RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 VPS8Q8N3P4 1428 aa19.67■□□□□ 0.74
CAPN9-201ENST00000271971 MAGI1Q96QZ7 1491 aaPredicted RBP19.67■□□□□ 0.74
CAPN9-201ENST00000271971 GRIN2AQ12879 1464 aa19.62■□□□□ 0.73
CAPN9-201ENST00000271971 SYNJ2O15056 1496 aa19.61■□□□□ 0.73
CAPN9-201ENST00000271971 HRCP23327 699 aa19.58■□□□□ 0.72
CAPN9-201ENST00000271971 IQGAP2Q13576 1575 aa19.57■□□□□ 0.72
CAPN9-201ENST00000271971 P3H3Q8IVL6 736 aa19.57■□□□□ 0.72
CAPN9-201ENST00000271971 FBLN2P98095 1184 aa19.57■□□□□ 0.72
CAPN9-201ENST00000271971 EFCAB5A4FU69 1503 aa19.56■□□□□ 0.72
CAPN9-201ENST00000271971 TTBK1Q5TCY1 1321 aaPredicted RBP19.56■□□□□ 0.72
CAPN9-201ENST00000271971 CHMP7Q8WUX9 453 aaPredicted RBP19.56■□□□□ 0.72
CAPN9-201ENST00000271971 PCGF6Q9BYE7 350 aa19.56■□□□□ 0.72
CAPN9-201ENST00000271971 FHOD3Q2V2M9 1422 aa19.55■□□□□ 0.72
CAPN9-201ENST00000271971 SAMD9Q5K651 1589 aa19.54■□□□□ 0.72
CAPN9-201ENST00000271971 CEP170Q5SW79 1584 aa19.54■□□□□ 0.72
CAPN9-201ENST00000271971 CHD1O14646 1710 aa19.51■□□□□ 0.71
CAPN9-201ENST00000271971 TRIM26Q12899 539 aaPredicted RBP19.48■□□□□ 0.71
CAPN9-201ENST00000271971 KIAA0586Q9BVV6 1533 aa19.48■□□□□ 0.71
CAPN9-201ENST00000271971 PCF11O94913 1555 aaKnown RBP19.47■□□□□ 0.71
CAPN9-201ENST00000271971 NUP160Q12769 1436 aa19.45■□□□□ 0.7
CAPN9-201ENST00000271971 UGGT2Q9NYU1 1516 aa19.44■□□□□ 0.7
CAPN9-201ENST00000271971 APLP2Q06481 763 aa19.43■□□□□ 0.7
CAPN9-201ENST00000271971 KIAA0556O60303 1618 aa19.38■□□□□ 0.69
CAPN9-201ENST00000271971 DISP1Q96F81 1524 aa19.38■□□□□ 0.69
CAPN9-201ENST00000271971 FMN1Q68DA7 1419 aa19.37■□□□□ 0.69
CAPN9-201ENST00000271971 FYCO1Q9BQS8 1478 aa19.36■□□□□ 0.69
CAPN9-201ENST00000271971 TIAM1Q13009 1591 aa19.35■□□□□ 0.69
CAPN9-201ENST00000271971 ATP1B4Q9UN42 357 aaPredicted RBP19.35■□□□□ 0.69
CAPN9-201ENST00000271971 CASKIN1Q8WXD9 1431 aa19.34■□□□□ 0.69
CAPN9-201ENST00000271971 KANK4Q5T7N3 995 aaPredicted RBP19.34■□□□□ 0.69
CAPN9-201ENST00000271971 CFAP43Q8NDM7 1665 aa19.34■□□□□ 0.69
CAPN9-201ENST00000271971 LRRIQ1Q96JM4 1722 aa19.34■□□□□ 0.69
CAPN9-201ENST00000271971 JPH4Q96JJ6 628 aa19.29■□□□□ 0.68
CAPN9-201ENST00000271971 MAP3K1Q13233 1512 aa19.27■□□□□ 0.68
CAPN9-201ENST00000271971 LRRC9Q6ZRR7 1453 aa19.23■□□□□ 0.67
CAPN9-201ENST00000271971 HECW1Q76N89 1606 aa19.23■□□□□ 0.67
CAPN9-201ENST00000271971 CARMIL2Q6F5E8 1435 aa19.23■□□□□ 0.67
CAPN9-201ENST00000271971 SHROOM2Q13796 1616 aa19.22■□□□□ 0.67
CAPN9-201ENST00000271971 CLASP1Q7Z460 1538 aa19.21■□□□□ 0.67
CAPN9-201ENST00000271971 PRG4Q92954 1404 aaPredicted RBP19.21■□□□□ 0.67
CAPN9-201ENST00000271971 RAPGEF6Q8TEU7 1601 aa19.19■□□□□ 0.66
CAPN9-201ENST00000271971 ARID3CA6NKF2 412 aa19.17■□□□□ 0.66
CAPN9-201ENST00000271971 CDK13Q14004 1512 aaKnown RBP19.17■□□□□ 0.66
CAPN9-201ENST00000271971 ERCC6L2Q5T890 1561 aa19.17■□□□□ 0.66
CAPN9-201ENST00000271971 PLB1Q6P1J6 1458 aa19.16■□□□□ 0.66
CAPN9-201ENST00000271971 EPRSP07814 1512 aaKnown RBP19.15■□□□□ 0.66
CAPN9-201ENST00000271971 CCDC18Q5T9S5 1454 aa19.14■□□□□ 0.65
CAPN9-201ENST00000271971 NUP153P49790 1475 aaKnown RBP19.14■□□□□ 0.65
CAPN9-201ENST00000271971 MAGI3Q5TCQ9 1506 aa19.12■□□□□ 0.65
CAPN9-201ENST00000271971 MTUS2Q5JR59 1369 aa19.11■□□□□ 0.65
CAPN9-201ENST00000271971 PHLDB1Q86UU1 1377 aa19.09■□□□□ 0.65
CAPN9-201ENST00000271971 ABCA8O94911 1581 aa19.08■□□□□ 0.65
CAPN9-201ENST00000271971 EHBP1L1Q8N3D4 1523 aa19.08■□□□□ 0.64
CAPN9-201ENST00000271971 PTPRGP23470 1445 aa19.06■□□□□ 0.64
CAPN9-201ENST00000271971 RRBP1Q9P2E9 1410 aaKnown RBP19.06■□□□□ 0.64
CAPN9-201ENST00000271971 SUPT6HQ7KZ85 1726 aaKnown RBP19.05■□□□□ 0.64
CAPN9-201ENST00000271971 HNRNPUL2Q1KMD3 747 aaKnown RBP19.03■□□□□ 0.64
CAPN9-201ENST00000271971 NCOA2Q15596 1464 aa19.02■□□□□ 0.63
CAPN9-201ENST00000271971 CCNB3Q8WWL7 1395 aa19.02■□□□□ 0.63
CAPN9-201ENST00000271971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.01■□□□□ 0.63
CAPN9-201ENST00000271971 OSCARQ8IYS5 282 aa18.98■□□□□ 0.63
CAPN9-201ENST00000271971 ARHGEF11O15085 1522 aa18.96■□□□□ 0.63
CAPN9-201ENST00000271971 UACAQ9BZF9 1416 aa18.95■□□□□ 0.62
CAPN9-201ENST00000271971 ATP10BO94823 1461 aa18.95■□□□□ 0.62
CAPN9-201ENST00000271971 FGD6Q6ZV73 1430 aa18.93■□□□□ 0.62
CAPN9-201ENST00000271971 ABCC2Q92887 1545 aa18.92■□□□□ 0.62
CAPN9-201ENST00000271971 MYOM3Q5VTT5 1437 aa18.92■□□□□ 0.62
CAPN9-201ENST00000271971 KIF14Q15058 1648 aa18.92■□□□□ 0.62
CAPN9-201ENST00000271971 ITGAEP38570 1179 aa18.91■□□□□ 0.62
CAPN9-201ENST00000271971 FAM50AQ14320 339 aaKnown RBP18.91■□□□□ 0.62
CAPN9-201ENST00000271971 TROQ12816 1431 aaPredicted RBP18.91■□□□□ 0.62
CAPN9-201ENST00000271971 CDK11AQ9UQ88 783 aaPredicted RBP18.9■□□□□ 0.62
CAPN9-201ENST00000271971 ADCY10Q96PN6 1610 aa18.88■□□□□ 0.61
CAPN9-201ENST00000271971 PTPN23Q9H3S7 1636 aa18.86■□□□□ 0.61
CAPN9-201ENST00000271971 ZCCHC11Q5TAX3 1644 aaKnown RBP18.84■□□□□ 0.61
CAPN9-201ENST00000271971 PELP1Q8IZL8 1130 aaKnown RBP18.84■□□□□ 0.61
CAPN9-201ENST00000271971 UHRF1BP1LA0JNW5 1464 aa18.82■□□□□ 0.6
CAPN9-201ENST00000271971 PLEKHD1A6NEE1 506 aa18.82■□□□□ 0.6
CAPN9-201ENST00000271971 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.79■□□□□ 0.6
CAPN9-201ENST00000271971 ITSN2Q9NZM3 1697 aa18.79■□□□□ 0.6
CAPN9-201ENST00000271971 CDC42BPAQ5VT25 1732 aa18.78■□□□□ 0.6
CAPN9-201ENST00000271971 KDM5BQ9UGL1 1544 aa18.78■□□□□ 0.6
CAPN9-201ENST00000271971 TCOF1Q13428 1488 aaKnown RBP18.77■□□□□ 0.6
CAPN9-201ENST00000271971 CCER1Q8TC90 406 aaPredicted RBP18.77■□□□□ 0.6
CAPN9-201ENST00000271971 MIA2Q96PC5 1412 aa18.77■□□□□ 0.59
CAPN9-201ENST00000271971 ABCC10Q5T3U5 1492 aa18.76■□□□□ 0.59
CAPN9-201ENST00000271971 GPATCH8Q9UKJ3 1502 aaKnown RBP18.75■□□□□ 0.59
CAPN9-201ENST00000271971 PTPRKQ15262 1439 aa18.74■□□□□ 0.59
CAPN9-201ENST00000271971 TTC37Q6PGP7 1564 aa18.73■□□□□ 0.59
CAPN9-201ENST00000271971 ZNF644Q9H582 1327 aaPredicted RBP18.72■□□□□ 0.59
CAPN9-201ENST00000271971 CAMSAP2Q08AD1 1489 aa18.69■□□□□ 0.58
CAPN9-201ENST00000271971 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.69■□□□□ 0.58
CAPN9-201ENST00000271971 CFDP1Q9UEE9 299 aaPredicted RBP18.69■□□□□ 0.58
CAPN9-201ENST00000271971 CDC42BPBQ9Y5S2 1711 aa18.68■□□□□ 0.58
CAPN9-201ENST00000271971 PREX2Q70Z35 1606 aa18.68■□□□□ 0.58
CAPN9-201ENST00000271971 RIMBP3CA6NJZ7 1639 aa18.67■□□□□ 0.58
CAPN9-201ENST00000271971 RIMBP3BA6NNM3 1639 aa18.67■□□□□ 0.58
CAPN9-201ENST00000271971 RAB3GAP2Q9H2M9 1393 aa18.67■□□□□ 0.58
CAPN9-201ENST00000271971 RIMBP3Q9UFD9 1639 aa18.67■□□□□ 0.58
CAPN9-201ENST00000271971 KCNH8Q96L42 1107 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms