RNA–Protein interactions for RNA: ENST00000265807.7

SH2D4A-201, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SH2D4A, Length 3,352 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-201ENST00000265807 ERCC6Q03468 1493 aa17.49■□□□□ 0.39
SH2D4A-201ENST00000265807 FHOD3Q2V2M9 1422 aa17.43■□□□□ 0.38
SH2D4A-201ENST00000265807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.42■□□□□ 0.38
SH2D4A-201ENST00000265807 IFT140Q96RY7 1462 aa17.41■□□□□ 0.38
SH2D4A-201ENST00000265807 ADAMTS12P58397 1594 aa17.4■□□□□ 0.38
SH2D4A-201ENST00000265807 EIF4G3O43432 1585 aaKnown RBP17.4■□□□□ 0.38
SH2D4A-201ENST00000265807 PCF11O94913 1555 aaKnown RBP17.38■□□□□ 0.37
SH2D4A-201ENST00000265807 GRIN2BQ13224 1484 aa17.36■□□□□ 0.37
SH2D4A-201ENST00000265807 APLP2Q06481 763 aa17.36■□□□□ 0.37
SH2D4A-201ENST00000265807 FHAD1B1AJZ9 1412 aa17.34■□□□□ 0.37
SH2D4A-201ENST00000265807 SAMD9Q5K651 1589 aa17.33■□□□□ 0.37
SH2D4A-201ENST00000265807 LRRIQ1Q96JM4 1722 aa17.33■□□□□ 0.36
SH2D4A-201ENST00000265807 SNAPC4Q5SXM2 1469 aa17.32■□□□□ 0.36
SH2D4A-201ENST00000265807 HNRNPUL2Q1KMD3 747 aaKnown RBP17.32■□□□□ 0.36
SH2D4A-201ENST00000265807 TIAM1Q13009 1591 aa17.32■□□□□ 0.36
SH2D4A-201ENST00000265807 EFCAB5A4FU69 1503 aa17.3■□□□□ 0.36
SH2D4A-201ENST00000265807 ATP1B4Q9UN42 357 aaPredicted RBP17.25■□□□□ 0.35
SH2D4A-201ENST00000265807 CFAP43Q8NDM7 1665 aa17.25■□□□□ 0.35
SH2D4A-201ENST00000265807 IQGAP2Q13576 1575 aa17.24■□□□□ 0.35
SH2D4A-201ENST00000265807 LRRC9Q6ZRR7 1453 aa17.23■□□□□ 0.35
SH2D4A-201ENST00000265807 CASKIN1Q8WXD9 1431 aa17.22■□□□□ 0.35
SH2D4A-201ENST00000265807 GRIN2AQ12879 1464 aa17.22■□□□□ 0.35
SH2D4A-201ENST00000265807 MAP3K1Q13233 1512 aa17.21■□□□□ 0.35
SH2D4A-201ENST00000265807 FYCO1Q9BQS8 1478 aa17.2■□□□□ 0.34
SH2D4A-201ENST00000265807 CCER1Q8TC90 406 aaPredicted RBP17.2■□□□□ 0.34
SH2D4A-201ENST00000265807 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
SH2D4A-201ENST00000265807 PHLDB1Q86UU1 1377 aa17.19■□□□□ 0.34
SH2D4A-201ENST00000265807 RRBP1Q9P2E9 1410 aaKnown RBP17.19■□□□□ 0.34
SH2D4A-201ENST00000265807 DISP1Q96F81 1524 aa17.15■□□□□ 0.34
SH2D4A-201ENST00000265807 FMN1Q68DA7 1419 aa17.15■□□□□ 0.34
SH2D4A-201ENST00000265807 MAGI1Q96QZ7 1491 aaPredicted RBP17.15■□□□□ 0.34
SH2D4A-201ENST00000265807 FBLN2P98095 1184 aa17.14■□□□□ 0.33
SH2D4A-201ENST00000265807 UGGT2Q9NYU1 1516 aa17.13■□□□□ 0.33
SH2D4A-201ENST00000265807 SYNJ2O15056 1496 aa17.13■□□□□ 0.33
SH2D4A-201ENST00000265807 MAGI3Q5TCQ9 1506 aa17.13■□□□□ 0.33
SH2D4A-201ENST00000265807 KIAA0586Q9BVV6 1533 aa17.13■□□□□ 0.33
SH2D4A-201ENST00000265807 CCNB3Q8WWL7 1395 aa17.11■□□□□ 0.33
SH2D4A-201ENST00000265807 CHMP7Q8WUX9 453 aaPredicted RBP17.11■□□□□ 0.33
SH2D4A-201ENST00000265807 ZEB1P37275 1124 aaPredicted RBP17.1■□□□□ 0.33
SH2D4A-201ENST00000265807 ARID3CA6NKF2 412 aa17.09■□□□□ 0.33
SH2D4A-201ENST00000265807 KIAA0556O60303 1618 aa17.09■□□□□ 0.33
SH2D4A-201ENST00000265807 ITGAEP38570 1179 aa17.09■□□□□ 0.33
SH2D4A-201ENST00000265807 CDK13Q14004 1512 aaKnown RBP17.07■□□□□ 0.32
SH2D4A-201ENST00000265807 NUP160Q12769 1436 aa17.06■□□□□ 0.32
SH2D4A-201ENST00000265807 CHD1O14646 1710 aa17.02■□□□□ 0.32
SH2D4A-201ENST00000265807 EPRSP07814 1512 aaKnown RBP17.01■□□□□ 0.31
SH2D4A-201ENST00000265807 MTUS2Q5JR59 1369 aa16.99■□□□□ 0.31
SH2D4A-201ENST00000265807 HECW1Q76N89 1606 aa16.98■□□□□ 0.31
SH2D4A-201ENST00000265807 NCOA2Q15596 1464 aa16.98■□□□□ 0.31
SH2D4A-201ENST00000265807 FAM50AQ14320 339 aaKnown RBP16.98■□□□□ 0.31
SH2D4A-201ENST00000265807 JPH4Q96JJ6 628 aa16.98■□□□□ 0.31
SH2D4A-201ENST00000265807 NUP153P49790 1475 aaKnown RBP16.97■□□□□ 0.31
SH2D4A-201ENST00000265807 PLB1Q6P1J6 1458 aa16.97■□□□□ 0.31
SH2D4A-201ENST00000265807 DHX57Q6P158 1386 aaKnown RBP16.95■□□□□ 0.3
SH2D4A-201ENST00000265807 ARHGEF11O15085 1522 aa16.95■□□□□ 0.3
SH2D4A-201ENST00000265807 PTPRKQ15262 1439 aa16.94■□□□□ 0.3
SH2D4A-201ENST00000265807 FGD6Q6ZV73 1430 aa16.94■□□□□ 0.3
SH2D4A-201ENST00000265807 RAPGEF6Q8TEU7 1601 aa16.94■□□□□ 0.3
SH2D4A-201ENST00000265807 SUPT6HQ7KZ85 1726 aaKnown RBP16.93■□□□□ 0.3
SH2D4A-201ENST00000265807 EHBP1L1Q8N3D4 1523 aa16.93■□□□□ 0.3
SH2D4A-201ENST00000265807 CCDC18Q5T9S5 1454 aa16.92■□□□□ 0.3
SH2D4A-201ENST00000265807 RAB3GAP2Q9H2M9 1393 aa16.91■□□□□ 0.3
SH2D4A-201ENST00000265807 ERCC6L2Q5T890 1561 aa16.89■□□□□ 0.29
SH2D4A-201ENST00000265807 MYOM3Q5VTT5 1437 aa16.88■□□□□ 0.29
SH2D4A-201ENST00000265807 PTPN23Q9H3S7 1636 aa16.85■□□□□ 0.29
SH2D4A-201ENST00000265807 PRG4Q92954 1404 aaPredicted RBP16.85■□□□□ 0.29
SH2D4A-201ENST00000265807 ABCA8O94911 1581 aa16.82■□□□□ 0.28
SH2D4A-201ENST00000265807 SETD5Q9C0A6 1442 aa16.82■□□□□ 0.28
SH2D4A-201ENST00000265807 MAPKBP1O60336 1514 aa16.82■□□□□ 0.28
SH2D4A-201ENST00000265807 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.82■□□□□ 0.28
SH2D4A-201ENST00000265807 CARMIL2Q6F5E8 1435 aa16.81■□□□□ 0.28
SH2D4A-201ENST00000265807 SHROOM2Q13796 1616 aa16.81■□□□□ 0.28
SH2D4A-201ENST00000265807 KIF14Q15058 1648 aa16.81■□□□□ 0.28
SH2D4A-201ENST00000265807 ZNF644Q9H582 1327 aaPredicted RBP16.79■□□□□ 0.28
SH2D4A-201ENST00000265807 ATP10BO94823 1461 aa16.77■□□□□ 0.27
SH2D4A-201ENST00000265807 TCOF1Q13428 1488 aaKnown RBP16.77■□□□□ 0.27
SH2D4A-201ENST00000265807 KDM6BO15054 1643 aa16.75■□□□□ 0.27
SH2D4A-201ENST00000265807 CLASP1Q7Z460 1538 aa16.74■□□□□ 0.27
SH2D4A-201ENST00000265807 CHIC2Q9UKJ5 165 aa16.74■□□□□ 0.27
SH2D4A-201ENST00000265807 NAIPQ13075 1403 aa16.72■□□□□ 0.27
SH2D4A-201ENST00000265807 PTPRGP23470 1445 aa16.72■□□□□ 0.27
SH2D4A-201ENST00000265807 TROQ12816 1431 aaPredicted RBP16.72■□□□□ 0.27
SH2D4A-201ENST00000265807 HFM1A2PYH4 1435 aa16.7■□□□□ 0.26
SH2D4A-201ENST00000265807 RRP7BPQ9NSQ0 103 aa16.7■□□□□ 0.26
SH2D4A-201ENST00000265807 ADCY10Q96PN6 1610 aa16.7■□□□□ 0.26
SH2D4A-201ENST00000265807 SIN3AQ96ST3 1273 aa16.69■□□□□ 0.26
SH2D4A-201ENST00000265807 GPATCH8Q9UKJ3 1502 aaKnown RBP16.68■□□□□ 0.26
SH2D4A-201ENST00000265807 MIA2Q96PC5 1412 aa16.68■□□□□ 0.26
SH2D4A-201ENST00000265807 CDC42BPAQ5VT25 1732 aa16.67■□□□□ 0.26
SH2D4A-201ENST00000265807 CLSPNQ9HAW4 1339 aa16.66■□□□□ 0.26
SH2D4A-201ENST00000265807 ABCC10Q5T3U5 1492 aa16.65■□□□□ 0.26
SH2D4A-201ENST00000265807 ABCC5O15440 1437 aa16.65■□□□□ 0.26
SH2D4A-201ENST00000265807 DENND4BO75064 1496 aaPredicted RBP16.64■□□□□ 0.25
SH2D4A-201ENST00000265807 DNMT1P26358 1616 aaKnown RBP16.63■□□□□ 0.25
SH2D4A-201ENST00000265807 GCC2Q8IWJ2 1684 aa16.63■□□□□ 0.25
SH2D4A-201ENST00000265807 DAPK1P53355 1430 aa16.63■□□□□ 0.25
SH2D4A-201ENST00000265807 UACAQ9BZF9 1416 aa16.63■□□□□ 0.25
SH2D4A-201ENST00000265807 CDK11AQ9UQ88 783 aaPredicted RBP16.63■□□□□ 0.25
SH2D4A-201ENST00000265807 CAMSAP2Q08AD1 1489 aa16.62■□□□□ 0.25
SH2D4A-201ENST00000265807 PLEKHD1A6NEE1 506 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms