RNA–Protein interactions for RNA: ENST00000274695.8

CDKAL1-201, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKAL1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-201ENST00000274695 WRNQ14191 1432 aaPredicted RBP eCLIP9.72□□□□□ -0.85
CDKAL1-201ENST00000274695 PEG3Q9GZU2 1588 aa9.71□□□□□ -0.86
CDKAL1-201ENST00000274695 UNC13AQ9UPW8 1703 aa9.7□□□□□ -0.86
CDKAL1-201ENST00000274695 ZEB1P37275 1124 aaPredicted RBP9.69□□□□□ -0.86
CDKAL1-201ENST00000274695 TOP2AP11388 1531 aaKnown RBP9.69□□□□□ -0.86
CDKAL1-201ENST00000274695 MROH2BQ7Z745 1585 aa9.68□□□□□ -0.86
CDKAL1-201ENST00000274695 WIZO95785 1651 aa9.67□□□□□ -0.86
CDKAL1-201ENST00000274695 HS6ST3Q8IZP7 471 aa9.66□□□□□ -0.86
CDKAL1-201ENST00000274695 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.65□□□□□ -0.87
CDKAL1-201ENST00000274695 HNRNPUL2Q1KMD3 747 aaKnown RBP9.65□□□□□ -0.87
CDKAL1-201ENST00000274695 LMOD2Q6P5Q4 547 aa9.65□□□□□ -0.87
CDKAL1-201ENST00000274695 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.64□□□□□ -0.87
CDKAL1-201ENST00000274695 GTPBP6O43824 516 aaPredicted RBP9.64□□□□□ -0.87
CDKAL1-201ENST00000274695 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.63□□□□□ -0.875e-7■□□□□ 9.9
CDKAL1-201ENST00000274695 SMARCA4P51532 1647 aa9.63□□□□□ -0.87
CDKAL1-201ENST00000274695 RNF25Q96BH1 459 aaPredicted RBP9.62□□□□□ -0.87
CDKAL1-201ENST00000274695 PCGF6Q9BYE7 350 aa9.62□□□□□ -0.87
CDKAL1-201ENST00000274695 APLP2Q06481 763 aa9.61□□□□□ -0.87
CDKAL1-201ENST00000274695 NEUROD2Q15784 382 aa9.61□□□□□ -0.87
CDKAL1-201ENST00000274695 SMARCA2P51531 1590 aa9.61□□□□□ -0.87
CDKAL1-201ENST00000274695 PELP1Q8IZL8 1130 aaKnown RBP9.6□□□□□ -0.87
CDKAL1-201ENST00000274695 C1orf115Q9H7X2 142 aa9.6□□□□□ -0.87
CDKAL1-201ENST00000274695 ARID3AQ99856 593 aa9.59□□□□□ -0.87
CDKAL1-201ENST00000274695 CIZ1Q9ULV3 898 aaPredicted RBP9.58□□□□□ -0.88
CDKAL1-201ENST00000274695 CECR2Q9BXF3 1484 aa9.56□□□□□ -0.88
CDKAL1-201ENST00000274695 EEA1Q15075 1411 aa9.56□□□□□ -0.88
CDKAL1-201ENST00000274695 KIF21BO75037 1637 aa9.55□□□□□ -0.88
CDKAL1-201ENST00000274695 SLC24A3Q9HC58 644 aa9.53□□□□□ -0.88
CDKAL1-201ENST00000274695 KCNV2Q8TDN2 545 aa9.52□□□□□ -0.89
CDKAL1-201ENST00000274695 PPARGC1BQ86YN6 1023 aaKnown RBP9.51□□□□□ -0.89
CDKAL1-201ENST00000274695 ZMYND15Q9H091 742 aa9.51□□□□□ -0.89
CDKAL1-201ENST00000274695 LOC105371045A0A1W2PR82 267 aa9.51□□□□□ -0.89
CDKAL1-201ENST00000274695 PLCD3Q8N3E9 789 aa9.5□□□□□ -0.89
CDKAL1-201ENST00000274695 ZC3H15Q8WU90 426 aaKnown RBP9.5□□□□□ -0.89
CDKAL1-201ENST00000274695 NECTIN2Q92692 538 aa9.49□□□□□ -0.89
CDKAL1-201ENST00000274695 DCAF8L1A6NGE4 600 aa9.48□□□□□ -0.89
CDKAL1-201ENST00000274695 RSPH6AQ9H0K4 717 aa9.46□□□□□ -0.9
CDKAL1-201ENST00000274695 ARID3CA6NKF2 412 aa9.44□□□□□ -0.9
CDKAL1-201ENST00000274695 BIVM-ERCC5R4GMW8 1640 aa9.44□□□□□ -0.9
CDKAL1-201ENST00000274695 BICRAQ9NZM4 1560 aa9.44□□□□□ -0.9
CDKAL1-201ENST00000274695 TNIKQ9UKE5 1360 aa9.43□□□□□ -0.9
CDKAL1-201ENST00000274695 BAZ1BQ9UIG0 1483 aaKnown RBP9.43□□□□□ -0.9
CDKAL1-201ENST00000274695 CCDC88BA6NC98 1476 aa9.42□□□□□ -0.9
CDKAL1-201ENST00000274695 P3H3Q8IVL6 736 aa9.41□□□□□ -0.9
CDKAL1-201ENST00000274695 MIER1Q8N108 512 aa9.41□□□□□ -0.9
CDKAL1-201ENST00000274695 PRDM2Q13029 1718 aa9.4□□□□□ -0.9
CDKAL1-201ENST00000274695 CADPS2Q86UW7 1296 aa9.39□□□□□ -0.91
CDKAL1-201ENST00000274695 CCDC9Q9Y3X0 531 aaKnown RBP9.37□□□□□ -0.91
CDKAL1-201ENST00000274695 GPBP1L1Q9HC44 474 aaPredicted RBP9.37□□□□□ -0.91
CDKAL1-201ENST00000274695 POLA2Q14181 598 aa9.36□□□□□ -0.91
CDKAL1-201ENST00000274695 ERICH3Q5RHP9 1530 aa9.35□□□□□ -0.91
CDKAL1-201ENST00000274695 TRIM41Q8WV44 630 aa9.35□□□□□ -0.91
CDKAL1-201ENST00000274695 ABCC8Q09428 1581 aa9.35□□□□□ -0.91
CDKAL1-201ENST00000274695 CUX2O14529 1486 aa9.35□□□□□ -0.91
CDKAL1-201ENST00000274695 CEP162Q5TB80 1403 aa9.34□□□□□ -0.91
CDKAL1-201ENST00000274695 TOP2BQ02880 1626 aa9.34□□□□□ -0.91
CDKAL1-201ENST00000274695 STK25O00506 426 aa9.34□□□□□ -0.91
CDKAL1-201ENST00000274695 STAG3Q9UJ98 1225 aa9.34□□□□□ -0.91
CDKAL1-201ENST00000274695 GOLGA3Q08378 1498 aa9.34□□□□□ -0.92
CDKAL1-201ENST00000274695 SYNJ1O43426 1573 aa9.33□□□□□ -0.92
CDKAL1-201ENST00000274695 IL27Q8NEV9 243 aa9.32□□□□□ -0.92
CDKAL1-201ENST00000274695 IGSF3O75054 1194 aa9.31□□□□□ -0.92
CDKAL1-201ENST00000274695 ZBTB7CA1YPR0 619 aa9.3□□□□□ -0.92
CDKAL1-201ENST00000274695 APBB1O00213 710 aa9.3□□□□□ -0.92
CDKAL1-201ENST00000274695 CEP164Q9UPV0 1460 aa9.29□□□□□ -0.92
CDKAL1-201ENST00000274695 RIOK3O14730 519 aaKnown RBP9.29□□□□□ -0.92
CDKAL1-201ENST00000274695 PDIA4P13667 645 aaKnown RBP9.29□□□□□ -0.92
CDKAL1-201ENST00000274695 MKRN3Q13064 507 aaKnown RBP9.29□□□□□ -0.92
CDKAL1-201ENST00000274695 SEMA3EO15041 775 aa9.29□□□□□ -0.92
CDKAL1-201ENST00000274695 ZMYND10O75800 440 aa9.29□□□□□ -0.92
CDKAL1-201ENST00000274695 MYT1Q01538 1121 aa9.25□□□□□ -0.93
CDKAL1-201ENST00000274695 HMGXB3Q12766 1538 aa9.25□□□□□ -0.93
CDKAL1-201ENST00000274695 MAP3K1Q13233 1512 aa9.25□□□□□ -0.93
CDKAL1-201ENST00000274695 SPINK5Q9NQ38 1064 aaPredicted RBP9.24□□□□□ -0.93
CDKAL1-201ENST00000274695 ACIN1Q9UKV3 1341 aaKnown RBP9.23□□□□□ -0.93
CDKAL1-201ENST00000274695 SOGA1O94964 1423 aa9.22□□□□□ -0.93
CDKAL1-201ENST00000274695 BCL11BQ9C0K0 894 aaPredicted RBP9.22□□□□□ -0.93
CDKAL1-201ENST00000274695 VPS8Q8N3P4 1428 aa9.22□□□□□ -0.93
CDKAL1-201ENST00000274695 CLSPNQ9HAW4 1339 aa9.22□□□□□ -0.93
CDKAL1-201ENST00000274695 TESPA1A2RU30 521 aaPredicted RBP9.21□□□□□ -0.93
CDKAL1-201ENST00000274695 WDR70Q9NW82 654 aa9.21□□□□□ -0.94
CDKAL1-201ENST00000274695 PRXQ9BXM0 1461 aa9.2□□□□□ -0.94
CDKAL1-201ENST00000274695 STK24Q9Y6E0 443 aa9.2□□□□□ -0.94
CDKAL1-201ENST00000274695 ZNF428Q96B54 188 aa9.2□□□□□ -0.94
CDKAL1-201ENST00000274695 CCDC82Q8N4S0 544 aa9.19□□□□□ -0.94
CDKAL1-201ENST00000274695 KCTD17Q8N5Z5 321 aa9.18□□□□□ -0.94
CDKAL1-201ENST00000274695 RUSC2Q8N2Y8 1516 aa9.18□□□□□ -0.94
CDKAL1-201ENST00000274695 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.18□□□□□ -0.94
CDKAL1-201ENST00000274695 ZFP91Q96JP5 570 aaPredicted RBP9.18□□□□□ -0.94
CDKAL1-201ENST00000274695 KDM4CQ9H3R0 1056 aa9.18□□□□□ -0.94
CDKAL1-201ENST00000274695 ATAD2BQ9ULI0 1458 aa9.18□□□□□ -0.94
CDKAL1-201ENST00000274695 ZNF692Q9BU19 519 aaPredicted RBP9.18□□□□□ -0.94
CDKAL1-201ENST00000274695 RRBP1Q9P2E9 1410 aaKnown RBP9.17□□□□□ -0.94
CDKAL1-201ENST00000274695 CFAP43Q8NDM7 1665 aa9.16□□□□□ -0.94
CDKAL1-201ENST00000274695 VGFO15240 615 aaPredicted RBP9.16□□□□□ -0.94
CDKAL1-201ENST00000274695 PABPN1Q86U42 306 aaKnown RBP eCLIP9.15□□□□□ -0.94
CDKAL1-201ENST00000274695 BARGINQ6ZT62 677 aa9.15□□□□□ -0.94
CDKAL1-201ENST00000274695 CLIP1P30622 1438 aa9.15□□□□□ -0.95
CDKAL1-201ENST00000274695 RGS22Q8NE09 1264 aa9.14□□□□□ -0.95
CDKAL1-201ENST00000274695 NUBP1P53384 320 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms