RNA–Protein interactions for RNA: ENST00000276826.5

ARHGAP39-201, Transcript of Rho GTPase activating protein 39, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARHGAP39, Length 4,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP39-201ENST00000276826 PPM1GO15355 546 aaPredicted RBP20.55■□□□□ 0.88
ARHGAP39-201ENST00000276826 WDR43Q15061 677 aaKnown RBP eCLIP20.55■□□□□ 0.88
ARHGAP39-201ENST00000276826 CHMP7Q8WUX9 453 aaPredicted RBP20.54■□□□□ 0.88
ARHGAP39-201ENST00000276826 ERICH6BQ5W0A0 696 aa20.53■□□□□ 0.88
ARHGAP39-201ENST00000276826 NOP58Q9Y2X3 529 aaKnown RBP20.53■□□□□ 0.88
ARHGAP39-201ENST00000276826 PPP4R2Q9NY27 417 aa20.53■□□□□ 0.88
ARHGAP39-201ENST00000276826 BECN1Q14457 450 aa20.52■□□□□ 0.88
ARHGAP39-201ENST00000276826 TRIM44Q96DX7 344 aaPredicted RBP20.52■□□□□ 0.88
ARHGAP39-201ENST00000276826 LAS1LQ9Y4W2 734 aaKnown RBP20.48■□□□□ 0.87
ARHGAP39-201ENST00000276826 CEP162Q5TB80 1403 aa20.48■□□□□ 0.87
ARHGAP39-201ENST00000276826 WRNQ14191 1432 aaPredicted RBP eCLIP20.48■□□□□ 0.879e-6■■■■■ 50.1
ARHGAP39-201ENST00000276826 RBM19Q9Y4C8 960 aaKnown RBP20.46■□□□□ 0.87
ARHGAP39-201ENST00000276826 NPM1P06748 294 aaKnown RBP eCLIP20.46■□□□□ 0.87
ARHGAP39-201ENST00000276826 KDM2AQ9Y2K7 1162 aa20.45■□□□□ 0.86
ARHGAP39-201ENST00000276826 SENP3-EIF4A1A0A087X0R7 540 aa20.45■□□□□ 0.86
ARHGAP39-201ENST00000276826 DEKP35659 375 aaKnown RBP20.43■□□□□ 0.86
ARHGAP39-201ENST00000276826 B4GALNT3Q6L9W6 998 aa20.41■□□□□ 0.86
ARHGAP39-201ENST00000276826 MTUS2Q5JR59 1369 aa20.39■□□□□ 0.85
ARHGAP39-201ENST00000276826 ERCC6Q03468 1493 aa20.37■□□□□ 0.85
ARHGAP39-201ENST00000276826 CHGAP10645 457 aaKnown RBP20.36■□□□□ 0.85
ARHGAP39-201ENST00000276826 MROH2BQ7Z745 1585 aa20.36■□□□□ 0.85
ARHGAP39-201ENST00000276826 NAP1L5Q96NT1 182 aaPredicted RBP20.35■□□□□ 0.85
ARHGAP39-201ENST00000276826 EEA1Q15075 1411 aa20.34■□□□□ 0.85
ARHGAP39-201ENST00000276826 GOLGA6L22H0YM25 854 aa20.34■□□□□ 0.85
ARHGAP39-201ENST00000276826 RRP7BPQ9NSQ0 103 aa20.33■□□□□ 0.85
ARHGAP39-201ENST00000276826 TSHZ2Q9NRE2 1034 aa20.3■□□□□ 0.84
ARHGAP39-201ENST00000276826 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.3■□□□□ 0.84
ARHGAP39-201ENST00000276826 GOLGA3Q08378 1498 aa20.3■□□□□ 0.84
ARHGAP39-201ENST00000276826 KIF27Q86VH2 1401 aa20.3■□□□□ 0.84
ARHGAP39-201ENST00000276826 SIN3AQ96ST3 1273 aa20.29■□□□□ 0.84
ARHGAP39-201ENST00000276826 TNNT2P45379 298 aaPredicted RBP20.29■□□□□ 0.84
ARHGAP39-201ENST00000276826 TSPY4P0CV99 314 aa20.27■□□□□ 0.83
ARHGAP39-201ENST00000276826 TSPY10P0CW01 314 aa20.27■□□□□ 0.83
ARHGAP39-201ENST00000276826 MYH16Q9H6N6 1097 aa20.27■□□□□ 0.83
ARHGAP39-201ENST00000276826 TNIKQ9UKE5 1360 aa20.26■□□□□ 0.83
ARHGAP39-201ENST00000276826 SMARCA2P51531 1590 aa20.26■□□□□ 0.83
ARHGAP39-201ENST00000276826 RGS3P49796 1198 aa20.25■□□□□ 0.83
ARHGAP39-201ENST00000276826 NCLP19338 710 aaKnown RBP20.24■□□□□ 0.83
ARHGAP39-201ENST00000276826 PTMAP06454 111 aaKnown RBP20.21■□□□□ 0.83
ARHGAP39-201ENST00000276826 CCER2I3L3R5 266 aa20.2■□□□□ 0.82
ARHGAP39-201ENST00000276826 DNTTIP2Q5QJE6 756 aaKnown RBP20.18■□□□□ 0.82
ARHGAP39-201ENST00000276826 CCDC88BA6NC98 1476 aa20.18■□□□□ 0.82
ARHGAP39-201ENST00000276826 ESF1Q9H501 851 aaKnown RBP20.17■□□□□ 0.82
ARHGAP39-201ENST00000276826 STAG3Q9UJ98 1225 aa20.12■□□□□ 0.81
ARHGAP39-201ENST00000276826 CARD11Q9BXL7 1154 aa20.1■□□□□ 0.81
ARHGAP39-201ENST00000276826 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
ARHGAP39-201ENST00000276826 RGL3Q3MIN7 710 aa20.09■□□□□ 0.81
ARHGAP39-201ENST00000276826 KNSTRNQ9Y448 316 aa20.09■□□□□ 0.81
ARHGAP39-201ENST00000276826 CEP164Q9UPV0 1460 aa20.09■□□□□ 0.81
ARHGAP39-201ENST00000276826 TIMELESSQ9UNS1 1208 aa20.08■□□□□ 0.8
ARHGAP39-201ENST00000276826 PLEKHD1A6NEE1 506 aa20.07■□□□□ 0.8
ARHGAP39-201ENST00000276826 FTSJ3Q8IY81 847 aaKnown RBP20.07■□□□□ 0.8
ARHGAP39-201ENST00000276826 CUX2O14529 1486 aa20.06■□□□□ 0.8
ARHGAP39-201ENST00000276826 KCNH8Q96L42 1107 aa20.06■□□□□ 0.8
ARHGAP39-201ENST00000276826 L1TD1Q5T7N2 865 aaKnown RBP20.06■□□□□ 0.8
ARHGAP39-201ENST00000276826 NEUROD2Q15784 382 aa20.04■□□□□ 0.8
ARHGAP39-201ENST00000276826 ATAD2BQ9ULI0 1458 aa20.03■□□□□ 0.8
ARHGAP39-201ENST00000276826 FRAT1Q92837 279 aaPredicted RBP20.03■□□□□ 0.8
ARHGAP39-201ENST00000276826 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.03■□□□□ 0.8
ARHGAP39-201ENST00000276826 CCNB3Q8WWL7 1395 aa20.03■□□□□ 0.8
ARHGAP39-201ENST00000276826 WIZO95785 1651 aa20.02■□□□□ 0.8
ARHGAP39-201ENST00000276826 TOP2AP11388 1531 aaKnown RBP20.01■□□□□ 0.79
ARHGAP39-201ENST00000276826 CDCA8Q53HL2 280 aa20■□□□□ 0.79
ARHGAP39-201ENST00000276826 CFAP53Q96M91 514 aa20■□□□□ 0.79
ARHGAP39-201ENST00000276826 CARMIL1Q5VZK9 1371 aa20■□□□□ 0.79
ARHGAP39-201ENST00000276826 CADPSQ9ULU8 1353 aa19.99■□□□□ 0.79
ARHGAP39-201ENST00000276826 HSP90AB1P08238 724 aaKnown RBP19.98■□□□□ 0.79
ARHGAP39-201ENST00000276826 TPRNQ4KMQ1 711 aa19.98■□□□□ 0.79
ARHGAP39-201ENST00000276826 SOGA1O94964 1423 aa19.98■□□□□ 0.79
ARHGAP39-201ENST00000276826 PLCB2Q00722 1185 aa19.97■□□□□ 0.79
ARHGAP39-201ENST00000276826 PLPPR3Q6T4P5 718 aa19.96■□□□□ 0.79
ARHGAP39-201ENST00000276826 CASC1Q6TDU7 716 aa19.96■□□□□ 0.79
ARHGAP39-201ENST00000276826 IPO9Q96P70 1041 aaKnown RBP19.95■□□□□ 0.78
ARHGAP39-201ENST00000276826 ARID4BQ4LE39 1312 aaPredicted RBP19.94■□□□□ 0.78
ARHGAP39-201ENST00000276826 SMARCA4P51532 1647 aa19.93■□□□□ 0.78
ARHGAP39-201ENST00000276826 PNNQ9H307 717 aaKnown RBP19.93■□□□□ 0.78
ARHGAP39-201ENST00000276826 TCERG1O14776 1098 aaKnown RBP19.93■□□□□ 0.78
ARHGAP39-201ENST00000276826 MSNP26038 577 aaKnown RBP19.93■□□□□ 0.78
ARHGAP39-201ENST00000276826 CC2D1BQ5T0F9 858 aaKnown RBP19.93■□□□□ 0.78
ARHGAP39-201ENST00000276826 ABCC8Q09428 1581 aa19.93■□□□□ 0.78
ARHGAP39-201ENST00000276826 HSCBQ8IWL3 235 aa19.92■□□□□ 0.78
ARHGAP39-201ENST00000276826 ZRSR1Q15695 479 aaKnown RBP19.91■□□□□ 0.78
ARHGAP39-201ENST00000276826 CDK11BP21127 795 aaKnown RBP19.9■□□□□ 0.78
ARHGAP39-201ENST00000276826 TDRD9Q8NDG6 1382 aaKnown RBP19.9■□□□□ 0.78
ARHGAP39-201ENST00000276826 HSPA5P11021 654 aaKnown RBP19.9■□□□□ 0.78
ARHGAP39-201ENST00000276826 SPRYD3Q8NCJ5 442 aa19.89■□□□□ 0.77
ARHGAP39-201ENST00000276826 CFDP1Q9UEE9 299 aaPredicted RBP19.87■□□□□ 0.77
ARHGAP39-201ENST00000276826 MS4A1P11836 297 aa19.86■□□□□ 0.77
ARHGAP39-201ENST00000276826 SLKQ9H2G2 1235 aaPredicted RBP19.86■□□□□ 0.77
ARHGAP39-201ENST00000276826 RCAN3Q9UKA8 241 aa19.85■□□□□ 0.77
ARHGAP39-201ENST00000276826 MAPK8IP3Q9UPT6 1336 aa19.85■□□□□ 0.77
ARHGAP39-201ENST00000276826 EIF4G1Q04637 1599 aaKnown RBP19.84■□□□□ 0.77
ARHGAP39-201ENST00000276826 GZF1Q9H116 711 aaPredicted RBP19.83■□□□□ 0.77
ARHGAP39-201ENST00000276826 SETD5Q9C0A6 1442 aa19.83■□□□□ 0.76
ARHGAP39-201ENST00000276826 CHAF1AQ13111 956 aaPredicted RBP19.81■□□□□ 0.76
ARHGAP39-201ENST00000276826 CHMP4BQ9H444 224 aaKnown RBP19.81■□□□□ 0.76
ARHGAP39-201ENST00000276826 NUDCQ9Y266 331 aa19.81■□□□□ 0.76
ARHGAP39-201ENST00000276826 SENP3Q9H4L4 574 aaPredicted RBP19.8■□□□□ 0.76
ARHGAP39-201ENST00000276826 VPS8Q8N3P4 1428 aa19.8■□□□□ 0.76
ARHGAP39-201ENST00000276826 FHAD1B1AJZ9 1412 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms