RNA–Protein interactions for RNA: ENST00000264933.8

PDCD6-201, Transcript of programmed cell death 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDCD6, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-201ENST00000264933 CUL7Q14999 1698 aa22.43■■□□□ 1.18
PDCD6-201ENST00000264933 SHROOM2Q13796 1616 aa22.4■■□□□ 1.18
PDCD6-201ENST00000264933 EEA1Q15075 1411 aa22.38■■□□□ 1.17
PDCD6-201ENST00000264933 CARMIL1Q5VZK9 1371 aa22.38■■□□□ 1.17
PDCD6-201ENST00000264933 CSRNP3Q8WYN3 585 aa22.35■■□□□ 1.17
PDCD6-201ENST00000264933 PRXQ9BXM0 1461 aa22.33■■□□□ 1.16
PDCD6-201ENST00000264933 FAM9AQ8IZU1 332 aaPredicted RBP22.32■■□□□ 1.16
PDCD6-201ENST00000264933 RAPGEF2Q9Y4G8 1499 aa22.28■■□□□ 1.16
PDCD6-201ENST00000264933 PRG4Q92954 1404 aaPredicted RBP22.25■■□□□ 1.15
PDCD6-201ENST00000264933 JPH4Q96JJ6 628 aa22.23■■□□□ 1.15
PDCD6-201ENST00000264933 KIF21BO75037 1637 aa22.2■■□□□ 1.14
PDCD6-201ENST00000264933 KIAA0586Q9BVV6 1533 aa22.12■■□□□ 1.13
PDCD6-201ENST00000264933 CTTNBP2Q8WZ74 1663 aa22.11■■□□□ 1.13
PDCD6-201ENST00000264933 GOLGA3Q08378 1498 aa22.03■■□□□ 1.12
PDCD6-201ENST00000264933 IQGAP2Q13576 1575 aa22.03■■□□□ 1.12
PDCD6-201ENST00000264933 ADCY10Q96PN6 1610 aa22.02■■□□□ 1.12
PDCD6-201ENST00000264933 KIF13AQ9H1H9 1805 aa22.02■■□□□ 1.12
PDCD6-201ENST00000264933 MAPKBP1O60336 1514 aa21.98■■□□□ 1.11
PDCD6-201ENST00000264933 EHMT2Q96KQ7 1210 aa21.98■■□□□ 1.11
PDCD6-201ENST00000264933 UGGT2Q9NYU1 1516 aa21.96■■□□□ 1.11
PDCD6-201ENST00000264933 ABCC10Q5T3U5 1492 aa21.96■■□□□ 1.11
PDCD6-201ENST00000264933 UBTFP17480 764 aaKnown RBP21.91■■□□□ 1.1
PDCD6-201ENST00000264933 DIP2BQ9P265 1576 aa21.91■■□□□ 1.1
PDCD6-201ENST00000264933 DISP1Q96F81 1524 aa21.9■■□□□ 1.1
PDCD6-201ENST00000264933 LOC105371045A0A1W2PR82 267 aa21.89■■□□□ 1.09
PDCD6-201ENST00000264933 PTPRGP23470 1445 aa21.89■■□□□ 1.09
PDCD6-201ENST00000264933 FAM69CQ0P6D2 419 aa21.88■■□□□ 1.09
PDCD6-201ENST00000264933 NPM1P06748 294 aaKnown RBP eCLIP21.87■■□□□ 1.09
PDCD6-201ENST00000264933 TNIKQ9UKE5 1360 aa21.86■■□□□ 1.09
PDCD6-201ENST00000264933 KIAA0556O60303 1618 aa21.85■■□□□ 1.09
PDCD6-201ENST00000264933 SAMD9Q5K651 1589 aa21.84■■□□□ 1.09
PDCD6-201ENST00000264933 CARMIL2Q6F5E8 1435 aa21.84■■□□□ 1.09
PDCD6-201ENST00000264933 ABCC2Q92887 1545 aa21.8■■□□□ 1.08
PDCD6-201ENST00000264933 TTBK1Q5TCY1 1321 aaPredicted RBP21.79■■□□□ 1.08
PDCD6-201ENST00000264933 UHRF1BP1LA0JNW5 1464 aa21.77■■□□□ 1.08
PDCD6-201ENST00000264933 RANGAP1P46060 587 aaPredicted RBP21.75■■□□□ 1.07
PDCD6-201ENST00000264933 UACAQ9BZF9 1416 aa21.74■■□□□ 1.07
PDCD6-201ENST00000264933 ARHGAP35Q9NRY4 1499 aa21.74■■□□□ 1.07
PDCD6-201ENST00000264933 EFCAB5A4FU69 1503 aa21.73■■□□□ 1.07
PDCD6-201ENST00000264933 ASXL2Q76L83 1435 aa21.72■■□□□ 1.07
PDCD6-201ENST00000264933 P3H3Q8IVL6 736 aa21.72■■□□□ 1.07
PDCD6-201ENST00000264933 PLB1Q6P1J6 1458 aa21.68■■□□□ 1.06
PDCD6-201ENST00000264933 KDM5BQ9UGL1 1544 aa21.68■■□□□ 1.06
PDCD6-201ENST00000264933 FHOD3Q2V2M9 1422 aa21.67■■□□□ 1.06
PDCD6-201ENST00000264933 GLI2P10070 1586 aa21.66■■□□□ 1.06
PDCD6-201ENST00000264933 TSPOAP1O95153 1857 aa21.66■■□□□ 1.06
PDCD6-201ENST00000264933 KDM6BO15054 1643 aa21.66■■□□□ 1.06
PDCD6-201ENST00000264933 CLIP1P30622 1438 aa21.64■■□□□ 1.06
PDCD6-201ENST00000264933 CEP162Q5TB80 1403 aa21.63■■□□□ 1.05
PDCD6-201ENST00000264933 PPRC1Q5VV67 1664 aaKnown RBP21.63■■□□□ 1.05
PDCD6-201ENST00000264933 ABCA8O94911 1581 aa21.61■■□□□ 1.05
PDCD6-201ENST00000264933 ZCCHC11Q5TAX3 1644 aaKnown RBP21.61■■□□□ 1.05
PDCD6-201ENST00000264933 EPRSP07814 1512 aaKnown RBP21.6■■□□□ 1.05
PDCD6-201ENST00000264933 MAP3K4Q9Y6R4 1608 aa21.55■■□□□ 1.04
PDCD6-201ENST00000264933 RAPGEF6Q8TEU7 1601 aa21.54■■□□□ 1.04
PDCD6-201ENST00000264933 COL17A1Q9UMD9 1497 aaPredicted RBP21.52■■□□□ 1.03
PDCD6-201ENST00000264933 WDR7Q9Y4E6 1490 aa21.51■■□□□ 1.03
PDCD6-201ENST00000264933 FMN1Q68DA7 1419 aa21.5■■□□□ 1.03
PDCD6-201ENST00000264933 KDM4FA0A1W2PPD8 638 aa21.49■■□□□ 1.03
PDCD6-201ENST00000264933 LRRIQ1Q96JM4 1722 aa21.47■■□□□ 1.03
PDCD6-201ENST00000264933 NUP153P49790 1475 aaKnown RBP21.46■■□□□ 1.03
PDCD6-201ENST00000264933 ATP10BO94823 1461 aa21.43■■□□□ 1.02
PDCD6-201ENST00000264933 PCF11O94913 1555 aaKnown RBP21.43■■□□□ 1.02
PDCD6-201ENST00000264933 TEX14Q8IWB6 1497 aa21.42■■□□□ 1.02
PDCD6-201ENST00000264933 CASKIN1Q8WXD9 1431 aa21.42■■□□□ 1.02
PDCD6-201ENST00000264933 HECW1Q76N89 1606 aa21.39■■□□□ 1.01
PDCD6-201ENST00000264933 MAGI3Q5TCQ9 1506 aa21.37■■□□□ 1.01
PDCD6-201ENST00000264933 ARID3CA6NKF2 412 aa21.36■■□□□ 1.01
PDCD6-201ENST00000264933 VPS8Q8N3P4 1428 aa21.36■■□□□ 1.01
PDCD6-201ENST00000264933 FYCO1Q9BQS8 1478 aa21.35■■□□□ 1.01
PDCD6-201ENST00000264933 CD109Q6YHK3 1445 aa21.35■■□□□ 1.01
PDCD6-201ENST00000264933 CDK13Q14004 1512 aaKnown RBP21.34■■□□□ 1.01
PDCD6-201ENST00000264933 CFAP43Q8NDM7 1665 aa21.34■■□□□ 1.01
PDCD6-201ENST00000264933 KCNH8Q96L42 1107 aa21.33■■□□□ 1.01
PDCD6-201ENST00000264933 ATP1B4Q9UN42 357 aaPredicted RBP21.31■■□□□ 1
PDCD6-201ENST00000264933 ADGRL1O94910 1474 aa21.31■■□□□ 1
PDCD6-201ENST00000264933 CCDC18Q5T9S5 1454 aa21.25■□□□□ 0.99
PDCD6-201ENST00000264933 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.24■□□□□ 0.99
PDCD6-201ENST00000264933 HNRNPUL2Q1KMD3 747 aaKnown RBP21.24■□□□□ 0.99
PDCD6-201ENST00000264933 ABCA9Q8IUA7 1624 aa21.22■□□□□ 0.99
PDCD6-201ENST00000264933 ARAP3Q8WWN8 1544 aa21.19■□□□□ 0.98
PDCD6-201ENST00000264933 PLEKHD1A6NEE1 506 aa21.19■□□□□ 0.98
PDCD6-201ENST00000264933 TIAM1Q13009 1591 aa21.18■□□□□ 0.98
PDCD6-201ENST00000264933 MAP3K1Q13233 1512 aa21.17■□□□□ 0.98
PDCD6-201ENST00000264933 TROQ12816 1431 aaPredicted RBP21.14■□□□□ 0.98
PDCD6-201ENST00000264933 CDK11AQ9UQ88 783 aaPredicted RBP21.13■□□□□ 0.97
PDCD6-201ENST00000264933 KIF14Q15058 1648 aa21.13■□□□□ 0.97
PDCD6-201ENST00000264933 PHLDB1Q86UU1 1377 aa21.1■□□□□ 0.97
PDCD6-201ENST00000264933 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.1■□□□□ 0.972e-6■■■■■ 26.8
PDCD6-201ENST00000264933 NEO1Q92859 1461 aa21.09■□□□□ 0.97
PDCD6-201ENST00000264933 KANK4Q5T7N3 995 aaPredicted RBP21.09■□□□□ 0.97
PDCD6-201ENST00000264933 FRMPD1Q5SYB0 1578 aa21.08■□□□□ 0.97
PDCD6-201ENST00000264933 LRRC9Q6ZRR7 1453 aa21.07■□□□□ 0.96
PDCD6-201ENST00000264933 TTC37Q6PGP7 1564 aa21.07■□□□□ 0.96
PDCD6-201ENST00000264933 EHBP1L1Q8N3D4 1523 aa21.06■□□□□ 0.96
PDCD6-201ENST00000264933 RAPGEF3O95398 923 aa21.05■□□□□ 0.96
PDCD6-201ENST00000264933 MTUS2Q5JR59 1369 aa21.04■□□□□ 0.96
PDCD6-201ENST00000264933 HECW2Q9P2P5 1572 aa21.01■□□□□ 0.95
PDCD6-201ENST00000264933 CDC42BPAQ5VT25 1732 aa21■□□□□ 0.95
PDCD6-201ENST00000264933 SUPT6HQ7KZ85 1726 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms