RNA–Protein interactions for RNA: ENST00000275815.3

EPHA1-201, Transcript of EPH receptor A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-201ENST00000275815 ADAMTS12P58397 1594 aa19.95■□□□□ 0.78
EPHA1-201ENST00000275815 CUX2O14529 1486 aa19.95■□□□□ 0.78
EPHA1-201ENST00000275815 CENPBP07199 599 aaPredicted RBP19.94■□□□□ 0.78
EPHA1-201ENST00000275815 AQRO60306 1485 aaKnown RBP eCLIP19.92■□□□□ 0.78
EPHA1-201ENST00000275815 NEUROD1Q13562 356 aa19.92■□□□□ 0.78
EPHA1-201ENST00000275815 ARHGAP35Q9NRY4 1499 aa19.91■□□□□ 0.78
EPHA1-201ENST00000275815 CLIP1P30622 1438 aa19.9■□□□□ 0.78
EPHA1-201ENST00000275815 ACIN1Q9UKV3 1341 aaKnown RBP19.89■□□□□ 0.77
EPHA1-201ENST00000275815 RAD54L2Q9Y4B4 1467 aa19.85■□□□□ 0.77
EPHA1-201ENST00000275815 GTF3C3Q9Y5Q9 886 aa19.84■□□□□ 0.77
EPHA1-201ENST00000275815 IFT140Q96RY7 1462 aa19.83■□□□□ 0.76
EPHA1-201ENST00000275815 LRRIQ1Q96JM4 1722 aa19.83■□□□□ 0.76
EPHA1-201ENST00000275815 ZNF316A6NFI3 1004 aaPredicted RBP19.79■□□□□ 0.76
EPHA1-201ENST00000275815 PELP1Q8IZL8 1130 aaKnown RBP19.79■□□□□ 0.76
EPHA1-201ENST00000275815 CARMIL1Q5VZK9 1371 aa19.77■□□□□ 0.76
EPHA1-201ENST00000275815 GAPVD1Q14C86 1478 aa19.77■□□□□ 0.75
EPHA1-201ENST00000275815 EIF4G3O43432 1585 aaKnown RBP19.76■□□□□ 0.75
EPHA1-201ENST00000275815 TIAM1Q13009 1591 aa19.76■□□□□ 0.75
EPHA1-201ENST00000275815 SNAPC4Q5SXM2 1469 aa19.73■□□□□ 0.75
EPHA1-201ENST00000275815 UGGT2Q9NYU1 1516 aa19.72■□□□□ 0.75
EPHA1-201ENST00000275815 FYCO1Q9BQS8 1478 aa19.7■□□□□ 0.74
EPHA1-201ENST00000275815 DNAJC5BQ9UF47 199 aa19.69■□□□□ 0.74
EPHA1-201ENST00000275815 PCF11O94913 1555 aaKnown RBP19.69■□□□□ 0.74
EPHA1-201ENST00000275815 RRBP1Q9P2E9 1410 aaKnown RBP19.68■□□□□ 0.74
EPHA1-201ENST00000275815 ITGAEP38570 1179 aa19.67■□□□□ 0.74
EPHA1-201ENST00000275815 FHAD1B1AJZ9 1412 aa19.67■□□□□ 0.74
EPHA1-201ENST00000275815 ARHGEF11O15085 1522 aa19.66■□□□□ 0.74
EPHA1-201ENST00000275815 GRIN2BQ13224 1484 aa19.65■□□□□ 0.74
EPHA1-201ENST00000275815 MAGI1Q96QZ7 1491 aaPredicted RBP19.62■□□□□ 0.73
EPHA1-201ENST00000275815 CASKIN1Q8WXD9 1431 aa19.6■□□□□ 0.73
EPHA1-201ENST00000275815 IQGAP2Q13576 1575 aa19.6■□□□□ 0.73
EPHA1-201ENST00000275815 MIER1Q8N108 512 aa19.6■□□□□ 0.73
EPHA1-201ENST00000275815 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.54■□□□□ 0.72
EPHA1-201ENST00000275815 SHROOM2Q13796 1616 aa19.53■□□□□ 0.72
EPHA1-201ENST00000275815 KIAA0556O60303 1618 aa19.52■□□□□ 0.72
EPHA1-201ENST00000275815 ATP1B4Q9UN42 357 aaPredicted RBP19.52■□□□□ 0.71
EPHA1-201ENST00000275815 LRRC9Q6ZRR7 1453 aa19.51■□□□□ 0.71
EPHA1-201ENST00000275815 NUP160Q12769 1436 aa19.49■□□□□ 0.71
EPHA1-201ENST00000275815 CEP170Q5SW79 1584 aa19.49■□□□□ 0.71
EPHA1-201ENST00000275815 ADCY10Q96PN6 1610 aa19.49■□□□□ 0.71
EPHA1-201ENST00000275815 ZNF608Q9ULD9 1512 aaPredicted RBP19.48■□□□□ 0.71
EPHA1-201ENST00000275815 GRIN2AQ12879 1464 aa19.47■□□□□ 0.71
EPHA1-201ENST00000275815 KIAA0586Q9BVV6 1533 aa19.46■□□□□ 0.71
EPHA1-201ENST00000275815 HECW1Q76N89 1606 aa19.45■□□□□ 0.7
EPHA1-201ENST00000275815 DISP1Q96F81 1524 aa19.44■□□□□ 0.7
EPHA1-201ENST00000275815 FMN1Q68DA7 1419 aa19.44■□□□□ 0.7
EPHA1-201ENST00000275815 SYNJ2O15056 1496 aa19.44■□□□□ 0.7
EPHA1-201ENST00000275815 KANK4Q5T7N3 995 aaPredicted RBP19.43■□□□□ 0.7
EPHA1-201ENST00000275815 CCDC18Q5T9S5 1454 aa19.41■□□□□ 0.7
EPHA1-201ENST00000275815 EHBP1L1Q8N3D4 1523 aa19.4■□□□□ 0.7
EPHA1-201ENST00000275815 TDRD9Q8NDG6 1382 aaKnown RBP19.36■□□□□ 0.69
EPHA1-201ENST00000275815 SUPT6HQ7KZ85 1726 aaKnown RBP19.36■□□□□ 0.69
EPHA1-201ENST00000275815 TCOF1Q13428 1488 aaKnown RBP19.35■□□□□ 0.69
EPHA1-201ENST00000275815 P3H3Q8IVL6 736 aa19.33■□□□□ 0.69
EPHA1-201ENST00000275815 MAGI3Q5TCQ9 1506 aa19.33■□□□□ 0.68
EPHA1-201ENST00000275815 RAPGEF6Q8TEU7 1601 aa19.32■□□□□ 0.68
EPHA1-201ENST00000275815 ABCA8O94911 1581 aa19.3■□□□□ 0.68
EPHA1-201ENST00000275815 FAM50AQ14320 339 aaKnown RBP19.28■□□□□ 0.68
EPHA1-201ENST00000275815 GCC2Q8IWJ2 1684 aa19.28■□□□□ 0.68
EPHA1-201ENST00000275815 CHD1O14646 1710 aa19.28■□□□□ 0.68
EPHA1-201ENST00000275815 FHOD3Q2V2M9 1422 aa19.26■□□□□ 0.67
EPHA1-201ENST00000275815 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
EPHA1-201ENST00000275815 ERCC6Q03468 1493 aa19.23■□□□□ 0.67
EPHA1-201ENST00000275815 CROCC2H7BZ55 1655 aa19.21■□□□□ 0.67
EPHA1-201ENST00000275815 AKNAQ7Z591 1439 aa19.21■□□□□ 0.67
EPHA1-201ENST00000275815 EPRSP07814 1512 aaKnown RBP19.2■□□□□ 0.66
EPHA1-201ENST00000275815 DHX57Q6P158 1386 aaKnown RBP19.2■□□□□ 0.66
EPHA1-201ENST00000275815 CLSPNQ9HAW4 1339 aa19.19■□□□□ 0.66
EPHA1-201ENST00000275815 NUP153P49790 1475 aaKnown RBP19.16■□□□□ 0.66
EPHA1-201ENST00000275815 CCNB3Q8WWL7 1395 aa19.15■□□□□ 0.66
EPHA1-201ENST00000275815 ITSN2Q9NZM3 1697 aa19.15■□□□□ 0.66
EPHA1-201ENST00000275815 PHLDB1Q86UU1 1377 aa19.14■□□□□ 0.65
EPHA1-201ENST00000275815 PTPN23Q9H3S7 1636 aa19.14■□□□□ 0.65
EPHA1-201ENST00000275815 MIA2Q96PC5 1412 aa19.11■□□□□ 0.65
EPHA1-201ENST00000275815 DNMT1P26358 1616 aaKnown RBP19.09■□□□□ 0.65
EPHA1-201ENST00000275815 NCOA2Q15596 1464 aa19.09■□□□□ 0.65
EPHA1-201ENST00000275815 FGD6Q6ZV73 1430 aa19.08■□□□□ 0.65
EPHA1-201ENST00000275815 MAPKBP1O60336 1514 aa19.08■□□□□ 0.65
EPHA1-201ENST00000275815 HIRIP3Q9BW71 556 aaPredicted RBP19.08■□□□□ 0.64
EPHA1-201ENST00000275815 ADGBQ8N7X0 1667 aa19.07■□□□□ 0.64
EPHA1-201ENST00000275815 MYOM3Q5VTT5 1437 aa19.07■□□□□ 0.64
EPHA1-201ENST00000275815 SIN3AQ96ST3 1273 aa19.06■□□□□ 0.64
EPHA1-201ENST00000275815 DDX10Q13206 875 aaKnown RBP19.04■□□□□ 0.64
EPHA1-201ENST00000275815 CDC42BPAQ5VT25 1732 aa19.04■□□□□ 0.64
EPHA1-201ENST00000275815 RAB3GAP2Q9H2M9 1393 aa19.01■□□□□ 0.63
EPHA1-201ENST00000275815 BCANQ96GW7 911 aa19.01■□□□□ 0.63
EPHA1-201ENST00000275815 UHRF1BP1LA0JNW5 1464 aa19■□□□□ 0.63
EPHA1-201ENST00000275815 KDM5BQ9UGL1 1544 aa19■□□□□ 0.63
EPHA1-201ENST00000275815 ABCC10Q5T3U5 1492 aa18.99■□□□□ 0.63
EPHA1-201ENST00000275815 KCNH8Q96L42 1107 aa18.99■□□□□ 0.63
EPHA1-201ENST00000275815 HFM1A2PYH4 1435 aa18.99■□□□□ 0.63
EPHA1-201ENST00000275815 CDK13Q14004 1512 aaKnown RBP18.96■□□□□ 0.63
EPHA1-201ENST00000275815 PREX2Q70Z35 1606 aa18.96■□□□□ 0.63
EPHA1-201ENST00000275815 ADGRL2O95490 1459 aa18.95■□□□□ 0.62
EPHA1-201ENST00000275815 ARHGEF5Q12774 1597 aa18.95■□□□□ 0.62
EPHA1-201ENST00000275815 MAST1Q9Y2H9 1570 aa18.94■□□□□ 0.62
EPHA1-201ENST00000275815 SUPT16HQ9Y5B9 1047 aaKnown RBP18.92■□□□□ 0.62
EPHA1-201ENST00000275815 KIF14Q15058 1648 aa18.92■□□□□ 0.62
EPHA1-201ENST00000275815 SHANK2Q9UPX8 1470 aa18.91■□□□□ 0.62
EPHA1-201ENST00000275815 PTPRKQ15262 1439 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms