RNA–Protein interactions for RNA: ENST00000265073.8

SUB1-201, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUB1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-201ENST00000265073 ZNF608Q9ULD9 1512 aaPredicted RBP13.3□□□□□ -0.28
SUB1-201ENST00000265073 FAM50AQ14320 339 aaKnown RBP13.25□□□□□ -0.29
SUB1-201ENST00000265073 MRC2Q9UBG0 1479 aa13.23□□□□□ -0.29
SUB1-201ENST00000265073 ZEB1P37275 1124 aaPredicted RBP13.23□□□□□ -0.29
SUB1-201ENST00000265073 CHMP7Q8WUX9 453 aaPredicted RBP13.18□□□□□ -0.3
SUB1-201ENST00000265073 TARBP1Q13395 1621 aaKnown RBP13.17□□□□□ -0.3
SUB1-201ENST00000265073 ABCA5Q8WWZ7 1642 aa13.15□□□□□ -0.3
SUB1-201ENST00000265073 WDR97A6NE52 1622 aa13.14□□□□□ -0.31
SUB1-201ENST00000265073 PHLDB1Q86UU1 1377 aa13.12□□□□□ -0.31
SUB1-201ENST00000265073 PCF11O94913 1555 aaKnown RBP13.12□□□□□ -0.31
SUB1-201ENST00000265073 SNAPC4Q5SXM2 1469 aa13.11□□□□□ -0.31
SUB1-201ENST00000265073 CUL7Q14999 1698 aa13.1□□□□□ -0.31
SUB1-201ENST00000265073 CCNB3Q8WWL7 1395 aa13.1□□□□□ -0.31
SUB1-201ENST00000265073 GRIN2BQ13224 1484 aa13.09□□□□□ -0.31
SUB1-201ENST00000265073 FHAD1B1AJZ9 1412 aa13.08□□□□□ -0.32
SUB1-201ENST00000265073 MTUS2Q5JR59 1369 aa13.07□□□□□ -0.32
SUB1-201ENST00000265073 IFT140Q96RY7 1462 aa13.07□□□□□ -0.32
SUB1-201ENST00000265073 LRRC9Q6ZRR7 1453 aa13.07□□□□□ -0.32
SUB1-201ENST00000265073 CHIC2Q9UKJ5 165 aa13.06□□□□□ -0.32
SUB1-201ENST00000265073 WDR62O43379 1518 aa13.06□□□□□ -0.32
SUB1-201ENST00000265073 TIAM1Q13009 1591 aa13.06□□□□□ -0.32
SUB1-201ENST00000265073 PBRM1Q86U86 1689 aa13.06□□□□□ -0.32
SUB1-201ENST00000265073 CTTNBP2Q8WZ74 1663 aa13.05□□□□□ -0.32
SUB1-201ENST00000265073 EIF4G3O43432 1585 aaKnown RBP13.03□□□□□ -0.32
SUB1-201ENST00000265073 NEUROD1Q13562 356 aa13.01□□□□□ -0.33
SUB1-201ENST00000265073 FMN1Q68DA7 1419 aa13.01□□□□□ -0.33
SUB1-201ENST00000265073 CASKIN1Q8WXD9 1431 aa13.01□□□□□ -0.33
SUB1-201ENST00000265073 ADAMTS12P58397 1594 aa13.01□□□□□ -0.33
SUB1-201ENST00000265073 THOC2Q8NI27 1593 aaKnown RBP13□□□□□ -0.33
SUB1-201ENST00000265073 JPH4Q96JJ6 628 aa13□□□□□ -0.33
SUB1-201ENST00000265073 RRBP1Q9P2E9 1410 aaKnown RBP12.99□□□□□ -0.33
SUB1-201ENST00000265073 CDK13Q14004 1512 aaKnown RBP12.98□□□□□ -0.33
SUB1-201ENST00000265073 RRP7BPQ9NSQ0 103 aa12.98□□□□□ -0.33
SUB1-201ENST00000265073 IQGAP2Q13576 1575 aa12.97□□□□□ -0.33
SUB1-201ENST00000265073 SIN3AQ96ST3 1273 aa12.97□□□□□ -0.33
SUB1-201ENST00000265073 RAB3GAP2Q9H2M9 1393 aa12.97□□□□□ -0.33
SUB1-201ENST00000265073 GRIN2AQ12879 1464 aa12.97□□□□□ -0.33
SUB1-201ENST00000265073 ZNF777Q9ULD5 760 aaPredicted RBP12.97□□□□□ -0.33
SUB1-201ENST00000265073 EFCAB5A4FU69 1503 aa12.96□□□□□ -0.33
SUB1-201ENST00000265073 DHX57Q6P158 1386 aaKnown RBP12.96□□□□□ -0.33
SUB1-201ENST00000265073 FYCO1Q9BQS8 1478 aa12.96□□□□□ -0.33
SUB1-201ENST00000265073 ZNF644Q9H582 1327 aaPredicted RBP12.94□□□□□ -0.34
SUB1-201ENST00000265073 DIEXFQ68CQ4 756 aaKnown RBP12.93□□□□□ -0.34
SUB1-201ENST00000265073 LRRIQ1Q96JM4 1722 aa12.93□□□□□ -0.34
SUB1-201ENST00000265073 SAMD9Q5K651 1589 aa12.92□□□□□ -0.34
SUB1-201ENST00000265073 MAGI3Q5TCQ9 1506 aa12.92□□□□□ -0.34
SUB1-201ENST00000265073 PLB1Q6P1J6 1458 aa12.91□□□□□ -0.34
SUB1-201ENST00000265073 KIAA0586Q9BVV6 1533 aa12.9□□□□□ -0.34
SUB1-201ENST00000265073 NCOA2Q15596 1464 aa12.9□□□□□ -0.34
SUB1-201ENST00000265073 DISP1Q96F81 1524 aa12.89□□□□□ -0.35
SUB1-201ENST00000265073 SYNJ2O15056 1496 aa12.89□□□□□ -0.35
SUB1-201ENST00000265073 CEP170Q5SW79 1584 aa12.89□□□□□ -0.35
SUB1-201ENST00000265073 HIRIP3Q9BW71 556 aaPredicted RBP12.89□□□□□ -0.35
SUB1-201ENST00000265073 PTPRKQ15262 1439 aa12.88□□□□□ -0.35
SUB1-201ENST00000265073 FGD6Q6ZV73 1430 aa12.88□□□□□ -0.35
SUB1-201ENST00000265073 ZNF316A6NFI3 1004 aaPredicted RBP12.88□□□□□ -0.35
SUB1-201ENST00000265073 CFAP43Q8NDM7 1665 aa12.87□□□□□ -0.35
SUB1-201ENST00000265073 EPRSP07814 1512 aaKnown RBP12.87□□□□□ -0.35
SUB1-201ENST00000265073 TRIM52Q96A61 297 aa12.87□□□□□ -0.35
SUB1-201ENST00000265073 SETD5Q9C0A6 1442 aa12.86□□□□□ -0.35
SUB1-201ENST00000265073 FOXD1Q16676 465 aa12.86□□□□□ -0.35
SUB1-201ENST00000265073 PRG4Q92954 1404 aaPredicted RBP12.86□□□□□ -0.35
SUB1-201ENST00000265073 MAGI1Q96QZ7 1491 aaPredicted RBP12.86□□□□□ -0.35
SUB1-201ENST00000265073 YTHDC1Q96MU7 727 aaKnown RBP12.85□□□□□ -0.35
SUB1-201ENST00000265073 MAP3K1Q13233 1512 aa12.85□□□□□ -0.35
SUB1-201ENST00000265073 KCNH8Q96L42 1107 aa12.83□□□□□ -0.36
SUB1-201ENST00000265073 KIAA0556O60303 1618 aa12.82□□□□□ -0.36
SUB1-201ENST00000265073 NUP153P49790 1475 aaKnown RBP12.82□□□□□ -0.36
SUB1-201ENST00000265073 MYOM3Q5VTT5 1437 aa12.82□□□□□ -0.36
SUB1-201ENST00000265073 UGGT2Q9NYU1 1516 aa12.81□□□□□ -0.36
SUB1-201ENST00000265073 CFDP1Q9UEE9 299 aaPredicted RBP12.8□□□□□ -0.36
SUB1-201ENST00000265073 CDK11AQ9UQ88 783 aaPredicted RBP12.8□□□□□ -0.36
SUB1-201ENST00000265073 CARMIL2Q6F5E8 1435 aa12.79□□□□□ -0.36
SUB1-201ENST00000265073 PLEKHD1A6NEE1 506 aa12.78□□□□□ -0.36
SUB1-201ENST00000265073 HECW1Q76N89 1606 aa12.78□□□□□ -0.36
SUB1-201ENST00000265073 NUP160Q12769 1436 aa12.77□□□□□ -0.37
SUB1-201ENST00000265073 MIER1Q8N108 512 aa12.77□□□□□ -0.37
SUB1-201ENST00000265073 PTPRGP23470 1445 aa12.76□□□□□ -0.37
SUB1-201ENST00000265073 SUPT6HQ7KZ85 1726 aaKnown RBP12.76□□□□□ -0.37
SUB1-201ENST00000265073 EHBP1L1Q8N3D4 1523 aa12.75□□□□□ -0.37
SUB1-201ENST00000265073 CCDC18Q5T9S5 1454 aa12.75□□□□□ -0.37
SUB1-201ENST00000265073 ERCC6L2Q5T890 1561 aa12.75□□□□□ -0.37
SUB1-201ENST00000265073 MAPKBP1O60336 1514 aa12.73□□□□□ -0.37
SUB1-201ENST00000265073 RAPGEF6Q8TEU7 1601 aa12.73□□□□□ -0.37
SUB1-201ENST00000265073 HNRNPMP52272 730 aaKnown RBP eCLIP12.73□□□□□ -0.371e-10■■■■■ 32.4
SUB1-201ENST00000265073 PTPN23Q9H3S7 1636 aa12.73□□□□□ -0.37
SUB1-201ENST00000265073 CHD1O14646 1710 aa12.73□□□□□ -0.37
SUB1-201ENST00000265073 NAIPQ13075 1403 aa12.71□□□□□ -0.37
SUB1-201ENST00000265073 KIF14Q15058 1648 aa12.69□□□□□ -0.38
SUB1-201ENST00000265073 ATP10BO94823 1461 aa12.69□□□□□ -0.38
SUB1-201ENST00000265073 ARHGEF11O15085 1522 aa12.68□□□□□ -0.38
SUB1-201ENST00000265073 KDM6BO15054 1643 aa12.68□□□□□ -0.38
SUB1-201ENST00000265073 TROQ12816 1431 aaPredicted RBP12.67□□□□□ -0.38
SUB1-201ENST00000265073 CLSPNQ9HAW4 1339 aa12.66□□□□□ -0.38
SUB1-201ENST00000265073 HFM1A2PYH4 1435 aa12.66□□□□□ -0.38
SUB1-201ENST00000265073 MPHOSPH9Q99550 1183 aa12.65□□□□□ -0.38
SUB1-201ENST00000265073 SLC4A1APQ9BWU0 796 aaKnown RBP12.65□□□□□ -0.38
SUB1-201ENST00000265073 ZNF326Q5BKZ1 582 aaKnown RBP12.64□□□□□ -0.39
SUB1-201ENST00000265073 ABCC5O15440 1437 aa12.64□□□□□ -0.39
SUB1-201ENST00000265073 DDX10Q13206 875 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms