RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 ZBTB47Q9UFB7 747 aaPredicted RBP23.33■■□□□ 1.32
SRF-201ENST00000265354 WIZO95785 1651 aa23.31■■□□□ 1.32
SRF-201ENST00000265354 VPS8Q8N3P4 1428 aa23.29■■□□□ 1.32
SRF-201ENST00000265354 ZNF777Q9ULD5 760 aaPredicted RBP23.28■■□□□ 1.32
SRF-201ENST00000265354 CCNB3Q8WWL7 1395 aa23.27■■□□□ 1.32
SRF-201ENST00000265354 DHX57Q6P158 1386 aaKnown RBP23.24■■□□□ 1.31
SRF-201ENST00000265354 SLC4A1APQ9BWU0 796 aaKnown RBP23.23■■□□□ 1.31
SRF-201ENST00000265354 EIF4G2P78344 907 aaKnown RBP eCLIP23.22■■□□□ 1.312e-7■■■□□ 18.8
SRF-201ENST00000265354 TMC1Q8TDI8 760 aa23.21■■□□□ 1.31
SRF-201ENST00000265354 MYT1LQ9UL68 1186 aa23.2■■□□□ 1.3
SRF-201ENST00000265354 DEKP35659 375 aaKnown RBP23.18■■□□□ 1.3
SRF-201ENST00000265354 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.17■■□□□ 1.3
SRF-201ENST00000265354 RAB3GAP2Q9H2M9 1393 aa23.17■■□□□ 1.3
SRF-201ENST00000265354 KDM2AQ9Y2K7 1162 aa23.15■■□□□ 1.3
SRF-201ENST00000265354 PPP4R2Q9NY27 417 aa23.14■■□□□ 1.29
SRF-201ENST00000265354 LAS1LQ9Y4W2 734 aaKnown RBP23.14■■□□□ 1.29
SRF-201ENST00000265354 ARXQ96QS3 562 aa23.13■■□□□ 1.29
SRF-201ENST00000265354 MTUS2Q5JR59 1369 aa23.12■■□□□ 1.29
SRF-201ENST00000265354 BAZ1AQ9NRL2 1556 aaPredicted RBP23.09■■□□□ 1.29
SRF-201ENST00000265354 GLIPR1L2Q4G1C9 344 aa23.09■■□□□ 1.29
SRF-201ENST00000265354 RAPGEF2Q9Y4G8 1499 aa23.09■■□□□ 1.29
SRF-201ENST00000265354 FOXD1Q16676 465 aa23.08■■□□□ 1.29
SRF-201ENST00000265354 NOP58Q9Y2X3 529 aaKnown RBP23.06■■□□□ 1.28
SRF-201ENST00000265354 FBLN2P98095 1184 aa23.06■■□□□ 1.28
SRF-201ENST00000265354 PPP1R15AO75807 674 aaPredicted RBP23.05■■□□□ 1.28
SRF-201ENST00000265354 CCER2I3L3R5 266 aa23.04■■□□□ 1.28
SRF-201ENST00000265354 HSPA5P11021 654 aaKnown RBP23■■□□□ 1.27
SRF-201ENST00000265354 BAZ1BQ9UIG0 1483 aaKnown RBP22.99■■□□□ 1.27
SRF-201ENST00000265354 SETD5Q9C0A6 1442 aa22.98■■□□□ 1.27
SRF-201ENST00000265354 KIF27Q86VH2 1401 aa22.92■■□□□ 1.26
SRF-201ENST00000265354 NEFMP07197 916 aa22.92■■□□□ 1.26
SRF-201ENST00000265354 NACADO15069 1562 aa22.91■■□□□ 1.26
SRF-201ENST00000265354 CANXP27824 592 aaKnown RBP22.9■■□□□ 1.26
SRF-201ENST00000265354 ANO8Q9HCE9 1232 aaPredicted RBP22.85■■□□□ 1.25
SRF-201ENST00000265354 RGL3Q3MIN7 710 aa22.82■■□□□ 1.24
SRF-201ENST00000265354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.81■■□□□ 1.24
SRF-201ENST00000265354 TIMELESSQ9UNS1 1208 aa22.78■■□□□ 1.24
SRF-201ENST00000265354 MSH5O43196 834 aa22.74■■□□□ 1.23
SRF-201ENST00000265354 CARMIL1Q5VZK9 1371 aa22.74■■□□□ 1.23
SRF-201ENST00000265354 RGS3P49796 1198 aa22.73■■□□□ 1.23
SRF-201ENST00000265354 L3MBTL2Q969R5 705 aa22.73■■□□□ 1.23
SRF-201ENST00000265354 TOP2AP11388 1531 aaKnown RBP22.73■■□□□ 1.23
SRF-201ENST00000265354 CUX2O14529 1486 aa22.7■■□□□ 1.22
SRF-201ENST00000265354 CARD11Q9BXL7 1154 aa22.7■■□□□ 1.22
SRF-201ENST00000265354 CCDC184Q52MB2 194 aa22.65■■□□□ 1.22
SRF-201ENST00000265354 CC2D1BQ5T0F9 858 aaKnown RBP22.65■■□□□ 1.22
SRF-201ENST00000265354 FANCIQ9NVI1 1328 aa22.63■■□□□ 1.21
SRF-201ENST00000265354 PAK3O75914 559 aaPredicted RBP22.62■■□□□ 1.21
SRF-201ENST00000265354 IPO9Q96P70 1041 aaKnown RBP22.62■■□□□ 1.21
SRF-201ENST00000265354 PRKRIP1Q9H875 184 aaPredicted RBP22.61■■□□□ 1.21
SRF-201ENST00000265354 MPHOSPH9Q99550 1183 aa22.61■■□□□ 1.21
SRF-201ENST00000265354 SENP3Q9H4L4 574 aaPredicted RBP22.61■■□□□ 1.21
SRF-201ENST00000265354 SLC4A3P48751 1232 aa22.6■■□□□ 1.21
SRF-201ENST00000265354 WDR43Q15061 677 aaKnown RBP eCLIP22.6■■□□□ 1.21
SRF-201ENST00000265354 KIF21BO75037 1637 aa22.6■■□□□ 1.21
SRF-201ENST00000265354 SMARCA2P51531 1590 aa22.55■■□□□ 1.2
SRF-201ENST00000265354 FHOD3Q2V2M9 1422 aa22.55■■□□□ 1.2
SRF-201ENST00000265354 PPM1GO15355 546 aaPredicted RBP22.55■■□□□ 1.2
SRF-201ENST00000265354 PHLDB1Q86UU1 1377 aa22.53■■□□□ 1.2
SRF-201ENST00000265354 TSPY4P0CV99 314 aa22.53■■□□□ 1.2
SRF-201ENST00000265354 TSPY10P0CW01 314 aa22.53■■□□□ 1.2
SRF-201ENST00000265354 NEUROD2Q15784 382 aa22.53■■□□□ 1.2
SRF-201ENST00000265354 ARHGAP35Q9NRY4 1499 aa22.53■■□□□ 1.2
SRF-201ENST00000265354 FHAD1B1AJZ9 1412 aa22.53■■□□□ 1.2
SRF-201ENST00000265354 PLIN1O60240 522 aa22.52■■□□□ 1.2
SRF-201ENST00000265354 DCAF11Q8TEB1 546 aa22.52■■□□□ 1.2
SRF-201ENST00000265354 NUDCQ9Y266 331 aa22.52■■□□□ 1.19
SRF-201ENST00000265354 ERICH6BQ5W0A0 696 aa22.51■■□□□ 1.19
SRF-201ENST00000265354 CFDP1Q9UEE9 299 aaPredicted RBP22.51■■□□□ 1.19
SRF-201ENST00000265354 WASHC2AQ641Q2 1341 aa22.5■■□□□ 1.19
SRF-201ENST00000265354 ARAP1Q96P48 1450 aa22.49■■□□□ 1.19
SRF-201ENST00000265354 RCAN3Q9UKA8 241 aa22.49■■□□□ 1.19
SRF-201ENST00000265354 DDRGK1Q96HY6 314 aa22.48■■□□□ 1.19
SRF-201ENST00000265354 EXOC6Q8TAG9 804 aa22.48■■□□□ 1.19
SRF-201ENST00000265354 UPF2Q9HAU5 1272 aaKnown RBP22.47■■□□□ 1.19
SRF-201ENST00000265354 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.47■■□□□ 1.19
SRF-201ENST00000265354 CHGAP10645 457 aaKnown RBP22.46■■□□□ 1.19
SRF-201ENST00000265354 HSP90AA1P07900 732 aaKnown RBP22.45■■□□□ 1.18
SRF-201ENST00000265354 SPRYD3Q8NCJ5 442 aa22.45■■□□□ 1.18
SRF-201ENST00000265354 SMARCA4P51532 1647 aa22.44■■□□□ 1.18
SRF-201ENST00000265354 ARID4BQ4LE39 1312 aaPredicted RBP22.44■■□□□ 1.18
SRF-201ENST00000265354 PKD2Q13563 968 aa22.43■■□□□ 1.18
SRF-201ENST00000265354 IL27Q8NEV9 243 aa22.42■■□□□ 1.18
SRF-201ENST00000265354 WDR97A6NE52 1622 aa22.4■■□□□ 1.18
SRF-201ENST00000265354 FRAT1Q92837 279 aaPredicted RBP22.4■■□□□ 1.18
SRF-201ENST00000265354 NAP1L5Q96NT1 182 aaPredicted RBP22.39■■□□□ 1.18
SRF-201ENST00000265354 ZBED9Q6R2W3 1325 aa22.39■■□□□ 1.18
SRF-201ENST00000265354 PDE4AP27815 886 aa22.39■■□□□ 1.17
SRF-201ENST00000265354 TNNT2P45379 298 aaPredicted RBP22.38■■□□□ 1.17
SRF-201ENST00000265354 SLKQ9H2G2 1235 aaPredicted RBP22.36■■□□□ 1.17
SRF-201ENST00000265354 TDRD9Q8NDG6 1382 aaKnown RBP22.35■■□□□ 1.17
SRF-201ENST00000265354 VSIG10Q8N0Z9 540 aa22.35■■□□□ 1.17
SRF-201ENST00000265354 SYNJ1O43426 1573 aa22.34■■□□□ 1.17
SRF-201ENST00000265354 TCERG1O14776 1098 aaKnown RBP22.33■■□□□ 1.17
SRF-201ENST00000265354 KNSTRNQ9Y448 316 aa22.33■■□□□ 1.16
SRF-201ENST00000265354 FMN1Q68DA7 1419 aa22.32■■□□□ 1.16
SRF-201ENST00000265354 RRBP1Q9P2E9 1410 aaKnown RBP22.32■■□□□ 1.16
SRF-201ENST00000265354 ST20-MTHFSA0A0A6YYL1 179 aa22.31■■□□□ 1.16
SRF-201ENST00000265354 ATAD2BQ9ULI0 1458 aa22.3■■□□□ 1.16
SRF-201ENST00000265354 AKNAQ7Z591 1439 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms