RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 MRS2Q9HD23 443 aa15.73■□□□□ 0.11
SRRM4-201ENST00000267260 TNNT3P45378 269 aaPredicted RBP15.73■□□□□ 0.11
SRRM4-201ENST00000267260 SCAF1Q9H7N4 1312 aaKnown RBP15.69■□□□□ 0.1
SRRM4-201ENST00000267260 CHMP4BQ9H444 224 aaKnown RBP15.68■□□□□ 0.1
SRRM4-201ENST00000267260 CCDC180Q9P1Z9 1646 aa15.68■□□□□ 0.1
SRRM4-201ENST00000267260 PLCB2Q00722 1185 aa15.68■□□□□ 0.1
SRRM4-201ENST00000267260 NOP58Q9Y2X3 529 aaKnown RBP15.67■□□□□ 0.1
SRRM4-201ENST00000267260 FTSJ3Q8IY81 847 aaKnown RBP15.66■□□□□ 0.1
SRRM4-201ENST00000267260 P3H3Q8IVL6 736 aa15.64■□□□□ 0.09
SRRM4-201ENST00000267260 IRX6P78412 446 aaPredicted RBP15.62■□□□□ 0.09
SRRM4-201ENST00000267260 TPRNQ4KMQ1 711 aa15.61■□□□□ 0.09
SRRM4-201ENST00000267260 TULP1O00294 542 aaPredicted RBP15.61■□□□□ 0.09
SRRM4-201ENST00000267260 CSRNP3Q8WYN3 585 aa15.61■□□□□ 0.09
SRRM4-201ENST00000267260 CFAP44Q96MT7 982 aa15.6■□□□□ 0.09
SRRM4-201ENST00000267260 NPM1P06748 294 aaKnown RBP eCLIP15.6■□□□□ 0.09
SRRM4-201ENST00000267260 CFAP53Q96M91 514 aa15.6■□□□□ 0.09
SRRM4-201ENST00000267260 HSP90AB1P08238 724 aaKnown RBP15.6■□□□□ 0.09
SRRM4-201ENST00000267260 CALRP27797 417 aaKnown RBP15.6■□□□□ 0.09
SRRM4-201ENST00000267260 PTMSP20962 102 aa15.59■□□□□ 0.09
SRRM4-201ENST00000267260 LAS1LQ9Y4W2 734 aaKnown RBP15.58■□□□□ 0.09
SRRM4-201ENST00000267260 CDCA8Q53HL2 280 aa15.58■□□□□ 0.09
SRRM4-201ENST00000267260 EIF4G2P78344 907 aaKnown RBP eCLIP15.58■□□□□ 0.08
SRRM4-201ENST00000267260 DRC7Q8IY82 874 aa15.58■□□□□ 0.08
SRRM4-201ENST00000267260 MS4A1P11836 297 aa15.57■□□□□ 0.08
SRRM4-201ENST00000267260 ARID3CA6NKF2 412 aa15.57■□□□□ 0.08
SRRM4-201ENST00000267260 KIAA2012Q0VF49 1180 aa15.57■□□□□ 0.08
SRRM4-201ENST00000267260 A0A0G2JS52 829 aa15.55■□□□□ 0.08
SRRM4-201ENST00000267260 USP35Q9P2H5 1018 aa15.55■□□□□ 0.08
SRRM4-201ENST00000267260 NOC3LQ8WTT2 800 aaKnown RBP15.55■□□□□ 0.08
SRRM4-201ENST00000267260 GOLGA6L1Q8N7Z2 621 aa15.54■□□□□ 0.08
SRRM4-201ENST00000267260 GOLGA6L4A6NEF3 574 aa15.54■□□□□ 0.08
SRRM4-201ENST00000267260 FGD1P98174 961 aa15.54■□□□□ 0.08
SRRM4-201ENST00000267260 TSPY4P0CV99 314 aa15.52■□□□□ 0.08
SRRM4-201ENST00000267260 TSPY10P0CW01 314 aa15.52■□□□□ 0.08
SRRM4-201ENST00000267260 SETQ01105 290 aaPredicted RBP15.52■□□□□ 0.08
SRRM4-201ENST00000267260 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.52■□□□□ 0.08
SRRM4-201ENST00000267260 DEKP35659 375 aaKnown RBP15.52■□□□□ 0.08
SRRM4-201ENST00000267260 PNNQ9H307 717 aaKnown RBP15.52■□□□□ 0.07
SRRM4-201ENST00000267260 MCCP23508 829 aa15.5■□□□□ 0.07
SRRM4-201ENST00000267260 HSCBQ8IWL3 235 aa15.5■□□□□ 0.07
SRRM4-201ENST00000267260 KDM2AQ9Y2K7 1162 aa15.5■□□□□ 0.07
SRRM4-201ENST00000267260 SCRIBQ14160 1630 aa15.48■□□□□ 0.07
SRRM4-201ENST00000267260 MTUS2Q5JR59 1369 aa15.48■□□□□ 0.07
SRRM4-201ENST00000267260 KCNJ4P48050 445 aa15.48■□□□□ 0.07
SRRM4-201ENST00000267260 ABCC9O60706 1549 aa15.48■□□□□ 0.07
SRRM4-201ENST00000267260 KNSTRNQ9Y448 316 aa15.47■□□□□ 0.07
SRRM4-201ENST00000267260 ARID4BQ4LE39 1312 aaPredicted RBP15.47■□□□□ 0.07
SRRM4-201ENST00000267260 C14orf37Q86TY3 774 aa15.46■□□□□ 0.06
SRRM4-201ENST00000267260 GOLGA2Q08379 1002 aa15.45■□□□□ 0.06
SRRM4-201ENST00000267260 PLPPR3Q6T4P5 718 aa15.45■□□□□ 0.06
SRRM4-201ENST00000267260 PABPN1Q86U42 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
SRRM4-201ENST00000267260 PPP4R2Q9NY27 417 aa15.44■□□□□ 0.06
SRRM4-201ENST00000267260 MAPK8IP3Q9UPT6 1336 aa15.43■□□□□ 0.06
SRRM4-201ENST00000267260 RSF1Q96T23 1441 aaPredicted RBP15.43■□□□□ 0.06
SRRM4-201ENST00000267260 OS9Q13438 667 aaPredicted RBP15.42■□□□□ 0.06
SRRM4-201ENST00000267260 MIER1Q8N108 512 aa15.42■□□□□ 0.06
SRRM4-201ENST00000267260 A0A0U1RQG5 324 aaPredicted RBP15.42■□□□□ 0.06
SRRM4-201ENST00000267260 PPP1R15AO75807 674 aaPredicted RBP15.41■□□□□ 0.06
SRRM4-201ENST00000267260 NUDCQ9Y266 331 aa15.4■□□□□ 0.06
SRRM4-201ENST00000267260 NPHP1O15259 732 aa15.4■□□□□ 0.06
SRRM4-201ENST00000267260 ZBTB7CA1YPR0 619 aa15.4■□□□□ 0.06
SRRM4-201ENST00000267260 CLSTN1O94985 981 aa15.4■□□□□ 0.06
SRRM4-201ENST00000267260 SYAP1Q96A49 352 aaPredicted RBP15.4■□□□□ 0.06
SRRM4-201ENST00000267260 NAP1L2Q9ULW6 460 aaPredicted RBP15.39■□□□□ 0.05
SRRM4-201ENST00000267260 HAP1P54257 671 aaPredicted RBP15.38■□□□□ 0.05
SRRM4-201ENST00000267260 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.38■□□□□ 0.05
SRRM4-201ENST00000267260 ARID3AQ99856 593 aa15.38■□□□□ 0.05
SRRM4-201ENST00000267260 HTATSF1O43719 755 aaKnown RBP15.38■□□□□ 0.05
SRRM4-201ENST00000267260 TPM4P67936 248 aa15.37■□□□□ 0.05
SRRM4-201ENST00000267260 CHIC2Q9UKJ5 165 aa15.37■□□□□ 0.05
SRRM4-201ENST00000267260 GNL2Q13823 731 aaKnown RBP15.37■□□□□ 0.05
SRRM4-201ENST00000267260 SUPT16HQ9Y5B9 1047 aaKnown RBP15.37■□□□□ 0.05
SRRM4-201ENST00000267260 NCBP3Q53F19 620 aaKnown RBP15.37■□□□□ 0.05
SRRM4-201ENST00000267260 GBP4Q96PP9 640 aa15.37■□□□□ 0.05
SRRM4-201ENST00000267260 HSP90AA2PQ14568 343 aaPredicted RBP15.36■□□□□ 0.05
SRRM4-201ENST00000267260 RGS3P49796 1198 aa15.35■□□□□ 0.05
SRRM4-201ENST00000267260 CCDC34Q96HJ3 373 aa15.35■□□□□ 0.05
SRRM4-201ENST00000267260 TAOK2Q9UL54 1235 aa15.33■□□□□ 0.05
SRRM4-201ENST00000267260 RSPH6AQ9H0K4 717 aa15.32■□□□□ 0.04
SRRM4-201ENST00000267260 CSPP1Q1MSJ5 1256 aa15.3■□□□□ 0.04
SRRM4-201ENST00000267260 KIAA1211Q6ZU35 1233 aa15.29■□□□□ 0.04
SRRM4-201ENST00000267260 PHF14O94880 888 aa15.29■□□□□ 0.04
SRRM4-201ENST00000267260 PRM3Q9NNZ6 103 aa15.27■□□□□ 0.03
SRRM4-201ENST00000267260 FRAT1Q92837 279 aaPredicted RBP15.26■□□□□ 0.03
SRRM4-201ENST00000267260 CLIP1P30622 1438 aa15.26■□□□□ 0.03
SRRM4-201ENST00000267260 GOLGA6L3A6NEY3 463 aa15.25■□□□□ 0.03
SRRM4-201ENST00000267260 GOLGA3Q08378 1498 aa15.23■□□□□ 0.03
SRRM4-201ENST00000267260 GPS2Q13227 327 aa15.22■□□□□ 0.03
SRRM4-201ENST00000267260 EEA1Q15075 1411 aa15.22■□□□□ 0.03
SRRM4-201ENST00000267260 CARD11Q9BXL7 1154 aa15.21■□□□□ 0.03
SRRM4-201ENST00000267260 SPRYD3Q8NCJ5 442 aa15.2■□□□□ 0.02
SRRM4-201ENST00000267260 HIRIP3Q9BW71 556 aaPredicted RBP15.2■□□□□ 0.02
SRRM4-201ENST00000267260 ZCCHC6Q5VYS8 1495 aaKnown RBP15.19■□□□□ 0.02
SRRM4-201ENST00000267260 IPO8O15397 1037 aaKnown RBP15.19■□□□□ 0.02
SRRM4-201ENST00000267260 GPATCH3Q96I76 525 aa15.18■□□□□ 0.02
SRRM4-201ENST00000267260 GZF1Q9H116 711 aaPredicted RBP15.18■□□□□ 0.02
SRRM4-201ENST00000267260 TPM3P06753 285 aa15.18■□□□□ 0.02
SRRM4-201ENST00000267260 VSIG10Q8N0Z9 540 aa15.17■□□□□ 0.02
SRRM4-201ENST00000267260 PLEKHG5O94827 1062 aa15.17■□□□□ 0.02
SRRM4-201ENST00000267260 CALD1Q05682 793 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms