RNA–Protein interactions for RNA: ENST00000274545.9

GABRA6-201, Transcript of gamma-aminobutyric acid type A receptor alpha6 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA6, Length 2,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA6-201ENST00000274545 AQRO60306 1485 aaKnown RBP eCLIP11.59□□□□□ -0.55
GABRA6-201ENST00000274545 ZEB1P37275 1124 aaPredicted RBP11.58□□□□□ -0.56
GABRA6-201ENST00000274545 KANK4Q5T7N3 995 aaPredicted RBP11.57□□□□□ -0.56
GABRA6-201ENST00000274545 WDR62O43379 1518 aa11.57□□□□□ -0.56
GABRA6-201ENST00000274545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.57□□□□□ -0.56
GABRA6-201ENST00000274545 IFT140Q96RY7 1462 aa11.55□□□□□ -0.56
GABRA6-201ENST00000274545 CCER1Q8TC90 406 aaPredicted RBP11.54□□□□□ -0.56
GABRA6-201ENST00000274545 ZNF608Q9ULD9 1512 aaPredicted RBP11.53□□□□□ -0.56
GABRA6-201ENST00000274545 FHAD1B1AJZ9 1412 aa11.52□□□□□ -0.57
GABRA6-201ENST00000274545 HNRNPUL2Q1KMD3 747 aaKnown RBP11.52□□□□□ -0.57
GABRA6-201ENST00000274545 GRIN2BQ13224 1484 aa11.52□□□□□ -0.57
GABRA6-201ENST00000274545 FHOD3Q2V2M9 1422 aa11.52□□□□□ -0.57
GABRA6-201ENST00000274545 ATP1B4Q9UN42 357 aaPredicted RBP11.51□□□□□ -0.57
GABRA6-201ENST00000274545 CTTNBP2Q8WZ74 1663 aa11.51□□□□□ -0.57
GABRA6-201ENST00000274545 PBRM1Q86U86 1689 aa11.5□□□□□ -0.57
GABRA6-201ENST00000274545 EFCAB5A4FU69 1503 aa11.5□□□□□ -0.57
GABRA6-201ENST00000274545 THOC2Q8NI27 1593 aaKnown RBP11.48□□□□□ -0.57
GABRA6-201ENST00000274545 ADAMTS12P58397 1594 aa11.46□□□□□ -0.58
GABRA6-201ENST00000274545 FMN1Q68DA7 1419 aa11.46□□□□□ -0.58
GABRA6-201ENST00000274545 MAP3K1Q13233 1512 aa11.45□□□□□ -0.58
GABRA6-201ENST00000274545 TIAM1Q13009 1591 aa11.45□□□□□ -0.58
GABRA6-201ENST00000274545 EIF4G3O43432 1585 aaKnown RBP11.44□□□□□ -0.58
GABRA6-201ENST00000274545 PCF11O94913 1555 aaKnown RBP11.44□□□□□ -0.58
GABRA6-201ENST00000274545 CASKIN1Q8WXD9 1431 aa11.43□□□□□ -0.58
GABRA6-201ENST00000274545 SNAPC4Q5SXM2 1469 aa11.43□□□□□ -0.58
GABRA6-201ENST00000274545 LRRC9Q6ZRR7 1453 aa11.43□□□□□ -0.58
GABRA6-201ENST00000274545 FYCO1Q9BQS8 1478 aa11.43□□□□□ -0.58
GABRA6-201ENST00000274545 SAMD9Q5K651 1589 aa11.42□□□□□ -0.58
GABRA6-201ENST00000274545 RRBP1Q9P2E9 1410 aaKnown RBP11.41□□□□□ -0.58
GABRA6-201ENST00000274545 CHMP7Q8WUX9 453 aaPredicted RBP11.41□□□□□ -0.58
GABRA6-201ENST00000274545 FBLN2P98095 1184 aa11.41□□□□□ -0.58
GABRA6-201ENST00000274545 CCNB3Q8WWL7 1395 aa11.41□□□□□ -0.58
GABRA6-201ENST00000274545 IQGAP2Q13576 1575 aa11.4□□□□□ -0.58
GABRA6-201ENST00000274545 GRIN2AQ12879 1464 aa11.38□□□□□ -0.59
GABRA6-201ENST00000274545 MAGI1Q96QZ7 1491 aaPredicted RBP11.38□□□□□ -0.59
GABRA6-201ENST00000274545 ITGAEP38570 1179 aa11.37□□□□□ -0.59
GABRA6-201ENST00000274545 KIAA0586Q9BVV6 1533 aa11.37□□□□□ -0.59
GABRA6-201ENST00000274545 CFAP43Q8NDM7 1665 aa11.36□□□□□ -0.59
GABRA6-201ENST00000274545 PHLDB1Q86UU1 1377 aa11.36□□□□□ -0.59
GABRA6-201ENST00000274545 SYNJ2O15056 1496 aa11.36□□□□□ -0.59
GABRA6-201ENST00000274545 MTUS2Q5JR59 1369 aa11.34□□□□□ -0.59
GABRA6-201ENST00000274545 UGGT2Q9NYU1 1516 aa11.34□□□□□ -0.59
GABRA6-201ENST00000274545 PRKCSHP14314 528 aaPredicted RBP11.33□□□□□ -0.6
GABRA6-201ENST00000274545 FAM50AQ14320 339 aaKnown RBP11.33□□□□□ -0.6
GABRA6-201ENST00000274545 DISP1Q96F81 1524 aa11.3□□□□□ -0.6
GABRA6-201ENST00000274545 CEP170Q5SW79 1584 aa11.29□□□□□ -0.6
GABRA6-201ENST00000274545 ARID3CA6NKF2 412 aa11.29□□□□□ -0.6
GABRA6-201ENST00000274545 JPH4Q96JJ6 628 aa11.29□□□□□ -0.6
GABRA6-201ENST00000274545 LRRIQ1Q96JM4 1722 aa11.29□□□□□ -0.6
GABRA6-201ENST00000274545 CCDC18Q5T9S5 1454 aa11.28□□□□□ -0.6
GABRA6-201ENST00000274545 NUP160Q12769 1436 aa11.27□□□□□ -0.6
GABRA6-201ENST00000274545 KIAA0556O60303 1618 aa11.27□□□□□ -0.61
GABRA6-201ENST00000274545 EPRSP07814 1512 aaKnown RBP11.27□□□□□ -0.61
GABRA6-201ENST00000274545 HECW1Q76N89 1606 aa11.26□□□□□ -0.61
GABRA6-201ENST00000274545 NCOA2Q15596 1464 aa11.25□□□□□ -0.61
GABRA6-201ENST00000274545 FGD6Q6ZV73 1430 aa11.25□□□□□ -0.61
GABRA6-201ENST00000274545 CARMIL2Q6F5E8 1435 aa11.24□□□□□ -0.61
GABRA6-201ENST00000274545 DHX57Q6P158 1386 aaKnown RBP11.24□□□□□ -0.61
GABRA6-201ENST00000274545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.24□□□□□ -0.61
GABRA6-201ENST00000274545 EHBP1L1Q8N3D4 1523 aa11.24□□□□□ -0.61
GABRA6-201ENST00000274545 CDK13Q14004 1512 aaKnown RBP11.23□□□□□ -0.61
GABRA6-201ENST00000274545 MAGI3Q5TCQ9 1506 aa11.23□□□□□ -0.61
GABRA6-201ENST00000274545 RAB3GAP2Q9H2M9 1393 aa11.23□□□□□ -0.61
GABRA6-201ENST00000274545 CLSPNQ9HAW4 1339 aa11.22□□□□□ -0.61
GABRA6-201ENST00000274545 MYOM3Q5VTT5 1437 aa11.22□□□□□ -0.61
GABRA6-201ENST00000274545 SUPT6HQ7KZ85 1726 aaKnown RBP11.22□□□□□ -0.61
GABRA6-201ENST00000274545 SETD5Q9C0A6 1442 aa11.21□□□□□ -0.62
GABRA6-201ENST00000274545 SLC24A1O60721 1099 aa11.21□□□□□ -0.62
GABRA6-201ENST00000274545 NUP153P49790 1475 aaKnown RBP11.2□□□□□ -0.62
GABRA6-201ENST00000274545 CDK11AQ9UQ88 783 aaPredicted RBP11.2□□□□□ -0.62
GABRA6-201ENST00000274545 PLB1Q6P1J6 1458 aa11.19□□□□□ -0.62
GABRA6-201ENST00000274545 RAPGEF6Q8TEU7 1601 aa11.19□□□□□ -0.62
GABRA6-201ENST00000274545 FOXD1Q16676 465 aa11.18□□□□□ -0.62
GABRA6-201ENST00000274545 ARHGEF11O15085 1522 aa11.18□□□□□ -0.62
GABRA6-201ENST00000274545 ERICH6Q7L0X2 663 aa11.18□□□□□ -0.62
GABRA6-201ENST00000274545 PRG4Q92954 1404 aaPredicted RBP11.16□□□□□ -0.62
GABRA6-201ENST00000274545 PTPRKQ15262 1439 aa11.15□□□□□ -0.62
GABRA6-201ENST00000274545 PTPN23Q9H3S7 1636 aa11.14□□□□□ -0.63
GABRA6-201ENST00000274545 CHD1O14646 1710 aa11.14□□□□□ -0.63
GABRA6-201ENST00000274545 MIA2Q96PC5 1412 aa11.13□□□□□ -0.63
GABRA6-201ENST00000274545 PTPRGP23470 1445 aa11.12□□□□□ -0.63
GABRA6-201ENST00000274545 ZNF316A6NFI3 1004 aaPredicted RBP11.11□□□□□ -0.63
GABRA6-201ENST00000274545 CHIC2Q9UKJ5 165 aa11.11□□□□□ -0.63
GABRA6-201ENST00000274545 HFM1A2PYH4 1435 aa11.11□□□□□ -0.63
GABRA6-201ENST00000274545 TROQ12816 1431 aaPredicted RBP11.11□□□□□ -0.63
GABRA6-201ENST00000274545 PLEKHD1A6NEE1 506 aa11.11□□□□□ -0.63
GABRA6-201ENST00000274545 TCOF1Q13428 1488 aaKnown RBP11.1□□□□□ -0.63
GABRA6-201ENST00000274545 ABCA8O94911 1581 aa11.09□□□□□ -0.63
GABRA6-201ENST00000274545 RRP7BPQ9NSQ0 103 aa11.09□□□□□ -0.63
GABRA6-201ENST00000274545 ZNF644Q9H582 1327 aaPredicted RBP11.09□□□□□ -0.63
GABRA6-201ENST00000274545 ATP10BO94823 1461 aa11.08□□□□□ -0.64
GABRA6-201ENST00000274545 DIEXFQ68CQ4 756 aaKnown RBP11.08□□□□□ -0.64
GABRA6-201ENST00000274545 CFDP1Q9UEE9 299 aaPredicted RBP11.08□□□□□ -0.64
GABRA6-201ENST00000274545 MAPKBP1O60336 1514 aa11.08□□□□□ -0.64
GABRA6-201ENST00000274545 NAIPQ13075 1403 aa11.08□□□□□ -0.64
GABRA6-201ENST00000274545 NEUROD1Q13562 356 aa11.06□□□□□ -0.64
GABRA6-201ENST00000274545 SIN3AQ96ST3 1273 aa11.05□□□□□ -0.64
GABRA6-201ENST00000274545 ZNF777Q9ULD5 760 aaPredicted RBP11.05□□□□□ -0.64
GABRA6-201ENST00000274545 SHROOM2Q13796 1616 aa11.05□□□□□ -0.64
GABRA6-201ENST00000274545 UACAQ9BZF9 1416 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms