RNA–Protein interactions for RNA: ENST00000271324.5

CD53-201, Transcript of CD53 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD53, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-201ENST00000271324 ADAMTS12P58397 1594 aa11.49□□□□□ -0.57
CD53-201ENST00000271324 GRIN2AQ12879 1464 aa11.48□□□□□ -0.57
CD53-201ENST00000271324 BIVM-ERCC5R4GMW8 1640 aa11.47□□□□□ -0.57
CD53-201ENST00000271324 TOP2BQ02880 1626 aa11.45□□□□□ -0.58
CD53-201ENST00000271324 SHROOM2Q13796 1616 aa11.45□□□□□ -0.58
CD53-201ENST00000271324 KIF13AQ9H1H9 1805 aa11.44□□□□□ -0.58
CD53-201ENST00000271324 WRNQ14191 1432 aaPredicted RBP eCLIP11.44□□□□□ -0.58
CD53-201ENST00000271324 NUP160Q12769 1436 aa11.43□□□□□ -0.58
CD53-201ENST00000271324 DMRT2Q9Y5R5 561 aa11.41□□□□□ -0.58
CD53-201ENST00000271324 FHAD1B1AJZ9 1412 aa11.39□□□□□ -0.59
CD53-201ENST00000271324 ERICH3Q5RHP9 1530 aa11.38□□□□□ -0.59
CD53-201ENST00000271324 PRG4Q92954 1404 aaPredicted RBP11.36□□□□□ -0.59
CD53-201ENST00000271324 RUSC2Q8N2Y8 1516 aa11.33□□□□□ -0.6
CD53-201ENST00000271324 JPH4Q96JJ6 628 aa11.33□□□□□ -0.6
CD53-201ENST00000271324 MAPK8IP2Q13387 824 aaPredicted RBP11.3□□□□□ -0.6
CD53-201ENST00000271324 SCAF1Q9H7N4 1312 aaKnown RBP11.3□□□□□ -0.6
CD53-201ENST00000271324 TSPOAP1O95153 1857 aa11.3□□□□□ -0.6
CD53-201ENST00000271324 ADCY10Q96PN6 1610 aa11.3□□□□□ -0.6
CD53-201ENST00000271324 FAM69CQ0P6D2 419 aa11.27□□□□□ -0.61
CD53-201ENST00000271324 DIP2BQ9P265 1576 aa11.26□□□□□ -0.61
CD53-201ENST00000271324 ABCC10Q5T3U5 1492 aa11.26□□□□□ -0.61
CD53-201ENST00000271324 MAPKBP1O60336 1514 aa11.24□□□□□ -0.61
CD53-201ENST00000271324 NPM1P06748 294 aaKnown RBP eCLIP11.22□□□□□ -0.61
CD53-201ENST00000271324 IGF1RP08069 1367 aa11.22□□□□□ -0.61
CD53-201ENST00000271324 CUL7Q14999 1698 aa11.21□□□□□ -0.61
CD53-201ENST00000271324 KIAA0586Q9BVV6 1533 aa11.21□□□□□ -0.62
CD53-201ENST00000271324 TTBK1Q5TCY1 1321 aaPredicted RBP11.2□□□□□ -0.62
CD53-201ENST00000271324 KDM6BO15054 1643 aa11.2□□□□□ -0.62
CD53-201ENST00000271324 KDM4FA0A1W2PPD8 638 aa11.17□□□□□ -0.62
CD53-201ENST00000271324 KIF27Q86VH2 1401 aa11.17□□□□□ -0.62
CD53-201ENST00000271324 PPRC1Q5VV67 1664 aaKnown RBP11.16□□□□□ -0.62
CD53-201ENST00000271324 PTPRGP23470 1445 aa11.14□□□□□ -0.63
CD53-201ENST00000271324 CARMIL1Q5VZK9 1371 aa11.13□□□□□ -0.63
CD53-201ENST00000271324 RNF39Q9H2S5 420 aa11.12□□□□□ -0.63
CD53-201ENST00000271324 IQGAP2Q13576 1575 aa11.11□□□□□ -0.63
CD53-201ENST00000271324 ABCC2Q92887 1545 aa11.1□□□□□ -0.63
CD53-201ENST00000271324 TNIKQ9UKE5 1360 aa11.09□□□□□ -0.63
CD53-201ENST00000271324 ASXL2Q76L83 1435 aa11.09□□□□□ -0.63
CD53-201ENST00000271324 DISP1Q96F81 1524 aa11.09□□□□□ -0.63
CD53-201ENST00000271324 CARMIL2Q6F5E8 1435 aa11.08□□□□□ -0.64
CD53-201ENST00000271324 GLI2P10070 1586 aa11.07□□□□□ -0.64
CD53-201ENST00000271324 ZCCHC11Q5TAX3 1644 aaKnown RBP11.07□□□□□ -0.64
CD53-201ENST00000271324 COL17A1Q9UMD9 1497 aaPredicted RBP11.06□□□□□ -0.64
CD53-201ENST00000271324 MAP3K4Q9Y6R4 1608 aa11.05□□□□□ -0.64
CD53-201ENST00000271324 UHRF1BP1LA0JNW5 1464 aa11.05□□□□□ -0.64
CD53-201ENST00000271324 PLB1Q6P1J6 1458 aa11.05□□□□□ -0.64
CD53-201ENST00000271324 UACAQ9BZF9 1416 aa11.05□□□□□ -0.64
CD53-201ENST00000271324 EPRSP07814 1512 aaKnown RBP11.03□□□□□ -0.64
CD53-201ENST00000271324 ADGRL1O94910 1474 aa11.03□□□□□ -0.64
CD53-201ENST00000271324 KIAA0556O60303 1618 aa11.03□□□□□ -0.64
CD53-201ENST00000271324 UGGT2Q9NYU1 1516 aa11.02□□□□□ -0.65
CD53-201ENST00000271324 KDM5BQ9UGL1 1544 aa11.02□□□□□ -0.65
CD53-201ENST00000271324 CTTNBP2Q8WZ74 1663 aa11.01□□□□□ -0.65
CD53-201ENST00000271324 RAPGEF2Q9Y4G8 1499 aa11.01□□□□□ -0.65
CD53-201ENST00000271324 ILDR1Q86SU0 546 aaPredicted RBP10.99□□□□□ -0.65
CD53-201ENST00000271324 TEX14Q8IWB6 1497 aa10.95□□□□□ -0.66
CD53-201ENST00000271324 WDR7Q9Y4E6 1490 aa10.95□□□□□ -0.66
CD53-201ENST00000271324 HECW2Q9P2P5 1572 aa10.94□□□□□ -0.66
CD53-201ENST00000271324 KCNH8Q96L42 1107 aa10.94□□□□□ -0.66
CD53-201ENST00000271324 CFAP43Q8NDM7 1665 aa10.93□□□□□ -0.66
CD53-201ENST00000271324 ABCA8O94911 1581 aa10.93□□□□□ -0.66
CD53-201ENST00000271324 HOXD11P31277 338 aaPredicted RBP10.91□□□□□ -0.66
CD53-201ENST00000271324 KIF21BO75037 1637 aa10.91□□□□□ -0.66
CD53-201ENST00000271324 ARID3CA6NKF2 412 aa10.9□□□□□ -0.66
CD53-201ENST00000271324 CD109Q6YHK3 1445 aa10.9□□□□□ -0.66
CD53-201ENST00000271324 MAGI3Q5TCQ9 1506 aa10.88□□□□□ -0.67
CD53-201ENST00000271324 C1QBPQ07021 282 aaKnown RBP10.88□□□□□ -0.67
CD53-201ENST00000271324 P3H3Q8IVL6 736 aa10.88□□□□□ -0.67
CD53-201ENST00000271324 GOLGA3Q08378 1498 aa10.88□□□□□ -0.67
CD53-201ENST00000271324 PRXQ9BXM0 1461 aa10.86□□□□□ -0.67
CD53-201ENST00000271324 PPP4R3CPQ6ZMV5 832 aa10.85□□□□□ -0.67
CD53-201ENST00000271324 ATP10BO94823 1461 aa10.84□□□□□ -0.67
CD53-201ENST00000271324 DCAF8L1A6NGE4 600 aa10.83□□□□□ -0.68
CD53-201ENST00000271324 PLSCR2Q9NRY7 297 aa10.83□□□□□ -0.68
CD53-201ENST00000271324 ABCA9Q8IUA7 1624 aa10.82□□□□□ -0.68
CD53-201ENST00000271324 ARAP3Q8WWN8 1544 aa10.81□□□□□ -0.68
CD53-201ENST00000271324 SAMD9Q5K651 1589 aa10.8□□□□□ -0.68
CD53-201ENST00000271324 RAPGEF6Q8TEU7 1601 aa10.8□□□□□ -0.68
CD53-201ENST00000271324 RAPGEF3O95398 923 aa10.79□□□□□ -0.68
CD53-201ENST00000271324 ADAMTSL3P82987 1691 aa10.79□□□□□ -0.68
CD53-201ENST00000271324 FRMPD1Q5SYB0 1578 aa10.78□□□□□ -0.68
CD53-201ENST00000271324 RANGAP1P46060 587 aaPredicted RBP10.78□□□□□ -0.68
CD53-201ENST00000271324 BCORL1Q5H9F3 1711 aa10.76□□□□□ -0.69
CD53-201ENST00000271324 PTPRMP28827 1452 aa10.76□□□□□ -0.69
CD53-201ENST00000271324 CNKSR2Q8WXI2 1034 aa10.76□□□□□ -0.69
CD53-201ENST00000271324 MADDQ8WXG6 1647 aa10.76□□□□□ -0.69
CD53-201ENST00000271324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.75□□□□□ -0.69
CD53-201ENST00000271324 HNRNPUL2Q1KMD3 747 aaKnown RBP10.75□□□□□ -0.69
CD53-201ENST00000271324 RNF216Q9NWF9 866 aaPredicted RBP10.74□□□□□ -0.69
CD53-201ENST00000271324 RICTORQ6R327 1708 aa10.74□□□□□ -0.69
CD53-201ENST00000271324 NUP153P49790 1475 aaKnown RBP10.74□□□□□ -0.69
CD53-201ENST00000271324 RIMS1Q86UR5 1692 aaKnown RBP10.74□□□□□ -0.69
CD53-201ENST00000271324 CSRNP3Q8WYN3 585 aa10.74□□□□□ -0.69
CD53-201ENST00000271324 SIGLEC1Q9BZZ2 1709 aa10.73□□□□□ -0.69
CD53-201ENST00000271324 FHOD3Q2V2M9 1422 aa10.73□□□□□ -0.69
CD53-201ENST00000271324 NEO1Q92859 1461 aa10.72□□□□□ -0.69
CD53-201ENST00000271324 FAM9AQ8IZU1 332 aaPredicted RBP10.72□□□□□ -0.69
CD53-201ENST00000271324 ARID4BQ4LE39 1312 aaPredicted RBP10.71□□□□□ -0.7
CD53-201ENST00000271324 PHLDB1Q86UU1 1377 aa10.71□□□□□ -0.7
CD53-201ENST00000271324 TTC37Q6PGP7 1564 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms