RNA–Protein interactions for RNA: ENST00000266674.9

LGR5-201, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LGR5, Length 4,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-201ENST00000266674 CEP164Q9UPV0 1460 aa18.45■□□□□ 0.54
LGR5-201ENST00000266674 RRP7BPQ9NSQ0 103 aa18.45■□□□□ 0.54
LGR5-201ENST00000266674 KDM2AQ9Y2K7 1162 aa18.44■□□□□ 0.54
LGR5-201ENST00000266674 DDRGK1Q96HY6 314 aa18.44■□□□□ 0.54
LGR5-201ENST00000266674 SIN3AQ96ST3 1273 aa18.43■□□□□ 0.54
LGR5-201ENST00000266674 RB1CC1Q8TDY2 1594 aa18.4■□□□□ 0.54
LGR5-201ENST00000266674 RBM19Q9Y4C8 960 aaKnown RBP18.4■□□□□ 0.54
LGR5-201ENST00000266674 SLC24A1O60721 1099 aa18.39■□□□□ 0.53
LGR5-201ENST00000266674 NOP58Q9Y2X3 529 aaKnown RBP18.38■□□□□ 0.53
LGR5-201ENST00000266674 SENP3-EIF4A1A0A087X0R7 540 aa18.36■□□□□ 0.53
LGR5-201ENST00000266674 PPM1GO15355 546 aaPredicted RBP18.36■□□□□ 0.53
LGR5-201ENST00000266674 TSPY4P0CV99 314 aa18.35■□□□□ 0.53
LGR5-201ENST00000266674 TSPY10P0CW01 314 aa18.35■□□□□ 0.53
LGR5-201ENST00000266674 B4GALNT3Q6L9W6 998 aa18.34■□□□□ 0.53
LGR5-201ENST00000266674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.32■□□□□ 0.529e-7■□□□□ 10.3
LGR5-201ENST00000266674 CCER2I3L3R5 266 aa18.32■□□□□ 0.52
LGR5-201ENST00000266674 BECN1Q14457 450 aa18.32■□□□□ 0.52
LGR5-201ENST00000266674 CCNB3Q8WWL7 1395 aa18.31■□□□□ 0.52
LGR5-201ENST00000266674 CHGAP10645 457 aaKnown RBP18.3■□□□□ 0.52
LGR5-201ENST00000266674 TSHZ2Q9NRE2 1034 aa18.3■□□□□ 0.52
LGR5-201ENST00000266674 TIMELESSQ9UNS1 1208 aa18.29■□□□□ 0.52
LGR5-201ENST00000266674 LAS1LQ9Y4W2 734 aaKnown RBP18.29■□□□□ 0.52
LGR5-201ENST00000266674 SOGA1O94964 1423 aa18.28■□□□□ 0.52
LGR5-201ENST00000266674 RTN4Q9NQC3 1192 aaKnown RBP18.26■□□□□ 0.51
LGR5-201ENST00000266674 KIF27Q86VH2 1401 aa18.25■□□□□ 0.51
LGR5-201ENST00000266674 DEKP35659 375 aaKnown RBP18.25■□□□□ 0.51
LGR5-201ENST00000266674 ERICH6BQ5W0A0 696 aa18.22■□□□□ 0.51
LGR5-201ENST00000266674 VPS8Q8N3P4 1428 aa18.21■□□□□ 0.51
LGR5-201ENST00000266674 TRIM44Q96DX7 344 aaPredicted RBP18.2■□□□□ 0.5
LGR5-201ENST00000266674 CECR2Q9BXF3 1484 aa18.19■□□□□ 0.5
LGR5-201ENST00000266674 CARD11Q9BXL7 1154 aa18.18■□□□□ 0.5
LGR5-201ENST00000266674 RGL3Q3MIN7 710 aa18.15■□□□□ 0.5
LGR5-201ENST00000266674 RGS3P49796 1198 aa18.13■□□□□ 0.49
LGR5-201ENST00000266674 SETD5Q9C0A6 1442 aa18.12■□□□□ 0.49
LGR5-201ENST00000266674 BAZ1AQ9NRL2 1556 aaPredicted RBP18.12■□□□□ 0.49
LGR5-201ENST00000266674 KANK4Q5T7N3 995 aaPredicted RBP18.11■□□□□ 0.49
LGR5-201ENST00000266674 KNSTRNQ9Y448 316 aa18.11■□□□□ 0.49
LGR5-201ENST00000266674 GOLGA6L22H0YM25 854 aa18.1■□□□□ 0.49
LGR5-201ENST00000266674 MYH16Q9H6N6 1097 aa18.1■□□□□ 0.49
LGR5-201ENST00000266674 BAZ1BQ9UIG0 1483 aaKnown RBP18.08■□□□□ 0.49
LGR5-201ENST00000266674 NACADO15069 1562 aa18.08■□□□□ 0.49
LGR5-201ENST00000266674 FHAD1B1AJZ9 1412 aa18.07■□□□□ 0.48
LGR5-201ENST00000266674 STAG3Q9UJ98 1225 aa18.07■□□□□ 0.48
LGR5-201ENST00000266674 HSPA5P11021 654 aaKnown RBP18.07■□□□□ 0.48
LGR5-201ENST00000266674 CFDP1Q9UEE9 299 aaPredicted RBP18.07■□□□□ 0.48
LGR5-201ENST00000266674 CCDC88BA6NC98 1476 aa18.06■□□□□ 0.48
LGR5-201ENST00000266674 CDCA8Q53HL2 280 aa18.05■□□□□ 0.48
LGR5-201ENST00000266674 RAB3GAP2Q9H2M9 1393 aa18.05■□□□□ 0.48
LGR5-201ENST00000266674 NAP1L5Q96NT1 182 aaPredicted RBP18.03■□□□□ 0.48
LGR5-201ENST00000266674 ABCC8Q09428 1581 aa18.02■□□□□ 0.48
LGR5-201ENST00000266674 PLEKHD1A6NEE1 506 aa18.02■□□□□ 0.48
LGR5-201ENST00000266674 PPP1R15AO75807 674 aaPredicted RBP18.01■□□□□ 0.47
LGR5-201ENST00000266674 CHMP7Q8WUX9 453 aaPredicted RBP18■□□□□ 0.47
LGR5-201ENST00000266674 NCLP19338 710 aaKnown RBP17.99■□□□□ 0.47
LGR5-201ENST00000266674 CFAP53Q96M91 514 aa17.99■□□□□ 0.47
LGR5-201ENST00000266674 FTSJ3Q8IY81 847 aaKnown RBP17.99■□□□□ 0.47
LGR5-201ENST00000266674 NEUROD2Q15784 382 aa17.98■□□□□ 0.47
LGR5-201ENST00000266674 MROH2BQ7Z745 1585 aa17.98■□□□□ 0.47
LGR5-201ENST00000266674 CC2D1BQ5T0F9 858 aaKnown RBP17.98■□□□□ 0.47
LGR5-201ENST00000266674 FRAT1Q92837 279 aaPredicted RBP17.97■□□□□ 0.47
LGR5-201ENST00000266674 KCNH8Q96L42 1107 aa17.96■□□□□ 0.47
LGR5-201ENST00000266674 CARMIL1Q5VZK9 1371 aa17.95■□□□□ 0.46
LGR5-201ENST00000266674 ESF1Q9H501 851 aaKnown RBP17.94■□□□□ 0.46
LGR5-201ENST00000266674 TCERG1O14776 1098 aaKnown RBP17.93■□□□□ 0.46
LGR5-201ENST00000266674 IPO9Q96P70 1041 aaKnown RBP17.92■□□□□ 0.46
LGR5-201ENST00000266674 PTMAP06454 111 aaKnown RBP17.92■□□□□ 0.46
LGR5-201ENST00000266674 ARHGAP35Q9NRY4 1499 aa17.91■□□□□ 0.46
LGR5-201ENST00000266674 DHX57Q6P158 1386 aaKnown RBP17.91■□□□□ 0.46
LGR5-201ENST00000266674 DCAF11Q8TEB1 546 aa17.9■□□□□ 0.46
LGR5-201ENST00000266674 RCAN3Q9UKA8 241 aa17.9■□□□□ 0.46
LGR5-201ENST00000266674 L1TD1Q5T7N2 865 aaKnown RBP17.89■□□□□ 0.45
LGR5-201ENST00000266674 NPM1P06748 294 aaKnown RBP eCLIP17.88■□□□□ 0.45
LGR5-201ENST00000266674 CUX2O14529 1486 aa17.87■□□□□ 0.45
LGR5-201ENST00000266674 DNTTIP2Q5QJE6 756 aaKnown RBP17.87■□□□□ 0.45
LGR5-201ENST00000266674 NUDCQ9Y266 331 aa17.87■□□□□ 0.45
LGR5-201ENST00000266674 TNNT2P45379 298 aaPredicted RBP17.87■□□□□ 0.45
LGR5-201ENST00000266674 TMF1P82094 1093 aa17.86■□□□□ 0.45
LGR5-201ENST00000266674 FOXD1Q16676 465 aa17.85■□□□□ 0.45
LGR5-201ENST00000266674 HSP90AB1P08238 724 aaKnown RBP17.84■□□□□ 0.45
LGR5-201ENST00000266674 MS4A1P11836 297 aa17.84■□□□□ 0.45
LGR5-201ENST00000266674 CASC1Q6TDU7 716 aa17.84■□□□□ 0.45
LGR5-201ENST00000266674 MAPK8IP3Q9UPT6 1336 aa17.83■□□□□ 0.44
LGR5-201ENST00000266674 MPHOSPH9Q99550 1183 aa17.81■□□□□ 0.44
LGR5-201ENST00000266674 HSCBQ8IWL3 235 aa17.81■□□□□ 0.44
LGR5-201ENST00000266674 KTN1Q86UP2 1357 aaKnown RBP17.8■□□□□ 0.44
LGR5-201ENST00000266674 RALBP1Q15311 655 aa17.79■□□□□ 0.44
LGR5-201ENST00000266674 SENP3Q9H4L4 574 aaPredicted RBP17.79■□□□□ 0.44
LGR5-201ENST00000266674 FANCIQ9NVI1 1328 aa17.79■□□□□ 0.44
LGR5-201ENST00000266674 L3MBTL2Q969R5 705 aa17.78■□□□□ 0.44
LGR5-201ENST00000266674 PKD2Q13563 968 aa17.78■□□□□ 0.44
LGR5-201ENST00000266674 SPRYD3Q8NCJ5 442 aa17.77■□□□□ 0.44
LGR5-201ENST00000266674 CHMP4BQ9H444 224 aaKnown RBP17.77■□□□□ 0.44
LGR5-201ENST00000266674 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.77■□□□□ 0.44
LGR5-201ENST00000266674 FMN1Q68DA7 1419 aa17.75■□□□□ 0.43
LGR5-201ENST00000266674 SLKQ9H2G2 1235 aaPredicted RBP17.75■□□□□ 0.43
LGR5-201ENST00000266674 TPRNQ4KMQ1 711 aa17.74■□□□□ 0.43
LGR5-201ENST00000266674 RAPGEF2Q9Y4G8 1499 aa17.73■□□□□ 0.43
LGR5-201ENST00000266674 USP35Q9P2H5 1018 aa17.73■□□□□ 0.43
LGR5-201ENST00000266674 U2SURPO15042 1029 aaKnown RBP17.72■□□□□ 0.43
LGR5-201ENST00000266674 MSNP26038 577 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms