RNA–Protein interactions for RNA: ENST00000264160.8

R3HDM1-201, Transcript of R3H domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene R3HDM1, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-201ENST00000264160 IFT140Q96RY7 1462 aa7.48□□□□□ -1.21
R3HDM1-201ENST00000264160 EIF4G3O43432 1585 aaKnown RBP7.47□□□□□ -1.21
R3HDM1-201ENST00000264160 ADAMTS12P58397 1594 aa7.45□□□□□ -1.22
R3HDM1-201ENST00000264160 P3H3Q8IVL6 736 aa7.45□□□□□ -1.22
R3HDM1-201ENST00000264160 GRIN2BQ13224 1484 aa7.44□□□□□ -1.22
R3HDM1-201ENST00000264160 SNAPC4Q5SXM2 1469 aa7.43□□□□□ -1.22
R3HDM1-201ENST00000264160 FHAD1B1AJZ9 1412 aa7.42□□□□□ -1.22
R3HDM1-201ENST00000264160 FHOD3Q2V2M9 1422 aa7.42□□□□□ -1.22
R3HDM1-201ENST00000264160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.4□□□□□ -1.22
R3HDM1-201ENST00000264160 HNRNPUL2Q1KMD3 747 aaKnown RBP7.4□□□□□ -1.22
R3HDM1-201ENST00000264160 PCF11O94913 1555 aaKnown RBP7.4□□□□□ -1.23
R3HDM1-201ENST00000264160 KANK4Q5T7N3 995 aaPredicted RBP7.39□□□□□ -1.23
R3HDM1-201ENST00000264160 EFCAB5A4FU69 1503 aa7.38□□□□□ -1.23
R3HDM1-201ENST00000264160 SAMD9Q5K651 1589 aa7.38□□□□□ -1.23
R3HDM1-201ENST00000264160 HRCP23327 699 aa7.37□□□□□ -1.23
R3HDM1-201ENST00000264160 IQGAP2Q13576 1575 aa7.37□□□□□ -1.23
R3HDM1-201ENST00000264160 FBLN2P98095 1184 aa7.37□□□□□ -1.23
R3HDM1-201ENST00000264160 GRIN2AQ12879 1464 aa7.37□□□□□ -1.23
R3HDM1-201ENST00000264160 MAGI1Q96QZ7 1491 aaPredicted RBP7.36□□□□□ -1.23
R3HDM1-201ENST00000264160 CEP170Q5SW79 1584 aa7.36□□□□□ -1.23
R3HDM1-201ENST00000264160 TIAM1Q13009 1591 aa7.35□□□□□ -1.23
R3HDM1-201ENST00000264160 MYT1LQ9UL68 1186 aa7.35□□□□□ -1.23
R3HDM1-201ENST00000264160 LRRIQ1Q96JM4 1722 aa7.35□□□□□ -1.23
R3HDM1-201ENST00000264160 SYNJ2O15056 1496 aa7.35□□□□□ -1.23
R3HDM1-201ENST00000264160 CFAP43Q8NDM7 1665 aa7.35□□□□□ -1.23
R3HDM1-201ENST00000264160 CHMP7Q8WUX9 453 aaPredicted RBP7.34□□□□□ -1.23
R3HDM1-201ENST00000264160 FYCO1Q9BQS8 1478 aa7.33□□□□□ -1.24
R3HDM1-201ENST00000264160 CHD1O14646 1710 aa7.32□□□□□ -1.24
R3HDM1-201ENST00000264160 CASKIN1Q8WXD9 1431 aa7.32□□□□□ -1.24
R3HDM1-201ENST00000264160 FMN1Q68DA7 1419 aa7.31□□□□□ -1.24
R3HDM1-201ENST00000264160 KIAA0586Q9BVV6 1533 aa7.31□□□□□ -1.24
R3HDM1-201ENST00000264160 KIAA0556O60303 1618 aa7.31□□□□□ -1.24
R3HDM1-201ENST00000264160 UGGT2Q9NYU1 1516 aa7.31□□□□□ -1.24
R3HDM1-201ENST00000264160 LRRC9Q6ZRR7 1453 aa7.31□□□□□ -1.24
R3HDM1-201ENST00000264160 NPM1P06748 294 aaKnown RBP eCLIP7.3□□□□□ -1.24
R3HDM1-201ENST00000264160 DISP1Q96F81 1524 aa7.3□□□□□ -1.24
R3HDM1-201ENST00000264160 ARID3CA6NKF2 412 aa7.3□□□□□ -1.24
R3HDM1-201ENST00000264160 MAP3K1Q13233 1512 aa7.29□□□□□ -1.24
R3HDM1-201ENST00000264160 NUP160Q12769 1436 aa7.29□□□□□ -1.24
R3HDM1-201ENST00000264160 CDK11AQ9UQ88 783 aaPredicted RBP7.28□□□□□ -1.24
R3HDM1-201ENST00000264160 HECW1Q76N89 1606 aa7.27□□□□□ -1.25
R3HDM1-201ENST00000264160 PHLDB1Q86UU1 1377 aa7.27□□□□□ -1.25
R3HDM1-201ENST00000264160 CDK13Q14004 1512 aaKnown RBP7.27□□□□□ -1.25
R3HDM1-201ENST00000264160 RRBP1Q9P2E9 1410 aaKnown RBP7.26□□□□□ -1.25
R3HDM1-201ENST00000264160 MAGI3Q5TCQ9 1506 aa7.26□□□□□ -1.25
R3HDM1-201ENST00000264160 ITGAEP38570 1179 aa7.25□□□□□ -1.25
R3HDM1-201ENST00000264160 CCER1Q8TC90 406 aaPredicted RBP7.25□□□□□ -1.25
R3HDM1-201ENST00000264160 RAPGEF6Q8TEU7 1601 aa7.25□□□□□ -1.25
R3HDM1-201ENST00000264160 JPH4Q96JJ6 628 aa7.24□□□□□ -1.25
R3HDM1-201ENST00000264160 CCNB3Q8WWL7 1395 aa7.24□□□□□ -1.25
R3HDM1-201ENST00000264160 EPRSP07814 1512 aaKnown RBP7.24□□□□□ -1.25
R3HDM1-201ENST00000264160 MTUS2Q5JR59 1369 aa7.24□□□□□ -1.25
R3HDM1-201ENST00000264160 ZEB1P37275 1124 aaPredicted RBP7.24□□□□□ -1.25
R3HDM1-201ENST00000264160 CCDC18Q5T9S5 1454 aa7.23□□□□□ -1.25
R3HDM1-201ENST00000264160 PLB1Q6P1J6 1458 aa7.23□□□□□ -1.25
R3HDM1-201ENST00000264160 EHBP1L1Q8N3D4 1523 aa7.23□□□□□ -1.25
R3HDM1-201ENST00000264160 SUPT6HQ7KZ85 1726 aaKnown RBP7.23□□□□□ -1.25
R3HDM1-201ENST00000264160 NUP153P49790 1475 aaKnown RBP7.22□□□□□ -1.25
R3HDM1-201ENST00000264160 FAM50AQ14320 339 aaKnown RBP7.22□□□□□ -1.25
R3HDM1-201ENST00000264160 NCOA2Q15596 1464 aa7.22□□□□□ -1.25
R3HDM1-201ENST00000264160 PRG4Q92954 1404 aaPredicted RBP7.22□□□□□ -1.25
R3HDM1-201ENST00000264160 CARMIL2Q6F5E8 1435 aa7.21□□□□□ -1.25
R3HDM1-201ENST00000264160 ERCC6L2Q5T890 1561 aa7.21□□□□□ -1.25
R3HDM1-201ENST00000264160 SHROOM2Q13796 1616 aa7.2□□□□□ -1.26
R3HDM1-201ENST00000264160 FGD6Q6ZV73 1430 aa7.19□□□□□ -1.26
R3HDM1-201ENST00000264160 ARHGEF11O15085 1522 aa7.18□□□□□ -1.26
R3HDM1-201ENST00000264160 CLASP1Q7Z460 1538 aa7.18□□□□□ -1.26
R3HDM1-201ENST00000264160 ABCA8O94911 1581 aa7.18□□□□□ -1.26
R3HDM1-201ENST00000264160 MYOM3Q5VTT5 1437 aa7.18□□□□□ -1.26
R3HDM1-201ENST00000264160 PTPN23Q9H3S7 1636 aa7.17□□□□□ -1.26
R3HDM1-201ENST00000264160 KIF14Q15058 1648 aa7.16□□□□□ -1.26
R3HDM1-201ENST00000264160 PTPRGP23470 1445 aa7.16□□□□□ -1.26
R3HDM1-201ENST00000264160 PTPRKQ15262 1439 aa7.14□□□□□ -1.27
R3HDM1-201ENST00000264160 RAB3GAP2Q9H2M9 1393 aa7.14□□□□□ -1.27
R3HDM1-201ENST00000264160 ATP10BO94823 1461 aa7.14□□□□□ -1.27
R3HDM1-201ENST00000264160 ESF1Q9H501 851 aaKnown RBP7.14□□□□□ -1.27
R3HDM1-201ENST00000264160 DHX57Q6P158 1386 aaKnown RBP7.13□□□□□ -1.27
R3HDM1-201ENST00000264160 ADCY10Q96PN6 1610 aa7.13□□□□□ -1.27
R3HDM1-201ENST00000264160 TROQ12816 1431 aaPredicted RBP7.13□□□□□ -1.27
R3HDM1-201ENST00000264160 SETD5Q9C0A6 1442 aa7.12□□□□□ -1.27
R3HDM1-201ENST00000264160 TCOF1Q13428 1488 aaKnown RBP7.12□□□□□ -1.27
R3HDM1-201ENST00000264160 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.12□□□□□ -1.27
R3HDM1-201ENST00000264160 UACAQ9BZF9 1416 aa7.12□□□□□ -1.27
R3HDM1-201ENST00000264160 ZNF644Q9H582 1327 aaPredicted RBP7.11□□□□□ -1.27
R3HDM1-201ENST00000264160 ACIN1Q9UKV3 1341 aaKnown RBP7.11□□□□□ -1.27
R3HDM1-201ENST00000264160 CHIC2Q9UKJ5 165 aa7.11□□□□□ -1.27
R3HDM1-201ENST00000264160 ITSN2Q9NZM3 1697 aa7.1□□□□□ -1.27
R3HDM1-201ENST00000264160 CDC42BPAQ5VT25 1732 aa7.1□□□□□ -1.27
R3HDM1-201ENST00000264160 ABCC2Q92887 1545 aa7.1□□□□□ -1.27
R3HDM1-201ENST00000264160 PLEKHD1A6NEE1 506 aa7.09□□□□□ -1.27
R3HDM1-201ENST00000264160 ZCCHC11Q5TAX3 1644 aaKnown RBP7.09□□□□□ -1.27
R3HDM1-201ENST00000264160 MIA2Q96PC5 1412 aa7.09□□□□□ -1.27
R3HDM1-201ENST00000264160 ZNF777Q9ULD5 760 aaPredicted RBP7.09□□□□□ -1.27
R3HDM1-201ENST00000264160 PELP1Q8IZL8 1130 aaKnown RBP7.09□□□□□ -1.27
R3HDM1-201ENST00000264160 GPATCH8Q9UKJ3 1502 aaKnown RBP7.09□□□□□ -1.27
R3HDM1-201ENST00000264160 RRP7BPQ9NSQ0 103 aa7.08□□□□□ -1.28
R3HDM1-201ENST00000264160 CAMSAP2Q08AD1 1489 aa7.08□□□□□ -1.28
R3HDM1-201ENST00000264160 KDM6BO15054 1643 aa7.08□□□□□ -1.28
R3HDM1-201ENST00000264160 MAPKBP1O60336 1514 aa7.08□□□□□ -1.28
R3HDM1-201ENST00000264160 ABCC10Q5T3U5 1492 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms