RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 PBRM1Q86U86 1689 aa25.72■■□□□ 1.71
CHKA-201ENST00000265689 P3H3Q8IVL6 736 aa25.71■■□□□ 1.71
CHKA-201ENST00000265689 IFT140Q96RY7 1462 aa25.69■■□□□ 1.7
CHKA-201ENST00000265689 EIF4G3O43432 1585 aaKnown RBP25.66■■□□□ 1.7
CHKA-201ENST00000265689 KANK4Q5T7N3 995 aaPredicted RBP25.66■■□□□ 1.7
CHKA-201ENST00000265689 CUL7Q14999 1698 aa25.66■■□□□ 1.7
CHKA-201ENST00000265689 HNRNPUL2Q1KMD3 747 aaKnown RBP25.62■■□□□ 1.69
CHKA-201ENST00000265689 GRIN2BQ13224 1484 aa25.56■■□□□ 1.68
CHKA-201ENST00000265689 SNAPC4Q5SXM2 1469 aa25.56■■□□□ 1.68
CHKA-201ENST00000265689 FBLN2P98095 1184 aa25.56■■□□□ 1.68
CHKA-201ENST00000265689 ADAMTS12P58397 1594 aa25.53■■□□□ 1.68
CHKA-201ENST00000265689 CTTNBP2Q8WZ74 1663 aa25.51■■□□□ 1.67
CHKA-201ENST00000265689 FHAD1B1AJZ9 1412 aa25.47■■□□□ 1.67
CHKA-201ENST00000265689 FHOD3Q2V2M9 1422 aa25.46■■□□□ 1.67
CHKA-201ENST00000265689 TIAM1Q13009 1591 aa25.41■■□□□ 1.66
CHKA-201ENST00000265689 ATP1B4Q9UN42 357 aaPredicted RBP25.41■■□□□ 1.66
CHKA-201ENST00000265689 EFCAB5A4FU69 1503 aa25.41■■□□□ 1.66
CHKA-201ENST00000265689 MAP3K1Q13233 1512 aa25.39■■□□□ 1.65
CHKA-201ENST00000265689 CHMP7Q8WUX9 453 aaPredicted RBP25.38■■□□□ 1.65
CHKA-201ENST00000265689 PCF11O94913 1555 aaKnown RBP25.38■■□□□ 1.65
CHKA-201ENST00000265689 RRBP1Q9P2E9 1410 aaKnown RBP25.37■■□□□ 1.65
CHKA-201ENST00000265689 GRIN2AQ12879 1464 aa25.33■■□□□ 1.65
CHKA-201ENST00000265689 LRRC9Q6ZRR7 1453 aa25.32■■□□□ 1.64
CHKA-201ENST00000265689 CCNB3Q8WWL7 1395 aa25.29■■□□□ 1.64
CHKA-201ENST00000265689 CASKIN1Q8WXD9 1431 aa25.28■■□□□ 1.64
CHKA-201ENST00000265689 MAGI1Q96QZ7 1491 aaPredicted RBP25.27■■□□□ 1.64
CHKA-201ENST00000265689 FYCO1Q9BQS8 1478 aa25.27■■□□□ 1.64
CHKA-201ENST00000265689 CFAP43Q8NDM7 1665 aa25.26■■□□□ 1.63
CHKA-201ENST00000265689 SYNJ2O15056 1496 aa25.26■■□□□ 1.63
CHKA-201ENST00000265689 IQGAP2Q13576 1575 aa25.26■■□□□ 1.63
CHKA-201ENST00000265689 CEP170Q5SW79 1584 aa25.26■■□□□ 1.63
CHKA-201ENST00000265689 SAMD9Q5K651 1589 aa25.25■■□□□ 1.63
CHKA-201ENST00000265689 ARID3CA6NKF2 412 aa25.25■■□□□ 1.63
CHKA-201ENST00000265689 FMN1Q68DA7 1419 aa25.24■■□□□ 1.63
CHKA-201ENST00000265689 PHLDB1Q86UU1 1377 aa25.2■■□□□ 1.62
CHKA-201ENST00000265689 ITGAEP38570 1179 aa25.18■■□□□ 1.62
CHKA-201ENST00000265689 CHD1O14646 1710 aa25.16■■□□□ 1.62
CHKA-201ENST00000265689 KIAA0586Q9BVV6 1533 aa25.13■■□□□ 1.61
CHKA-201ENST00000265689 LRRIQ1Q96JM4 1722 aa25.11■■□□□ 1.61
CHKA-201ENST00000265689 DISP1Q96F81 1524 aa25.09■■□□□ 1.61
CHKA-201ENST00000265689 DHX57Q6P158 1386 aaKnown RBP25.08■■□□□ 1.61
CHKA-201ENST00000265689 FAM50AQ14320 339 aaKnown RBP25.06■■□□□ 1.6
CHKA-201ENST00000265689 NUP160Q12769 1436 aa25.06■■□□□ 1.6
CHKA-201ENST00000265689 JPH4Q96JJ6 628 aa25.05■■□□□ 1.6
CHKA-201ENST00000265689 UGGT2Q9NYU1 1516 aa25.04■■□□□ 1.6
CHKA-201ENST00000265689 MTUS2Q5JR59 1369 aa25.02■■□□□ 1.6
CHKA-201ENST00000265689 KIAA0556O60303 1618 aa25.02■■□□□ 1.6
CHKA-201ENST00000265689 CLSPNQ9HAW4 1339 aa24.97■■□□□ 1.59
CHKA-201ENST00000265689 RAB3GAP2Q9H2M9 1393 aa24.95■■□□□ 1.58
CHKA-201ENST00000265689 CDK13Q14004 1512 aaKnown RBP24.94■■□□□ 1.58
CHKA-201ENST00000265689 FGD6Q6ZV73 1430 aa24.91■■□□□ 1.58
CHKA-201ENST00000265689 PLB1Q6P1J6 1458 aa24.9■■□□□ 1.58
CHKA-201ENST00000265689 SETD5Q9C0A6 1442 aa24.9■■□□□ 1.58
CHKA-201ENST00000265689 ERCC6L2Q5T890 1561 aa24.9■■□□□ 1.58
CHKA-201ENST00000265689 NCOA2Q15596 1464 aa24.89■■□□□ 1.58
CHKA-201ENST00000265689 HECW1Q76N89 1606 aa24.89■■□□□ 1.57
CHKA-201ENST00000265689 CCDC18Q5T9S5 1454 aa24.89■■□□□ 1.57
CHKA-201ENST00000265689 ZNF316A6NFI3 1004 aaPredicted RBP24.88■■□□□ 1.57
CHKA-201ENST00000265689 MAGI3Q5TCQ9 1506 aa24.88■■□□□ 1.57
CHKA-201ENST00000265689 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.88■■□□□ 1.57
CHKA-201ENST00000265689 EHBP1L1Q8N3D4 1523 aa24.88■■□□□ 1.57
CHKA-201ENST00000265689 PRG4Q92954 1404 aaPredicted RBP24.88■■□□□ 1.57
CHKA-201ENST00000265689 DIEXFQ68CQ4 756 aaKnown RBP24.86■■□□□ 1.57
CHKA-201ENST00000265689 EPRSP07814 1512 aaKnown RBP24.85■■□□□ 1.57
CHKA-201ENST00000265689 SUPT6HQ7KZ85 1726 aaKnown RBP24.84■■□□□ 1.57
CHKA-201ENST00000265689 MYOM3Q5VTT5 1437 aa24.82■■□□□ 1.56
CHKA-201ENST00000265689 NUP153P49790 1475 aaKnown RBP24.8■■□□□ 1.56
CHKA-201ENST00000265689 CARMIL2Q6F5E8 1435 aa24.79■■□□□ 1.56
CHKA-201ENST00000265689 RAPGEF6Q8TEU7 1601 aa24.78■■□□□ 1.56
CHKA-201ENST00000265689 ARHGEF11O15085 1522 aa24.78■■□□□ 1.56
CHKA-201ENST00000265689 PTPRKQ15262 1439 aa24.74■■□□□ 1.55
CHKA-201ENST00000265689 MAPKBP1O60336 1514 aa24.74■■□□□ 1.55
CHKA-201ENST00000265689 PTPN23Q9H3S7 1636 aa24.7■■□□□ 1.54
CHKA-201ENST00000265689 CLASP1Q7Z460 1538 aa24.69■■□□□ 1.54
CHKA-201ENST00000265689 SHROOM2Q13796 1616 aa24.68■■□□□ 1.54
CHKA-201ENST00000265689 PTPRGP23470 1445 aa24.67■■□□□ 1.54
CHKA-201ENST00000265689 HFM1A2PYH4 1435 aa24.62■■□□□ 1.53
CHKA-201ENST00000265689 TCOF1Q13428 1488 aaKnown RBP24.62■■□□□ 1.53
CHKA-201ENST00000265689 ABCA8O94911 1581 aa24.61■■□□□ 1.53
CHKA-201ENST00000265689 NAIPQ13075 1403 aa24.58■■□□□ 1.53
CHKA-201ENST00000265689 MIA2Q96PC5 1412 aa24.58■■□□□ 1.53
CHKA-201ENST00000265689 SIN3AQ96ST3 1273 aa24.58■■□□□ 1.52
CHKA-201ENST00000265689 CDK11AQ9UQ88 783 aaPredicted RBP24.57■■□□□ 1.52
CHKA-201ENST00000265689 ATP10BO94823 1461 aa24.56■■□□□ 1.52
CHKA-201ENST00000265689 KIF14Q15058 1648 aa24.55■■□□□ 1.52
CHKA-201ENST00000265689 CHIC2Q9UKJ5 165 aa24.55■■□□□ 1.52
CHKA-201ENST00000265689 NEUROD1Q13562 356 aa24.54■■□□□ 1.52
CHKA-201ENST00000265689 OSCARQ8IYS5 282 aa24.53■■□□□ 1.52
CHKA-201ENST00000265689 ZNF644Q9H582 1327 aaPredicted RBP24.53■■□□□ 1.52
CHKA-201ENST00000265689 RRP7BPQ9NSQ0 103 aa24.53■■□□□ 1.52
CHKA-201ENST00000265689 TROQ12816 1431 aaPredicted RBP24.49■■□□□ 1.51
CHKA-201ENST00000265689 UACAQ9BZF9 1416 aa24.49■■□□□ 1.51
CHKA-201ENST00000265689 ZNF777Q9ULD5 760 aaPredicted RBP24.44■■□□□ 1.5
CHKA-201ENST00000265689 PLEKHD1A6NEE1 506 aa24.43■■□□□ 1.5
CHKA-201ENST00000265689 MIER1Q8N108 512 aa24.42■■□□□ 1.5
CHKA-201ENST00000265689 KCNH8Q96L42 1107 aa24.41■■□□□ 1.5
CHKA-201ENST00000265689 AKNAQ7Z591 1439 aa24.4■■□□□ 1.5
CHKA-201ENST00000265689 GCC2Q8IWJ2 1684 aa24.4■■□□□ 1.5
CHKA-201ENST00000265689 DAPK1P53355 1430 aa24.39■■□□□ 1.5
CHKA-201ENST00000265689 ABCC5O15440 1437 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms