RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 ERCC6L2Q5T890 1561 aa40.95■■■■■ 4.15
SSBP4-201ENST00000270061 JPH4Q96JJ6 628 aa40.86■■■■■ 4.13
SSBP4-201ENST00000270061 PRG4Q92954 1404 aaPredicted RBP40.81■■■■■ 4.12
SSBP4-201ENST00000270061 KIAA0586Q9BVV6 1533 aa40.81■■■■■ 4.12
SSBP4-201ENST00000270061 RAPGEF2Q9Y4G8 1499 aa40.68■■■■■ 4.1
SSBP4-201ENST00000270061 IQGAP2Q13576 1575 aa40.56■■■■■ 4.08
SSBP4-201ENST00000270061 TRHP20396 242 aaPredicted RBP40.55■■■■■ 4.08
SSBP4-201ENST00000270061 PRXQ9BXM0 1461 aa40.45■■■■■ 4.07
SSBP4-201ENST00000270061 CARMIL2Q6F5E8 1435 aa40.4■■■■■ 4.06
SSBP4-201ENST00000270061 CTTNBP2Q8WZ74 1663 aa40.4■■■■■ 4.06
SSBP4-201ENST00000270061 CSRNP3Q8WYN3 585 aa40.33■■■■■ 4.05
SSBP4-201ENST00000270061 EEA1Q15075 1411 aa40.33■■■■■ 4.05
SSBP4-201ENST00000270061 UGGT2Q9NYU1 1516 aa40.31■■■■■ 4.04
SSBP4-201ENST00000270061 PTPRGP23470 1445 aa40.28■■■■■ 4.04
SSBP4-201ENST00000270061 TNIKQ9UKE5 1360 aa40.27■■■■■ 4.04
SSBP4-201ENST00000270061 DISP1Q96F81 1524 aa40.27■■■■■ 4.04
SSBP4-201ENST00000270061 ADCY10Q96PN6 1610 aa40.26■■■■■ 4.04
SSBP4-201ENST00000270061 TTBK1Q5TCY1 1321 aaPredicted RBP40.22■■■■■ 4.03
SSBP4-201ENST00000270061 NPM1P06748 294 aaKnown RBP eCLIP40.19■■■■■ 4.02
SSBP4-201ENST00000270061 KIAA0556O60303 1618 aa40.18■■■■■ 4.02
SSBP4-201ENST00000270061 FAM9AQ8IZU1 332 aaPredicted RBP40.15■■■■■ 4.02
SSBP4-201ENST00000270061 GOLGA3Q08378 1498 aa40.07■■■■■ 4
SSBP4-201ENST00000270061 MAPKBP1O60336 1514 aa40.06■■■■■ 4
SSBP4-201ENST00000270061 KIF13AQ9H1H9 1805 aa40.03■■■■■ 4
SSBP4-201ENST00000270061 UACAQ9BZF9 1416 aa40■■■■□ 3.99
SSBP4-201ENST00000270061 UHRF1BP1LA0JNW5 1464 aa39.97■■■■□ 3.99
SSBP4-201ENST00000270061 ABCC2Q92887 1545 aa39.97■■■■□ 3.99
SSBP4-201ENST00000270061 KIF21BO75037 1637 aa39.96■■■■□ 3.99
SSBP4-201ENST00000270061 ABCC10Q5T3U5 1492 aa39.91■■■■□ 3.98
SSBP4-201ENST00000270061 DIP2BQ9P265 1576 aa39.86■■■■□ 3.97
SSBP4-201ENST00000270061 FAM69CQ0P6D2 419 aa39.84■■■■□ 3.97
SSBP4-201ENST00000270061 KDM5BQ9UGL1 1544 aa39.8■■■■□ 3.96
SSBP4-201ENST00000270061 SAMD9Q5K651 1589 aa39.8■■■■□ 3.96
SSBP4-201ENST00000270061 PLB1Q6P1J6 1458 aa39.79■■■■□ 3.96
SSBP4-201ENST00000270061 LOC105371045A0A1W2PR82 267 aa39.79■■■■□ 3.96
SSBP4-201ENST00000270061 P3H3Q8IVL6 736 aa39.77■■■■□ 3.96
SSBP4-201ENST00000270061 ZCCHC11Q5TAX3 1644 aaKnown RBP39.76■■■■□ 3.95
SSBP4-201ENST00000270061 ASXL2Q76L83 1435 aa39.75■■■■□ 3.95
SSBP4-201ENST00000270061 ABCA8O94911 1581 aa39.74■■■■□ 3.95
SSBP4-201ENST00000270061 RANGAP1P46060 587 aaPredicted RBP39.69■■■■□ 3.94
SSBP4-201ENST00000270061 EHMT2Q96KQ7 1210 aa39.67■■■■□ 3.94
SSBP4-201ENST00000270061 UBTFP17480 764 aaKnown RBP39.64■■■■□ 3.94
SSBP4-201ENST00000270061 TSPOAP1O95153 1857 aa39.63■■■■□ 3.93
SSBP4-201ENST00000270061 GLI2P10070 1586 aa39.56■■■■□ 3.92
SSBP4-201ENST00000270061 EFCAB5A4FU69 1503 aa39.56■■■■□ 3.92
SSBP4-201ENST00000270061 FHOD3Q2V2M9 1422 aa39.53■■■■□ 3.92
SSBP4-201ENST00000270061 EPRSP07814 1512 aaKnown RBP39.51■■■■□ 3.92
SSBP4-201ENST00000270061 RAPGEF6Q8TEU7 1601 aa39.5■■■■□ 3.91
SSBP4-201ENST00000270061 WDR7Q9Y4E6 1490 aa39.5■■■■□ 3.91
SSBP4-201ENST00000270061 ARID3CA6NKF2 412 aa39.41■■■■□ 3.9
SSBP4-201ENST00000270061 ATP10BO94823 1461 aa39.4■■■■□ 3.9
SSBP4-201ENST00000270061 MAP3K4Q9Y6R4 1608 aa39.4■■■■□ 3.9
SSBP4-201ENST00000270061 PPRC1Q5VV67 1664 aaKnown RBP39.38■■■■□ 3.89
SSBP4-201ENST00000270061 KDM6BO15054 1643 aa39.32■■■■□ 3.89
SSBP4-201ENST00000270061 NUP153P49790 1475 aaKnown RBP39.32■■■■□ 3.88
SSBP4-201ENST00000270061 KCNH8Q96L42 1107 aa39.31■■■■□ 3.88
SSBP4-201ENST00000270061 ARHGAP35Q9NRY4 1499 aa39.29■■■■□ 3.88
SSBP4-201ENST00000270061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.26■■■■□ 3.87
SSBP4-201ENST00000270061 HNRNPUL2Q1KMD3 747 aaKnown RBP39.26■■■■□ 3.87
SSBP4-201ENST00000270061 CFAP43Q8NDM7 1665 aa39.25■■■■□ 3.87
SSBP4-201ENST00000270061 TEX14Q8IWB6 1497 aa39.22■■■■□ 3.87
SSBP4-201ENST00000270061 FMN1Q68DA7 1419 aa39.2■■■■□ 3.87
SSBP4-201ENST00000270061 CD109Q6YHK3 1445 aa39.17■■■■□ 3.86
SSBP4-201ENST00000270061 MAGI3Q5TCQ9 1506 aa39.1■■■■□ 3.85
SSBP4-201ENST00000270061 ABCA9Q8IUA7 1624 aa39.07■■■■□ 3.85
SSBP4-201ENST00000270061 HECW1Q76N89 1606 aa39.07■■■■□ 3.84
SSBP4-201ENST00000270061 PLEKHD1A6NEE1 506 aa39.05■■■■□ 3.84
SSBP4-201ENST00000270061 ATP1B4Q9UN42 357 aaPredicted RBP39.03■■■■□ 3.84
SSBP4-201ENST00000270061 CDK13Q14004 1512 aaKnown RBP39.02■■■■□ 3.84
SSBP4-201ENST00000270061 COL17A1Q9UMD9 1497 aaPredicted RBP38.99■■■■□ 3.83
SSBP4-201ENST00000270061 CLIP1P30622 1438 aa38.96■■■■□ 3.83
SSBP4-201ENST00000270061 LRRIQ1Q96JM4 1722 aa38.88■■■■□ 3.81
SSBP4-201ENST00000270061 PCF11O94913 1555 aaKnown RBP38.86■■■■□ 3.81
SSBP4-201ENST00000270061 CASKIN1Q8WXD9 1431 aa38.84■■■■□ 3.81
SSBP4-201ENST00000270061 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.83■■■■□ 3.816e-7■■■□□ 16.8
SSBP4-201ENST00000270061 CDK11AQ9UQ88 783 aaPredicted RBP38.83■■■■□ 3.81
SSBP4-201ENST00000270061 PHLDB1Q86UU1 1377 aa38.79■■■■□ 3.8
SSBP4-201ENST00000270061 CEP162Q5TB80 1403 aa38.79■■■■□ 3.8
SSBP4-201ENST00000270061 TTC37Q6PGP7 1564 aa38.79■■■■□ 3.8
SSBP4-201ENST00000270061 ARAP3Q8WWN8 1544 aa38.78■■■■□ 3.8
SSBP4-201ENST00000270061 NEO1Q92859 1461 aa38.77■■■■□ 3.8
SSBP4-201ENST00000270061 AEBP2Q6ZN18 517 aaPredicted RBP38.75■■■■□ 3.79
SSBP4-201ENST00000270061 CCDC18Q5T9S5 1454 aa38.74■■■■□ 3.79
SSBP4-201ENST00000270061 FYCO1Q9BQS8 1478 aa38.74■■■■□ 3.79
SSBP4-201ENST00000270061 TROQ12816 1431 aaPredicted RBP38.69■■■■□ 3.78
SSBP4-201ENST00000270061 KIF14Q15058 1648 aa38.67■■■■□ 3.78
SSBP4-201ENST00000270061 CFAP74Q9C0B2 1584 aa38.67■■■■□ 3.78
SSBP4-201ENST00000270061 FANCAO15360 1455 aa38.65■■■■□ 3.78
SSBP4-201ENST00000270061 MYO5CQ9NQX4 1742 aa38.62■■■■□ 3.77
SSBP4-201ENST00000270061 PLCH2O75038 1416 aa38.58■■■■□ 3.77
SSBP4-201ENST00000270061 AKNAQ7Z591 1439 aa38.58■■■■□ 3.77
SSBP4-201ENST00000270061 RAPGEF3O95398 923 aa38.57■■■■□ 3.76
SSBP4-201ENST00000270061 KDM4FA0A1W2PPD8 638 aa38.52■■■■□ 3.76
SSBP4-201ENST00000270061 FRMPD1Q5SYB0 1578 aa38.51■■■■□ 3.76
SSBP4-201ENST00000270061 DENND4BO75064 1496 aaPredicted RBP38.5■■■■□ 3.75
SSBP4-201ENST00000270061 RICTORQ6R327 1708 aa38.49■■■■□ 3.75
SSBP4-201ENST00000270061 EFCAB2Q5VUJ9 269 aa38.44■■■■□ 3.74
SSBP4-201ENST00000270061 ADGRL1O94910 1474 aa38.43■■■■□ 3.74
SSBP4-201ENST00000270061 ARHGAP5Q13017 1502 aa38.42■■■■□ 3.74
SSBP4-201ENST00000270061 CDC42BPBQ9Y5S2 1711 aa38.4■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms