RNA–Protein interactions for RNA: ENST00000272430.9

RTKN-202, Transcript of rhotekin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTKN, Length 2,142 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-202ENST00000272430 GAPVD1Q14C86 1478 aa23.11■■□□□ 1.29
RTKN-202ENST00000272430 MRC2Q9UBG0 1479 aa23.05■■□□□ 1.28
RTKN-202ENST00000272430 TIAM1Q13009 1591 aa23.05■■□□□ 1.28
RTKN-202ENST00000272430 PCF11O94913 1555 aaKnown RBP23.03■■□□□ 1.28
RTKN-202ENST00000272430 EFCAB5A4FU69 1503 aa23.02■■□□□ 1.28
RTKN-202ENST00000272430 MAP3K1Q13233 1512 aa23.02■■□□□ 1.28
RTKN-202ENST00000272430 PBRM1Q86U86 1689 aa23.01■■□□□ 1.27
RTKN-202ENST00000272430 FHOD3Q2V2M9 1422 aa23■■□□□ 1.27
RTKN-202ENST00000272430 RRBP1Q9P2E9 1410 aaKnown RBP23■■□□□ 1.27
RTKN-202ENST00000272430 P3H3Q8IVL6 736 aa22.99■■□□□ 1.27
RTKN-202ENST00000272430 CFAP43Q8NDM7 1665 aa22.98■■□□□ 1.27
RTKN-202ENST00000272430 FHAD1B1AJZ9 1412 aa22.97■■□□□ 1.27
RTKN-202ENST00000272430 WDR62O43379 1518 aa22.92■■□□□ 1.26
RTKN-202ENST00000272430 SAMD9Q5K651 1589 aa22.92■■□□□ 1.26
RTKN-202ENST00000272430 LRRC9Q6ZRR7 1453 aa22.92■■□□□ 1.26
RTKN-202ENST00000272430 AQRO60306 1485 aaKnown RBP eCLIP22.91■■□□□ 1.261e-6■■■■□ 20.2
RTKN-202ENST00000272430 FYCO1Q9BQS8 1478 aa22.89■■□□□ 1.25
RTKN-202ENST00000272430 ADAMTS12P58397 1594 aa22.88■■□□□ 1.25
RTKN-202ENST00000272430 CCNB3Q8WWL7 1395 aa22.87■■□□□ 1.25
RTKN-202ENST00000272430 CASKIN1Q8WXD9 1431 aa22.86■■□□□ 1.25
RTKN-202ENST00000272430 SNAPC4Q5SXM2 1469 aa22.84■■□□□ 1.25
RTKN-202ENST00000272430 ZNF608Q9ULD9 1512 aaPredicted RBP22.84■■□□□ 1.25
RTKN-202ENST00000272430 IFT140Q96RY7 1462 aa22.83■■□□□ 1.24
RTKN-202ENST00000272430 LRRIQ1Q96JM4 1722 aa22.82■■□□□ 1.24
RTKN-202ENST00000272430 GRIN2BQ13224 1484 aa22.8■■□□□ 1.24
RTKN-202ENST00000272430 PHLDB1Q86UU1 1377 aa22.8■■□□□ 1.24
RTKN-202ENST00000272430 FMN1Q68DA7 1419 aa22.8■■□□□ 1.24
RTKN-202ENST00000272430 THOC2Q8NI27 1593 aaKnown RBP22.79■■□□□ 1.24
RTKN-202ENST00000272430 ATP1B4Q9UN42 357 aaPredicted RBP22.77■■□□□ 1.24
RTKN-202ENST00000272430 ACIN1Q9UKV3 1341 aaKnown RBP22.75■■□□□ 1.23
RTKN-202ENST00000272430 ERCC6Q03468 1493 aa22.74■■□□□ 1.23
RTKN-202ENST00000272430 EIF4G3O43432 1585 aaKnown RBP22.74■■□□□ 1.23
RTKN-202ENST00000272430 IQGAP2Q13576 1575 aa22.73■■□□□ 1.23
RTKN-202ENST00000272430 DHX57Q6P158 1386 aaKnown RBP22.72■■□□□ 1.23
RTKN-202ENST00000272430 ITGAEP38570 1179 aa22.67■■□□□ 1.22
RTKN-202ENST00000272430 UGGT2Q9NYU1 1516 aa22.6■■□□□ 1.21
RTKN-202ENST00000272430 CLSPNQ9HAW4 1339 aa22.59■■□□□ 1.21
RTKN-202ENST00000272430 GRIN2AQ12879 1464 aa22.59■■□□□ 1.21
RTKN-202ENST00000272430 RAB3GAP2Q9H2M9 1393 aa22.57■■□□□ 1.2
RTKN-202ENST00000272430 MAGI3Q5TCQ9 1506 aa22.57■■□□□ 1.2
RTKN-202ENST00000272430 MTUS2Q5JR59 1369 aa22.57■■□□□ 1.2
RTKN-202ENST00000272430 FAM50AQ14320 339 aaKnown RBP22.57■■□□□ 1.2
RTKN-202ENST00000272430 KIAA0586Q9BVV6 1533 aa22.55■■□□□ 1.2
RTKN-202ENST00000272430 CENPBP07199 599 aaPredicted RBP22.55■■□□□ 1.2
RTKN-202ENST00000272430 NEUROD1Q13562 356 aa22.55■■□□□ 1.2
RTKN-202ENST00000272430 HECW1Q76N89 1606 aa22.55■■□□□ 1.2
RTKN-202ENST00000272430 FGD6Q6ZV73 1430 aa22.54■■□□□ 1.2
RTKN-202ENST00000272430 EHBP1L1Q8N3D4 1523 aa22.54■■□□□ 1.2
RTKN-202ENST00000272430 MAGI1Q96QZ7 1491 aaPredicted RBP22.53■■□□□ 1.2
RTKN-202ENST00000272430 SUPT6HQ7KZ85 1726 aaKnown RBP22.53■■□□□ 1.2
RTKN-202ENST00000272430 NCOA2Q15596 1464 aa22.52■■□□□ 1.2
RTKN-202ENST00000272430 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.52■■□□□ 1.2
RTKN-202ENST00000272430 DISP1Q96F81 1524 aa22.52■■□□□ 1.2
RTKN-202ENST00000272430 KIAA0556O60303 1618 aa22.52■■□□□ 1.2
RTKN-202ENST00000272430 SETD5Q9C0A6 1442 aa22.52■■□□□ 1.19
RTKN-202ENST00000272430 CCDC18Q5T9S5 1454 aa22.51■■□□□ 1.19
RTKN-202ENST00000272430 ZNF316A6NFI3 1004 aaPredicted RBP22.51■■□□□ 1.19
RTKN-202ENST00000272430 DIEXFQ68CQ4 756 aaKnown RBP22.49■■□□□ 1.19
RTKN-202ENST00000272430 CEP170Q5SW79 1584 aa22.49■■□□□ 1.19
RTKN-202ENST00000272430 ARHGEF11O15085 1522 aa22.48■■□□□ 1.19
RTKN-202ENST00000272430 EPRSP07814 1512 aaKnown RBP22.48■■□□□ 1.19
RTKN-202ENST00000272430 MAPKBP1O60336 1514 aa22.48■■□□□ 1.19
RTKN-202ENST00000272430 CDK13Q14004 1512 aaKnown RBP22.47■■□□□ 1.19
RTKN-202ENST00000272430 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
RTKN-202ENST00000272430 MYOM3Q5VTT5 1437 aa22.46■■□□□ 1.19
RTKN-202ENST00000272430 GTF3C3Q9Y5Q9 886 aa22.44■■□□□ 1.18
RTKN-202ENST00000272430 PTPRKQ15262 1439 aa22.41■■□□□ 1.18
RTKN-202ENST00000272430 PTPN23Q9H3S7 1636 aa22.39■■□□□ 1.18
RTKN-202ENST00000272430 CHMP7Q8WUX9 453 aaPredicted RBP22.37■■□□□ 1.17
RTKN-202ENST00000272430 RAPGEF6Q8TEU7 1601 aa22.37■■□□□ 1.17
RTKN-202ENST00000272430 NUP160Q12769 1436 aa22.36■■□□□ 1.17
RTKN-202ENST00000272430 NUP153P49790 1475 aaKnown RBP22.35■■□□□ 1.17
RTKN-202ENST00000272430 ARID3CA6NKF2 412 aa22.34■■□□□ 1.17
RTKN-202ENST00000272430 FBLN2P98095 1184 aa22.32■■□□□ 1.16
RTKN-202ENST00000272430 TCOF1Q13428 1488 aaKnown RBP22.31■■□□□ 1.16
RTKN-202ENST00000272430 HFM1A2PYH4 1435 aa22.3■■□□□ 1.16
RTKN-202ENST00000272430 NAIPQ13075 1403 aa22.25■■□□□ 1.15
RTKN-202ENST00000272430 PLB1Q6P1J6 1458 aa22.24■■□□□ 1.15
RTKN-202ENST00000272430 MIA2Q96PC5 1412 aa22.22■■□□□ 1.15
RTKN-202ENST00000272430 JPH4Q96JJ6 628 aa22.22■■□□□ 1.15
RTKN-202ENST00000272430 GCC2Q8IWJ2 1684 aa22.2■■□□□ 1.14
RTKN-202ENST00000272430 SIN3AQ96ST3 1273 aa22.2■■□□□ 1.14
RTKN-202ENST00000272430 CARMIL2Q6F5E8 1435 aa22.19■■□□□ 1.14
RTKN-202ENST00000272430 CHD1O14646 1710 aa22.17■■□□□ 1.14
RTKN-202ENST00000272430 UACAQ9BZF9 1416 aa22.16■■□□□ 1.14
RTKN-202ENST00000272430 PRG4Q92954 1404 aaPredicted RBP22.14■■□□□ 1.14
RTKN-202ENST00000272430 ABCA8O94911 1581 aa22.14■■□□□ 1.13
RTKN-202ENST00000272430 KDM6BO15054 1643 aa22.14■■□□□ 1.13
RTKN-202ENST00000272430 KIF14Q15058 1648 aa22.13■■□□□ 1.13
RTKN-202ENST00000272430 TROQ12816 1431 aaPredicted RBP22.13■■□□□ 1.13
RTKN-202ENST00000272430 ADCY10Q96PN6 1610 aa22.13■■□□□ 1.13
RTKN-202ENST00000272430 AKNAQ7Z591 1439 aa22.11■■□□□ 1.13
RTKN-202ENST00000272430 MIER1Q8N108 512 aa22.11■■□□□ 1.13
RTKN-202ENST00000272430 CHIC2Q9UKJ5 165 aa22.11■■□□□ 1.13
RTKN-202ENST00000272430 RRP7BPQ9NSQ0 103 aa22.1■■□□□ 1.13
RTKN-202ENST00000272430 DNMT1P26358 1616 aaKnown RBP22.1■■□□□ 1.13
RTKN-202ENST00000272430 CDK11AQ9UQ88 783 aaPredicted RBP22.08■■□□□ 1.13
RTKN-202ENST00000272430 ZNF644Q9H582 1327 aaPredicted RBP22.07■■□□□ 1.12
RTKN-202ENST00000272430 DAPK1P53355 1430 aa22.06■■□□□ 1.12
RTKN-202ENST00000272430 ITSN2Q9NZM3 1697 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms