RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 TARBP1Q13395 1621 aaKnown RBP10.89□□□□□ -0.67
SPARCL1-201ENST00000282470 PCF11O94913 1555 aaKnown RBP10.89□□□□□ -0.67
SPARCL1-201ENST00000282470 AQRO60306 1485 aaKnown RBP eCLIP10.88□□□□□ -0.67
SPARCL1-201ENST00000282470 LRRC9Q6ZRR7 1453 aa10.87□□□□□ -0.67
SPARCL1-201ENST00000282470 FYCO1Q9BQS8 1478 aa10.87□□□□□ -0.67
SPARCL1-201ENST00000282470 GAPVD1Q14C86 1478 aa10.86□□□□□ -0.67
SPARCL1-201ENST00000282470 SAMD9Q5K651 1589 aa10.86□□□□□ -0.67
SPARCL1-201ENST00000282470 CCNB3Q8WWL7 1395 aa10.86□□□□□ -0.67
SPARCL1-201ENST00000282470 CLSPNQ9HAW4 1339 aa10.86□□□□□ -0.67
SPARCL1-201ENST00000282470 AEBP2Q6ZN18 517 aaPredicted RBP10.85□□□□□ -0.67
SPARCL1-201ENST00000282470 CASKIN1Q8WXD9 1431 aa10.84□□□□□ -0.67
SPARCL1-201ENST00000282470 DNAJC5BQ9UF47 199 aa10.84□□□□□ -0.67
SPARCL1-201ENST00000282470 PBRM1Q86U86 1689 aa10.83□□□□□ -0.68
SPARCL1-201ENST00000282470 FHOD3Q2V2M9 1422 aa10.82□□□□□ -0.68
SPARCL1-201ENST00000282470 DHX57Q6P158 1386 aaKnown RBP10.81□□□□□ -0.68
SPARCL1-201ENST00000282470 TDRD9Q8NDG6 1382 aaKnown RBP10.81□□□□□ -0.68
SPARCL1-201ENST00000282470 SNAPC4Q5SXM2 1469 aa10.81□□□□□ -0.68
SPARCL1-201ENST00000282470 MRC2Q9UBG0 1479 aa10.81□□□□□ -0.68
SPARCL1-201ENST00000282470 FMN1Q68DA7 1419 aa10.8□□□□□ -0.68
SPARCL1-201ENST00000282470 THOC2Q8NI27 1593 aaKnown RBP10.8□□□□□ -0.68
SPARCL1-201ENST00000282470 ADAMTS12P58397 1594 aa10.78□□□□□ -0.68
SPARCL1-201ENST00000282470 PHLDB1Q86UU1 1377 aa10.78□□□□□ -0.68
SPARCL1-201ENST00000282470 WDR62O43379 1518 aa10.77□□□□□ -0.68
SPARCL1-201ENST00000282470 ZNF316A6NFI3 1004 aaPredicted RBP10.77□□□□□ -0.69
SPARCL1-201ENST00000282470 LRRIQ1Q96JM4 1722 aa10.77□□□□□ -0.69
SPARCL1-201ENST00000282470 DIEXFQ68CQ4 756 aaKnown RBP10.77□□□□□ -0.69
SPARCL1-201ENST00000282470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.76□□□□□ -0.69
SPARCL1-201ENST00000282470 GRIN2BQ13224 1484 aa10.75□□□□□ -0.69
SPARCL1-201ENST00000282470 IFT140Q96RY7 1462 aa10.73□□□□□ -0.69
SPARCL1-201ENST00000282470 P3H3Q8IVL6 736 aa10.73□□□□□ -0.69
SPARCL1-201ENST00000282470 IQGAP2Q13576 1575 aa10.72□□□□□ -0.69
SPARCL1-201ENST00000282470 RAB3GAP2Q9H2M9 1393 aa10.71□□□□□ -0.7
SPARCL1-201ENST00000282470 SETD5Q9C0A6 1442 aa10.7□□□□□ -0.7
SPARCL1-201ENST00000282470 MAPKBP1O60336 1514 aa10.7□□□□□ -0.7
SPARCL1-201ENST00000282470 EHBP1L1Q8N3D4 1523 aa10.7□□□□□ -0.7
SPARCL1-201ENST00000282470 SUPT6HQ7KZ85 1726 aaKnown RBP10.69□□□□□ -0.7
SPARCL1-201ENST00000282470 CCDC18Q5T9S5 1454 aa10.69□□□□□ -0.7
SPARCL1-201ENST00000282470 UGGT2Q9NYU1 1516 aa10.69□□□□□ -0.7
SPARCL1-201ENST00000282470 HECW1Q76N89 1606 aa10.68□□□□□ -0.7
SPARCL1-201ENST00000282470 FGD6Q6ZV73 1430 aa10.68□□□□□ -0.7
SPARCL1-201ENST00000282470 ARHGEF11O15085 1522 aa10.68□□□□□ -0.7
SPARCL1-201ENST00000282470 PELP1Q8IZL8 1130 aaKnown RBP10.67□□□□□ -0.7
SPARCL1-201ENST00000282470 EIF4G3O43432 1585 aaKnown RBP10.66□□□□□ -0.7
SPARCL1-201ENST00000282470 ZNF608Q9ULD9 1512 aaPredicted RBP10.66□□□□□ -0.7
SPARCL1-201ENST00000282470 NCOA2Q15596 1464 aa10.65□□□□□ -0.7
SPARCL1-201ENST00000282470 MTUS2Q5JR59 1369 aa10.65□□□□□ -0.7
SPARCL1-201ENST00000282470 MYOM3Q5VTT5 1437 aa10.64□□□□□ -0.71
SPARCL1-201ENST00000282470 MAGI3Q5TCQ9 1506 aa10.64□□□□□ -0.71
SPARCL1-201ENST00000282470 ATP1B4Q9UN42 357 aaPredicted RBP10.64□□□□□ -0.71
SPARCL1-201ENST00000282470 ITGAEP38570 1179 aa10.63□□□□□ -0.71
SPARCL1-201ENST00000282470 KIAA0586Q9BVV6 1533 aa10.63□□□□□ -0.71
SPARCL1-201ENST00000282470 FAM50AQ14320 339 aaKnown RBP10.62□□□□□ -0.71
SPARCL1-201ENST00000282470 KIAA0556O60303 1618 aa10.62□□□□□ -0.71
SPARCL1-201ENST00000282470 EPRSP07814 1512 aaKnown RBP10.62□□□□□ -0.71
SPARCL1-201ENST00000282470 GRIN2AQ12879 1464 aa10.61□□□□□ -0.71
SPARCL1-201ENST00000282470 MAGI1Q96QZ7 1491 aaPredicted RBP10.61□□□□□ -0.71
SPARCL1-201ENST00000282470 PTPN23Q9H3S7 1636 aa10.61□□□□□ -0.71
SPARCL1-201ENST00000282470 TCOF1Q13428 1488 aaKnown RBP10.61□□□□□ -0.71
SPARCL1-201ENST00000282470 HFM1A2PYH4 1435 aa10.6□□□□□ -0.71
SPARCL1-201ENST00000282470 DISP1Q96F81 1524 aa10.6□□□□□ -0.71
SPARCL1-201ENST00000282470 ERCC6Q03468 1493 aa10.59□□□□□ -0.71
SPARCL1-201ENST00000282470 ACIN1Q9UKV3 1341 aaKnown RBP10.58□□□□□ -0.72
SPARCL1-201ENST00000282470 PTPRKQ15262 1439 aa10.58□□□□□ -0.72
SPARCL1-201ENST00000282470 SCAF1Q9H7N4 1312 aaKnown RBP10.58□□□□□ -0.72
SPARCL1-201ENST00000282470 GCC2Q8IWJ2 1684 aa10.57□□□□□ -0.72
SPARCL1-201ENST00000282470 SYNJ2O15056 1496 aa10.57□□□□□ -0.72
SPARCL1-201ENST00000282470 CDK13Q14004 1512 aaKnown RBP10.57□□□□□ -0.72
SPARCL1-201ENST00000282470 CEP170Q5SW79 1584 aa10.56□□□□□ -0.72
SPARCL1-201ENST00000282470 MIA2Q96PC5 1412 aa10.56□□□□□ -0.72
SPARCL1-201ENST00000282470 CENPBP07199 599 aaPredicted RBP10.56□□□□□ -0.72
SPARCL1-201ENST00000282470 TIMELESSQ9UNS1 1208 aa10.56□□□□□ -0.72
SPARCL1-201ENST00000282470 RAPGEF6Q8TEU7 1601 aa10.55□□□□□ -0.72
SPARCL1-201ENST00000282470 AKNAQ7Z591 1439 aa10.55□□□□□ -0.72
SPARCL1-201ENST00000282470 NAIPQ13075 1403 aa10.55□□□□□ -0.72
SPARCL1-201ENST00000282470 UACAQ9BZF9 1416 aa10.55□□□□□ -0.72
SPARCL1-201ENST00000282470 MIER1Q8N108 512 aa10.54□□□□□ -0.72
SPARCL1-201ENST00000282470 NEUROD1Q13562 356 aa10.54□□□□□ -0.72
SPARCL1-201ENST00000282470 NUP153P49790 1475 aaKnown RBP10.53□□□□□ -0.72
SPARCL1-201ENST00000282470 NUP160Q12769 1436 aa10.52□□□□□ -0.72
SPARCL1-201ENST00000282470 ADCY10Q96PN6 1610 aa10.5□□□□□ -0.73
SPARCL1-201ENST00000282470 DNMT1P26358 1616 aaKnown RBP10.48□□□□□ -0.73
SPARCL1-201ENST00000282470 SIN3AQ96ST3 1273 aa10.47□□□□□ -0.73
SPARCL1-201ENST00000282470 ITSN2Q9NZM3 1697 aa10.47□□□□□ -0.73
SPARCL1-201ENST00000282470 MYT1Q01538 1121 aa10.46□□□□□ -0.73
SPARCL1-201ENST00000282470 ROCK1Q13464 1354 aa10.45□□□□□ -0.74
SPARCL1-201ENST00000282470 KDM6BO15054 1643 aa10.45□□□□□ -0.74
SPARCL1-201ENST00000282470 TROQ12816 1431 aaPredicted RBP10.45□□□□□ -0.74
SPARCL1-201ENST00000282470 CARMIL2Q6F5E8 1435 aa10.45□□□□□ -0.74
SPARCL1-201ENST00000282470 CHMP7Q8WUX9 453 aaPredicted RBP10.45□□□□□ -0.74
SPARCL1-201ENST00000282470 ABCA8O94911 1581 aa10.44□□□□□ -0.74
SPARCL1-201ENST00000282470 KDM5BQ9UGL1 1544 aa10.44□□□□□ -0.74
SPARCL1-201ENST00000282470 DENND4BO75064 1496 aaPredicted RBP10.44□□□□□ -0.74
SPARCL1-201ENST00000282470 PPP1R15AO75807 674 aaPredicted RBP10.44□□□□□ -0.74
SPARCL1-201ENST00000282470 DAPK1P53355 1430 aa10.44□□□□□ -0.74
SPARCL1-201ENST00000282470 PLB1Q6P1J6 1458 aa10.43□□□□□ -0.74
SPARCL1-201ENST00000282470 CDK11AQ9UQ88 783 aaPredicted RBP10.43□□□□□ -0.74
SPARCL1-201ENST00000282470 CROCC2H7BZ55 1655 aa10.42□□□□□ -0.74
SPARCL1-201ENST00000282470 ADGBQ8N7X0 1667 aa10.42□□□□□ -0.74
SPARCL1-201ENST00000282470 ABCC5O15440 1437 aa10.42□□□□□ -0.74
SPARCL1-201ENST00000282470 KIF14Q15058 1648 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms