RNA–Protein interactions for RNA: ENST00000265598.7

LAMP3-201, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene LAMP3, Length 3,375 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-201ENST00000265598 MRC2Q9UBG0 1479 aa16.58■□□□□ 0.24
LAMP3-201ENST00000265598 ARID3CA6NKF2 412 aa16.57■□□□□ 0.24
LAMP3-201ENST00000265598 FAM50AQ14320 339 aaKnown RBP16.51■□□□□ 0.23
LAMP3-201ENST00000265598 ZNF608Q9ULD9 1512 aaPredicted RBP16.5■□□□□ 0.23
LAMP3-201ENST00000265598 CUL7Q14999 1698 aa16.47■□□□□ 0.23
LAMP3-201ENST00000265598 FHAD1B1AJZ9 1412 aa16.46■□□□□ 0.23
LAMP3-201ENST00000265598 CHMP7Q8WUX9 453 aaPredicted RBP16.45■□□□□ 0.22
LAMP3-201ENST00000265598 ABCA5Q8WWZ7 1642 aa16.45■□□□□ 0.22
LAMP3-201ENST00000265598 TARBP1Q13395 1621 aaKnown RBP16.44■□□□□ 0.22
LAMP3-201ENST00000265598 WDR97A6NE52 1622 aa16.43■□□□□ 0.22
LAMP3-201ENST00000265598 GRIN2BQ13224 1484 aa16.4■□□□□ 0.22
LAMP3-201ENST00000265598 IFT140Q96RY7 1462 aa16.4■□□□□ 0.22
LAMP3-201ENST00000265598 CCNB3Q8WWL7 1395 aa16.39■□□□□ 0.21
LAMP3-201ENST00000265598 PCF11O94913 1555 aaKnown RBP16.37■□□□□ 0.21
LAMP3-201ENST00000265598 MTUS2Q5JR59 1369 aa16.37■□□□□ 0.21
LAMP3-201ENST00000265598 CTTNBP2Q8WZ74 1663 aa16.36■□□□□ 0.21
LAMP3-201ENST00000265598 FMN1Q68DA7 1419 aa16.36■□□□□ 0.21
LAMP3-201ENST00000265598 TIAM1Q13009 1591 aa16.35■□□□□ 0.21
LAMP3-201ENST00000265598 WDR62O43379 1518 aa16.35■□□□□ 0.21
LAMP3-201ENST00000265598 SNAPC4Q5SXM2 1469 aa16.35■□□□□ 0.21
LAMP3-201ENST00000265598 LRRC9Q6ZRR7 1453 aa16.34■□□□□ 0.21
LAMP3-201ENST00000265598 PHLDB1Q86UU1 1377 aa16.34■□□□□ 0.21
LAMP3-201ENST00000265598 PBRM1Q86U86 1689 aa16.33■□□□□ 0.2
LAMP3-201ENST00000265598 EFCAB5A4FU69 1503 aa16.33■□□□□ 0.2
LAMP3-201ENST00000265598 CASKIN1Q8WXD9 1431 aa16.31■□□□□ 0.2
LAMP3-201ENST00000265598 RRBP1Q9P2E9 1410 aaKnown RBP16.28■□□□□ 0.2
LAMP3-201ENST00000265598 ADAMTS12P58397 1594 aa16.28■□□□□ 0.2
LAMP3-201ENST00000265598 FYCO1Q9BQS8 1478 aa16.28■□□□□ 0.2
LAMP3-201ENST00000265598 EIF4G3O43432 1585 aaKnown RBP16.26■□□□□ 0.19
LAMP3-201ENST00000265598 IQGAP2Q13576 1575 aa16.25■□□□□ 0.19
LAMP3-201ENST00000265598 THOC2Q8NI27 1593 aaKnown RBP16.23■□□□□ 0.19
LAMP3-201ENST00000265598 GRIN2AQ12879 1464 aa16.21■□□□□ 0.19
LAMP3-201ENST00000265598 CHIC2Q9UKJ5 165 aa16.21■□□□□ 0.19
LAMP3-201ENST00000265598 JPH4Q96JJ6 628 aa16.21■□□□□ 0.18
LAMP3-201ENST00000265598 MAP3K1Q13233 1512 aa16.2■□□□□ 0.18
LAMP3-201ENST00000265598 RAB3GAP2Q9H2M9 1393 aa16.19■□□□□ 0.18
LAMP3-201ENST00000265598 SAMD9Q5K651 1589 aa16.18■□□□□ 0.18
LAMP3-201ENST00000265598 DHX57Q6P158 1386 aaKnown RBP16.18■□□□□ 0.18
LAMP3-201ENST00000265598 NEUROD1Q13562 356 aa16.18■□□□□ 0.18
LAMP3-201ENST00000265598 KIAA0586Q9BVV6 1533 aa16.17■□□□□ 0.18
LAMP3-201ENST00000265598 DIEXFQ68CQ4 756 aaKnown RBP16.17■□□□□ 0.18
LAMP3-201ENST00000265598 CFAP43Q8NDM7 1665 aa16.15■□□□□ 0.18
LAMP3-201ENST00000265598 SYNJ2O15056 1496 aa16.15■□□□□ 0.18
LAMP3-201ENST00000265598 CDK13Q14004 1512 aaKnown RBP16.15■□□□□ 0.18
LAMP3-201ENST00000265598 MAGI1Q96QZ7 1491 aaPredicted RBP16.14■□□□□ 0.17
LAMP3-201ENST00000265598 ZNF316A6NFI3 1004 aaPredicted RBP16.13■□□□□ 0.17
LAMP3-201ENST00000265598 RRP7BPQ9NSQ0 103 aa16.13■□□□□ 0.17
LAMP3-201ENST00000265598 NCOA2Q15596 1464 aa16.13■□□□□ 0.17
LAMP3-201ENST00000265598 ZNF777Q9ULD5 760 aaPredicted RBP16.12■□□□□ 0.17
LAMP3-201ENST00000265598 FGD6Q6ZV73 1430 aa16.12■□□□□ 0.17
LAMP3-201ENST00000265598 SETD5Q9C0A6 1442 aa16.12■□□□□ 0.17
LAMP3-201ENST00000265598 CDK11AQ9UQ88 783 aaPredicted RBP16.11■□□□□ 0.17
LAMP3-201ENST00000265598 EPRSP07814 1512 aaKnown RBP16.09■□□□□ 0.17
LAMP3-201ENST00000265598 SIN3AQ96ST3 1273 aa16.09■□□□□ 0.17
LAMP3-201ENST00000265598 DISP1Q96F81 1524 aa16.08■□□□□ 0.16
LAMP3-201ENST00000265598 CARMIL2Q6F5E8 1435 aa16.08■□□□□ 0.16
LAMP3-201ENST00000265598 UGGT2Q9NYU1 1516 aa16.07■□□□□ 0.16
LAMP3-201ENST00000265598 CEP170Q5SW79 1584 aa16.06■□□□□ 0.16
LAMP3-201ENST00000265598 TRIM52Q96A61 297 aa16.06■□□□□ 0.16
LAMP3-201ENST00000265598 MYOM3Q5VTT5 1437 aa16.06■□□□□ 0.16
LAMP3-201ENST00000265598 HECW1Q76N89 1606 aa16.06■□□□□ 0.16
LAMP3-201ENST00000265598 CCDC18Q5T9S5 1454 aa16.05■□□□□ 0.16
LAMP3-201ENST00000265598 PLB1Q6P1J6 1458 aa16.05■□□□□ 0.16
LAMP3-201ENST00000265598 LRRIQ1Q96JM4 1722 aa16.05■□□□□ 0.16
LAMP3-201ENST00000265598 MAGI3Q5TCQ9 1506 aa16.05■□□□□ 0.16
LAMP3-201ENST00000265598 KIAA0556O60303 1618 aa16.04■□□□□ 0.16
LAMP3-201ENST00000265598 ZNF644Q9H582 1327 aaPredicted RBP16.03■□□□□ 0.16
LAMP3-201ENST00000265598 EHBP1L1Q8N3D4 1523 aa16.03■□□□□ 0.16
LAMP3-201ENST00000265598 SUPT6HQ7KZ85 1726 aaKnown RBP16.01■□□□□ 0.15
LAMP3-201ENST00000265598 CLSPNQ9HAW4 1339 aa16.01■□□□□ 0.15
LAMP3-201ENST00000265598 PLEKHD1A6NEE1 506 aa16■□□□□ 0.15
LAMP3-201ENST00000265598 CFDP1Q9UEE9 299 aaPredicted RBP16■□□□□ 0.15
LAMP3-201ENST00000265598 PTPRKQ15262 1439 aa15.99■□□□□ 0.15
LAMP3-201ENST00000265598 PRG4Q92954 1404 aaPredicted RBP15.99■□□□□ 0.15
LAMP3-201ENST00000265598 NUP153P49790 1475 aaKnown RBP15.99■□□□□ 0.15
LAMP3-201ENST00000265598 NUP160Q12769 1436 aa15.98■□□□□ 0.15
LAMP3-201ENST00000265598 PTPRGP23470 1445 aa15.95■□□□□ 0.14
LAMP3-201ENST00000265598 RAPGEF6Q8TEU7 1601 aa15.94■□□□□ 0.14
LAMP3-201ENST00000265598 YTHDC1Q96MU7 727 aaKnown RBP15.94■□□□□ 0.14
LAMP3-201ENST00000265598 KCNH8Q96L42 1107 aa15.93■□□□□ 0.14
LAMP3-201ENST00000265598 PTPN23Q9H3S7 1636 aa15.93■□□□□ 0.14
LAMP3-201ENST00000265598 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.92■□□□□ 0.14
LAMP3-201ENST00000265598 HIRIP3Q9BW71 556 aaPredicted RBP15.9■□□□□ 0.14
LAMP3-201ENST00000265598 FOXD1Q16676 465 aa15.9■□□□□ 0.14
LAMP3-201ENST00000265598 TROQ12816 1431 aaPredicted RBP15.88■□□□□ 0.13
LAMP3-201ENST00000265598 NAIPQ13075 1403 aa15.88■□□□□ 0.13
LAMP3-201ENST00000265598 MAPKBP1O60336 1514 aa15.87■□□□□ 0.13
LAMP3-201ENST00000265598 MIER1Q8N108 512 aa15.87■□□□□ 0.13
LAMP3-201ENST00000265598 HFM1A2PYH4 1435 aa15.87■□□□□ 0.13
LAMP3-201ENST00000265598 CHD1O14646 1710 aa15.86■□□□□ 0.13
LAMP3-201ENST00000265598 TONSLQ96HA7 1378 aa15.85■□□□□ 0.13
LAMP3-201ENST00000265598 MIA2Q96PC5 1412 aa15.84■□□□□ 0.13
LAMP3-201ENST00000265598 ARHGEF11O15085 1522 aa15.83■□□□□ 0.12
LAMP3-201ENST00000265598 ATP10BO94823 1461 aa15.82■□□□□ 0.12
LAMP3-201ENST00000265598 HNRNPMP52272 730 aaKnown RBP eCLIP15.82■□□□□ 0.12
LAMP3-201ENST00000265598 SLC4A1APQ9BWU0 796 aaKnown RBP15.8■□□□□ 0.12
LAMP3-201ENST00000265598 UACAQ9BZF9 1416 aa15.8■□□□□ 0.12
LAMP3-201ENST00000265598 MPHOSPH9Q99550 1183 aa15.79■□□□□ 0.12
LAMP3-201ENST00000265598 TSPY4P0CV99 314 aa15.79■□□□□ 0.12
LAMP3-201ENST00000265598 TSPY10P0CW01 314 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms