RNA–Protein interactions for RNA: ENST00000263733.4

FAM20B-201, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM20B, Length 5,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-201ENST00000263733 MTUS2Q5JR59 1369 aa25.91■■□□□ 1.74
FAM20B-201ENST00000263733 SIN3AQ96ST3 1273 aa25.88■■□□□ 1.73
FAM20B-201ENST00000263733 LAS1LQ9Y4W2 734 aaKnown RBP25.86■■□□□ 1.73
FAM20B-201ENST00000263733 DDRGK1Q96HY6 314 aa25.83■■□□□ 1.73
FAM20B-201ENST00000263733 RSF1Q96T23 1441 aaPredicted RBP25.83■■□□□ 1.72
FAM20B-201ENST00000263733 GOLGA3Q08378 1498 aa25.83■■□□□ 1.72
FAM20B-201ENST00000263733 B4GALNT3Q6L9W6 998 aa25.8■■□□□ 1.72
FAM20B-201ENST00000263733 PPP4R2Q9NY27 417 aa25.79■■□□□ 1.72
FAM20B-201ENST00000263733 NOP58Q9Y2X3 529 aaKnown RBP25.77■■□□□ 1.72
FAM20B-201ENST00000263733 RBM19Q9Y4C8 960 aaKnown RBP25.73■■□□□ 1.71
FAM20B-201ENST00000263733 TNIKQ9UKE5 1360 aa25.72■■□□□ 1.71
FAM20B-201ENST00000263733 BECN1Q14457 450 aa25.71■■□□□ 1.71
FAM20B-201ENST00000263733 TSPY4P0CV99 314 aa25.7■■□□□ 1.71
FAM20B-201ENST00000263733 TSPY10P0CW01 314 aa25.7■■□□□ 1.71
FAM20B-201ENST00000263733 PPM1GO15355 546 aaPredicted RBP25.66■■□□□ 1.7
FAM20B-201ENST00000263733 TRIM44Q96DX7 344 aaPredicted RBP25.66■■□□□ 1.7
FAM20B-201ENST00000263733 EEA1Q15075 1411 aa25.66■■□□□ 1.7
FAM20B-201ENST00000263733 RGL3Q3MIN7 710 aa25.63■■□□□ 1.69
FAM20B-201ENST00000263733 STAG3Q9UJ98 1225 aa25.63■■□□□ 1.69
FAM20B-201ENST00000263733 DEKP35659 375 aaKnown RBP25.63■■□□□ 1.69
FAM20B-201ENST00000263733 RGS3P49796 1198 aa25.6■■□□□ 1.69
FAM20B-201ENST00000263733 SENP3Q9H4L4 574 aaPredicted RBP25.59■■□□□ 1.69
FAM20B-201ENST00000263733 TSHZ2Q9NRE2 1034 aa25.54■■□□□ 1.68
FAM20B-201ENST00000263733 WRNQ14191 1432 aaPredicted RBP eCLIP25.54■■□□□ 1.68
FAM20B-201ENST00000263733 NCLP19338 710 aaKnown RBP25.53■■□□□ 1.68
FAM20B-201ENST00000263733 MYH16Q9H6N6 1097 aa25.52■■□□□ 1.68
FAM20B-201ENST00000263733 CARD11Q9BXL7 1154 aa25.52■■□□□ 1.68
FAM20B-201ENST00000263733 ERICH6BQ5W0A0 696 aa25.51■■□□□ 1.68
FAM20B-201ENST00000263733 NAP1L5Q96NT1 182 aaPredicted RBP25.5■■□□□ 1.67
FAM20B-201ENST00000263733 CEP164Q9UPV0 1460 aa25.48■■□□□ 1.67
FAM20B-201ENST00000263733 NEUROD2Q15784 382 aa25.48■■□□□ 1.67
FAM20B-201ENST00000263733 PLPPR3Q6T4P5 718 aa25.46■■□□□ 1.67
FAM20B-201ENST00000263733 GOLGA6L22H0YM25 854 aa25.45■■□□□ 1.66
FAM20B-201ENST00000263733 KNSTRNQ9Y448 316 aa25.43■■□□□ 1.66
FAM20B-201ENST00000263733 TPRNQ4KMQ1 711 aa25.42■■□□□ 1.66
FAM20B-201ENST00000263733 ESF1Q9H501 851 aaKnown RBP25.42■■□□□ 1.66
FAM20B-201ENST00000263733 CCNB3Q8WWL7 1395 aa25.41■■□□□ 1.66
FAM20B-201ENST00000263733 CCER2I3L3R5 266 aa25.4■■□□□ 1.66
FAM20B-201ENST00000263733 CC2D1BQ5T0F9 858 aaKnown RBP25.39■■□□□ 1.66
FAM20B-201ENST00000263733 FRAT1Q92837 279 aaPredicted RBP25.39■■□□□ 1.65
FAM20B-201ENST00000263733 SOGA1O94964 1423 aa25.39■■□□□ 1.65
FAM20B-201ENST00000263733 FTSJ3Q8IY81 847 aaKnown RBP25.35■■□□□ 1.65
FAM20B-201ENST00000263733 PTMAP06454 111 aaKnown RBP25.35■■□□□ 1.65
FAM20B-201ENST00000263733 DNTTIP2Q5QJE6 756 aaKnown RBP25.31■■□□□ 1.64
FAM20B-201ENST00000263733 CFDP1Q9UEE9 299 aaPredicted RBP25.3■■□□□ 1.64
FAM20B-201ENST00000263733 HSPA5P11021 654 aaKnown RBP25.29■■□□□ 1.64
FAM20B-201ENST00000263733 CHMP7Q8WUX9 453 aaPredicted RBP25.28■■□□□ 1.64
FAM20B-201ENST00000263733 KIF27Q86VH2 1401 aa25.27■■□□□ 1.64
FAM20B-201ENST00000263733 KANK4Q5T7N3 995 aaPredicted RBP25.27■■□□□ 1.64
FAM20B-201ENST00000263733 KCNH8Q96L42 1107 aa25.27■■□□□ 1.64
FAM20B-201ENST00000263733 TNNT2P45379 298 aaPredicted RBP25.27■■□□□ 1.64
FAM20B-201ENST00000263733 RB1CC1Q8TDY2 1594 aa25.27■■□□□ 1.64
FAM20B-201ENST00000263733 SPRYD3Q8NCJ5 442 aa25.25■■□□□ 1.63
FAM20B-201ENST00000263733 CFAP53Q96M91 514 aa25.25■■□□□ 1.63
FAM20B-201ENST00000263733 PLEKHD1A6NEE1 506 aa25.23■■□□□ 1.63
FAM20B-201ENST00000263733 NPM1P06748 294 aaKnown RBP eCLIP25.21■■□□□ 1.63
FAM20B-201ENST00000263733 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.21■■□□□ 1.63
FAM20B-201ENST00000263733 CDCA8Q53HL2 280 aa25.2■■□□□ 1.62
FAM20B-201ENST00000263733 PLEKHG5O94827 1062 aa25.19■■□□□ 1.62
FAM20B-201ENST00000263733 TIMELESSQ9UNS1 1208 aa25.19■■□□□ 1.62
FAM20B-201ENST00000263733 HSP90AB1P08238 724 aaKnown RBP25.18■■□□□ 1.62
FAM20B-201ENST00000263733 SETD5Q9C0A6 1442 aa25.18■■□□□ 1.62
FAM20B-201ENST00000263733 PLCB2Q00722 1185 aa25.17■■□□□ 1.62
FAM20B-201ENST00000263733 FOXD1Q16676 465 aa25.16■■□□□ 1.62
FAM20B-201ENST00000263733 ARID4BQ4LE39 1312 aaPredicted RBP25.16■■□□□ 1.62
FAM20B-201ENST00000263733 CECR2Q9BXF3 1484 aa25.15■■□□□ 1.62
FAM20B-201ENST00000263733 DCAF11Q8TEB1 546 aa25.15■■□□□ 1.62
FAM20B-201ENST00000263733 VPS8Q8N3P4 1428 aa25.14■■□□□ 1.61
FAM20B-201ENST00000263733 ZBTB7CA1YPR0 619 aa25.12■■□□□ 1.61
FAM20B-201ENST00000263733 CASC1Q6TDU7 716 aa25.11■■□□□ 1.61
FAM20B-201ENST00000263733 RAB3GAP2Q9H2M9 1393 aa25.1■■□□□ 1.61
FAM20B-201ENST00000263733 MAPK8IP3Q9UPT6 1336 aa25.1■■□□□ 1.61
FAM20B-201ENST00000263733 RCAN3Q9UKA8 241 aa25.06■■□□□ 1.6
FAM20B-201ENST00000263733 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
FAM20B-201ENST00000263733 HSCBQ8IWL3 235 aa25.05■■□□□ 1.6
FAM20B-201ENST00000263733 L1TD1Q5T7N2 865 aaKnown RBP25.05■■□□□ 1.6
FAM20B-201ENST00000263733 SLKQ9H2G2 1235 aaPredicted RBP25.05■■□□□ 1.6
FAM20B-201ENST00000263733 U2SURPO15042 1029 aaKnown RBP25.04■■□□□ 1.6
FAM20B-201ENST00000263733 IPO9Q96P70 1041 aaKnown RBP25.04■■□□□ 1.6
FAM20B-201ENST00000263733 ABCC8Q09428 1581 aa25.04■■□□□ 1.6
FAM20B-201ENST00000263733 GZF1Q9H116 711 aaPredicted RBP25.03■■□□□ 1.6
FAM20B-201ENST00000263733 C14orf37Q86TY3 774 aa25.03■■□□□ 1.6
FAM20B-201ENST00000263733 PPP1R15AO75807 674 aaPredicted RBP25.01■■□□□ 1.59
FAM20B-201ENST00000263733 TMF1P82094 1093 aa25.01■■□□□ 1.59
FAM20B-201ENST00000263733 CCDC88BA6NC98 1476 aa25.01■■□□□ 1.59
FAM20B-201ENST00000263733 NUDCQ9Y266 331 aa25■■□□□ 1.59
FAM20B-201ENST00000263733 TCERG1O14776 1098 aaKnown RBP24.99■■□□□ 1.59
FAM20B-201ENST00000263733 FHAD1B1AJZ9 1412 aa24.98■■□□□ 1.59
FAM20B-201ENST00000263733 ZRSR1Q15695 479 aaKnown RBP24.97■■□□□ 1.59
FAM20B-201ENST00000263733 MSNP26038 577 aaKnown RBP24.95■■□□□ 1.58
FAM20B-201ENST00000263733 CARMIL1Q5VZK9 1371 aa24.92■■□□□ 1.58
FAM20B-201ENST00000263733 TAOK2Q9UL54 1235 aa24.92■■□□□ 1.58
FAM20B-201ENST00000263733 MS4A1P11836 297 aa24.91■■□□□ 1.58
FAM20B-201ENST00000263733 PKD2Q13563 968 aa24.89■■□□□ 1.58
FAM20B-201ENST00000263733 ARHGAP35Q9NRY4 1499 aa24.89■■□□□ 1.58
FAM20B-201ENST00000263733 KTN1Q86UP2 1357 aaKnown RBP24.89■■□□□ 1.57
FAM20B-201ENST00000263733 ARID3AQ99856 593 aa24.88■■□□□ 1.57
FAM20B-201ENST00000263733 A0A0G2JS52 829 aa24.87■■□□□ 1.57
FAM20B-201ENST00000263733 BAZ1AQ9NRL2 1556 aaPredicted RBP24.87■■□□□ 1.57
FAM20B-201ENST00000263733 MPHOSPH9Q99550 1183 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms