ITGB6-201, Transcript of integrin subunit beta 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB6, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-201ENST00000283249 BECN1Q14457 450 aa12.45□□□□□ -0.42
ITGB6-201ENST00000283249 RSF1Q96T23 1441 aaPredicted RBP12.43□□□□□ -0.42
ITGB6-201ENST00000283249 TSPY4P0CV99 314 aa12.42□□□□□ -0.42
ITGB6-201ENST00000283249 TSPY10P0CW01 314 aa12.42□□□□□ -0.42
ITGB6-201ENST00000283249 PRKCSHP14314 528 aaPredicted RBP12.42□□□□□ -0.42
ITGB6-201ENST00000283249 ARXQ96QS3 562 aa12.42□□□□□ -0.42
ITGB6-201ENST00000283249 ERICH6BQ5W0A0 696 aa12.41□□□□□ -0.42
ITGB6-201ENST00000283249 KDM2AQ9Y2K7 1162 aa12.4□□□□□ -0.42
ITGB6-201ENST00000283249 NOP58Q9Y2X3 529 aaKnown RBP12.38□□□□□ -0.43
ITGB6-201ENST00000283249 TRIM44Q96DX7 344 aaPredicted RBP12.38□□□□□ -0.43
ITGB6-201ENST00000283249 TIMELESSQ9UNS1 1208 aa12.37□□□□□ -0.43
ITGB6-201ENST00000283249 CHGAP10645 457 aaKnown RBP12.37□□□□□ -0.43
ITGB6-201ENST00000283249 RRP7BPQ9NSQ0 103 aa12.36□□□□□ -0.43
ITGB6-201ENST00000283249 CCER2I3L3R5 266 aa12.34□□□□□ -0.43
ITGB6-201ENST00000283249 GOLGA6L22H0YM25 854 aa12.34□□□□□ -0.43
ITGB6-201ENST00000283249 RBM19Q9Y4C8 960 aaKnown RBP12.34□□□□□ -0.43
ITGB6-201ENST00000283249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.33□□□□□ -0.44
ITGB6-201ENST00000283249 CEP164Q9UPV0 1460 aa12.33□□□□□ -0.44
ITGB6-201ENST00000283249 MYH16Q9H6N6 1097 aa12.32□□□□□ -0.44
ITGB6-201ENST00000283249 WRNQ14191 1432 aaPredicted RBP eCLIP12.31□□□□□ -0.44
ITGB6-201ENST00000283249 SIN3AQ96ST3 1273 aa12.3□□□□□ -0.44
ITGB6-201ENST00000283249 B4GALNT3Q6L9W6 998 aa12.29□□□□□ -0.44
ITGB6-201ENST00000283249 LAS1LQ9Y4W2 734 aaKnown RBP12.28□□□□□ -0.44
ITGB6-201ENST00000283249 CDCA8Q53HL2 280 aa12.27□□□□□ -0.45
ITGB6-201ENST00000283249 DEKP35659 375 aaKnown RBP12.27□□□□□ -0.45
ITGB6-201ENST00000283249 STAG3Q9UJ98 1225 aa12.26□□□□□ -0.45
ITGB6-201ENST00000283249 NCLP19338 710 aaKnown RBP12.26□□□□□ -0.45
ITGB6-201ENST00000283249 CCNB3Q8WWL7 1395 aa12.26□□□□□ -0.45
ITGB6-201ENST00000283249 KNSTRNQ9Y448 316 aa12.24□□□□□ -0.45
ITGB6-201ENST00000283249 CARD11Q9BXL7 1154 aa12.24□□□□□ -0.45
ITGB6-201ENST00000283249 TNNT2P45379 298 aaPredicted RBP12.24□□□□□ -0.45
ITGB6-201ENST00000283249 RTN4Q9NQC3 1192 aaKnown RBP12.24□□□□□ -0.45
ITGB6-201ENST00000283249 NACADO15069 1562 aa12.23□□□□□ -0.45
ITGB6-201ENST00000283249 KIF27Q86VH2 1401 aa12.23□□□□□ -0.45
ITGB6-201ENST00000283249 TSHZ2Q9NRE2 1034 aa12.23□□□□□ -0.45
ITGB6-201ENST00000283249 ESF1Q9H501 851 aaKnown RBP12.22□□□□□ -0.45
ITGB6-201ENST00000283249 RB1CC1Q8TDY2 1594 aa12.22□□□□□ -0.45
ITGB6-201ENST00000283249 CFAP53Q96M91 514 aa12.22□□□□□ -0.45
ITGB6-201ENST00000283249 SENP3-EIF4A1A0A087X0R7 540 aa12.21□□□□□ -0.46
ITGB6-201ENST00000283249 RGS3P49796 1198 aa12.21□□□□□ -0.46
ITGB6-201ENST00000283249 NAP1L5Q96NT1 182 aaPredicted RBP12.2□□□□□ -0.46
ITGB6-201ENST00000283249 RGL3Q3MIN7 710 aa12.2□□□□□ -0.46
ITGB6-201ENST00000283249 PTMAP06454 111 aaKnown RBP12.18□□□□□ -0.46
ITGB6-201ENST00000283249 PLEKHD1A6NEE1 506 aa12.18□□□□□ -0.46
ITGB6-201ENST00000283249 FTSJ3Q8IY81 847 aaKnown RBP12.17□□□□□ -0.46
ITGB6-201ENST00000283249 NPM1P06748 294 aaKnown RBP eCLIP12.17□□□□□ -0.46
ITGB6-201ENST00000283249 CFDP1Q9UEE9 299 aaPredicted RBP12.17□□□□□ -0.46
ITGB6-201ENST00000283249 L1TD1Q5T7N2 865 aaKnown RBP12.16□□□□□ -0.46
ITGB6-201ENST00000283249 MS4A1P11836 297 aa12.15□□□□□ -0.46
ITGB6-201ENST00000283249 VPS8Q8N3P4 1428 aa12.15□□□□□ -0.46
ITGB6-201ENST00000283249 DNTTIP2Q5QJE6 756 aaKnown RBP12.14□□□□□ -0.47
ITGB6-201ENST00000283249 CASC1Q6TDU7 716 aa12.14□□□□□ -0.47
ITGB6-201ENST00000283249 FHAD1B1AJZ9 1412 aa12.14□□□□□ -0.47
ITGB6-201ENST00000283249 CHMP4BQ9H444 224 aaKnown RBP12.14□□□□□ -0.47
ITGB6-201ENST00000283249 SETD5Q9C0A6 1442 aa12.14□□□□□ -0.47
ITGB6-201ENST00000283249 CHMP7Q8WUX9 453 aaPredicted RBP12.13□□□□□ -0.47
ITGB6-201ENST00000283249 TCERG1O14776 1098 aaKnown RBP12.12□□□□□ -0.47
ITGB6-201ENST00000283249 FRAT1Q92837 279 aaPredicted RBP12.11□□□□□ -0.47
ITGB6-201ENST00000283249 SOGA1O94964 1423 aa12.1□□□□□ -0.47
ITGB6-201ENST00000283249 HSPA5P11021 654 aaKnown RBP12.1□□□□□ -0.47
ITGB6-201ENST00000283249 NEUROD2Q15784 382 aa12.1□□□□□ -0.47
ITGB6-201ENST00000283249 NUDCQ9Y266 331 aa12.1□□□□□ -0.47
ITGB6-201ENST00000283249 HSP90AB1P08238 724 aaKnown RBP12.09□□□□□ -0.47
ITGB6-201ENST00000283249 MAPK8IP3Q9UPT6 1336 aa12.08□□□□□ -0.48
ITGB6-201ENST00000283249 PPP1R15AO75807 674 aaPredicted RBP12.08□□□□□ -0.48
ITGB6-201ENST00000283249 IPO9Q96P70 1041 aaKnown RBP12.07□□□□□ -0.48
ITGB6-201ENST00000283249 CC2D1BQ5T0F9 858 aaKnown RBP12.07□□□□□ -0.48
ITGB6-201ENST00000283249 HSCBQ8IWL3 235 aa12.07□□□□□ -0.48
ITGB6-201ENST00000283249 TMF1P82094 1093 aa12.07□□□□□ -0.48
ITGB6-201ENST00000283249 ZRSR1Q15695 479 aaKnown RBP12.06□□□□□ -0.48
ITGB6-201ENST00000283249 RCAN3Q9UKA8 241 aa12.05□□□□□ -0.48
ITGB6-201ENST00000283249 BAZ1BQ9UIG0 1483 aaKnown RBP12.04□□□□□ -0.48
ITGB6-201ENST00000283249 BAZ1AQ9NRL2 1556 aaPredicted RBP12.04□□□□□ -0.48
ITGB6-201ENST00000283249 KANK4Q5T7N3 995 aaPredicted RBP12.04□□□□□ -0.48
ITGB6-201ENST00000283249 RAB3GAP2Q9H2M9 1393 aa12.04□□□□□ -0.48
ITGB6-201ENST00000283249 DCAF11Q8TEB1 546 aa12.03□□□□□ -0.48
ITGB6-201ENST00000283249 MSNP26038 577 aaKnown RBP12.02□□□□□ -0.48
ITGB6-201ENST00000283249 CFAP44Q96MT7 982 aa12.02□□□□□ -0.49
ITGB6-201ENST00000283249 RALBP1Q15311 655 aa12.01□□□□□ -0.49
ITGB6-201ENST00000283249 USP35Q9P2H5 1018 aa12.01□□□□□ -0.49
ITGB6-201ENST00000283249 CARMIL1Q5VZK9 1371 aa12.01□□□□□ -0.49
ITGB6-201ENST00000283249 KCNH8Q96L42 1107 aa12.01□□□□□ -0.49
ITGB6-201ENST00000283249 PNNQ9H307 717 aaKnown RBP12.01□□□□□ -0.49
ITGB6-201ENST00000283249 PLCB2Q00722 1185 aa12□□□□□ -0.49
ITGB6-201ENST00000283249 CECR2Q9BXF3 1484 aa12□□□□□ -0.49
ITGB6-201ENST00000283249 KTN1Q86UP2 1357 aaKnown RBP11.99□□□□□ -0.49
ITGB6-201ENST00000283249 PTMSP20962 102 aa11.99□□□□□ -0.49
ITGB6-201ENST00000283249 PDE3BQ13370 1112 aa11.98□□□□□ -0.49
ITGB6-201ENST00000283249 CDK11BP21127 795 aaKnown RBP11.98□□□□□ -0.49
ITGB6-201ENST00000283249 CHAF1AQ13111 956 aaPredicted RBP11.98□□□□□ -0.49
ITGB6-201ENST00000283249 GBP4Q96PP9 640 aa11.98□□□□□ -0.49
ITGB6-201ENST00000283249 ARHGAP35Q9NRY4 1499 aa11.98□□□□□ -0.49
ITGB6-201ENST00000283249 NRDCO43847 1150 aa11.98□□□□□ -0.49
ITGB6-201ENST00000283249 FANCIQ9NVI1 1328 aa11.96□□□□□ -0.49
ITGB6-201ENST00000283249 U2SURPO15042 1029 aaKnown RBP11.96□□□□□ -0.49
ITGB6-201ENST00000283249 GOLGA6L6A8MZA4 724 aa11.95□□□□□ -0.5
ITGB6-201ENST00000283249 RWDD1Q9H446 243 aaPredicted RBP11.95□□□□□ -0.5
ITGB6-201ENST00000283249 MPHOSPH9Q99550 1183 aa11.95□□□□□ -0.5
ITGB6-201ENST00000283249 HAP1P54257 671 aaPredicted RBP11.94□□□□□ -0.5
ITGB6-201ENST00000283249 TPRNQ4KMQ1 711 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms