RNA–Protein interactions for RNA: ENST00000263401.9

COMMD9-201, Transcript of COMM domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD9, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-201ENST00000263401 CUL7Q14999 1698 aa15.62■□□□□ 0.09
COMMD9-201ENST00000263401 TIAM1Q13009 1591 aa15.62■□□□□ 0.09
COMMD9-201ENST00000263401 CTTNBP2Q8WZ74 1663 aa15.6■□□□□ 0.09
COMMD9-201ENST00000263401 AQRO60306 1485 aaKnown RBP eCLIP15.6■□□□□ 0.09
COMMD9-201ENST00000263401 RRBP1Q9P2E9 1410 aaKnown RBP15.6■□□□□ 0.09
COMMD9-201ENST00000263401 CCNB3Q8WWL7 1395 aa15.59■□□□□ 0.09
COMMD9-201ENST00000263401 TARBP1Q13395 1621 aaKnown RBP15.58■□□□□ 0.09
COMMD9-201ENST00000263401 PHLDB1Q86UU1 1377 aa15.57■□□□□ 0.08
COMMD9-201ENST00000263401 LRRC9Q6ZRR7 1453 aa15.57■□□□□ 0.08
COMMD9-201ENST00000263401 DIEXFQ68CQ4 756 aaKnown RBP15.55■□□□□ 0.08
COMMD9-201ENST00000263401 FAM50AQ14320 339 aaKnown RBP15.54■□□□□ 0.08
COMMD9-201ENST00000263401 FHAD1B1AJZ9 1412 aa15.54■□□□□ 0.08
COMMD9-201ENST00000263401 DHX57Q6P158 1386 aaKnown RBP15.53■□□□□ 0.08
COMMD9-201ENST00000263401 MRC2Q9UBG0 1479 aa15.51■□□□□ 0.07
COMMD9-201ENST00000263401 ZNF608Q9ULD9 1512 aaPredicted RBP15.51■□□□□ 0.07
COMMD9-201ENST00000263401 CFAP43Q8NDM7 1665 aa15.51■□□□□ 0.07
COMMD9-201ENST00000263401 PBRM1Q86U86 1689 aa15.5■□□□□ 0.07
COMMD9-201ENST00000263401 EFCAB5A4FU69 1503 aa15.49■□□□□ 0.07
COMMD9-201ENST00000263401 ARID3CA6NKF2 412 aa15.49■□□□□ 0.07
COMMD9-201ENST00000263401 ZNF316A6NFI3 1004 aaPredicted RBP15.49■□□□□ 0.07
COMMD9-201ENST00000263401 CASKIN1Q8WXD9 1431 aa15.47■□□□□ 0.07
COMMD9-201ENST00000263401 MAP3K1Q13233 1512 aa15.47■□□□□ 0.07
COMMD9-201ENST00000263401 FYCO1Q9BQS8 1478 aa15.47■□□□□ 0.07
COMMD9-201ENST00000263401 LRRIQ1Q96JM4 1722 aa15.46■□□□□ 0.07
COMMD9-201ENST00000263401 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.06
COMMD9-201ENST00000263401 RAB3GAP2Q9H2M9 1393 aa15.44■□□□□ 0.06
COMMD9-201ENST00000263401 SAMD9Q5K651 1589 aa15.44■□□□□ 0.06
COMMD9-201ENST00000263401 FMN1Q68DA7 1419 aa15.43■□□□□ 0.06
COMMD9-201ENST00000263401 ERCC6Q03468 1493 aa15.42■□□□□ 0.06
COMMD9-201ENST00000263401 ADAMTS12P58397 1594 aa15.41■□□□□ 0.06
COMMD9-201ENST00000263401 MTUS2Q5JR59 1369 aa15.4■□□□□ 0.06
COMMD9-201ENST00000263401 GRIN2BQ13224 1484 aa15.39■□□□□ 0.05
COMMD9-201ENST00000263401 WDR62O43379 1518 aa15.38■□□□□ 0.05
COMMD9-201ENST00000263401 IFT140Q96RY7 1462 aa15.36■□□□□ 0.05
COMMD9-201ENST00000263401 IQGAP2Q13576 1575 aa15.36■□□□□ 0.05
COMMD9-201ENST00000263401 SETD5Q9C0A6 1442 aa15.35■□□□□ 0.05
COMMD9-201ENST00000263401 SCAF1Q9H7N4 1312 aaKnown RBP15.35■□□□□ 0.05
COMMD9-201ENST00000263401 FBLN2P98095 1184 aa15.34■□□□□ 0.05
COMMD9-201ENST00000263401 MAGI3Q5TCQ9 1506 aa15.34■□□□□ 0.05
COMMD9-201ENST00000263401 EIF4G3O43432 1585 aaKnown RBP15.33■□□□□ 0.05
COMMD9-201ENST00000263401 FGD6Q6ZV73 1430 aa15.32■□□□□ 0.04
COMMD9-201ENST00000263401 MAPKBP1O60336 1514 aa15.32■□□□□ 0.04
COMMD9-201ENST00000263401 SIN3AQ96ST3 1273 aa15.32■□□□□ 0.04
COMMD9-201ENST00000263401 CDK13Q14004 1512 aaKnown RBP15.31■□□□□ 0.04
COMMD9-201ENST00000263401 MIER1Q8N108 512 aa15.31■□□□□ 0.04
COMMD9-201ENST00000263401 NCOA2Q15596 1464 aa15.31■□□□□ 0.04
COMMD9-201ENST00000263401 NEUROD1Q13562 356 aa15.31■□□□□ 0.04
COMMD9-201ENST00000263401 PELP1Q8IZL8 1130 aaKnown RBP15.3■□□□□ 0.04
COMMD9-201ENST00000263401 PTPRKQ15262 1439 aa15.3■□□□□ 0.04
COMMD9-201ENST00000263401 YTHDC1Q96MU7 727 aaKnown RBP15.3■□□□□ 0.04
COMMD9-201ENST00000263401 CLSPNQ9HAW4 1339 aa15.3■□□□□ 0.04
COMMD9-201ENST00000263401 THOC2Q8NI27 1593 aaKnown RBP15.29■□□□□ 0.04
COMMD9-201ENST00000263401 CHIC2Q9UKJ5 165 aa15.26■□□□□ 0.03
COMMD9-201ENST00000263401 CHMP7Q8WUX9 453 aaPredicted RBP15.25■□□□□ 0.03
COMMD9-201ENST00000263401 GRIN2AQ12879 1464 aa15.25■□□□□ 0.03
COMMD9-201ENST00000263401 SUPT6HQ7KZ85 1726 aaKnown RBP15.24■□□□□ 0.03
COMMD9-201ENST00000263401 EPRSP07814 1512 aaKnown RBP15.24■□□□□ 0.03
COMMD9-201ENST00000263401 MYOM3Q5VTT5 1437 aa15.24■□□□□ 0.03
COMMD9-201ENST00000263401 DISP1Q96F81 1524 aa15.23■□□□□ 0.03
COMMD9-201ENST00000263401 EHBP1L1Q8N3D4 1523 aa15.23■□□□□ 0.03
COMMD9-201ENST00000263401 HECW1Q76N89 1606 aa15.22■□□□□ 0.03
COMMD9-201ENST00000263401 RRP7BPQ9NSQ0 103 aa15.21■□□□□ 0.03
COMMD9-201ENST00000263401 UGGT2Q9NYU1 1516 aa15.21■□□□□ 0.03
COMMD9-201ENST00000263401 KIAA0586Q9BVV6 1533 aa15.21■□□□□ 0.02
COMMD9-201ENST00000263401 KIAA0556O60303 1618 aa15.2■□□□□ 0.02
COMMD9-201ENST00000263401 CEP170Q5SW79 1584 aa15.2■□□□□ 0.02
COMMD9-201ENST00000263401 ACIN1Q9UKV3 1341 aaKnown RBP15.19■□□□□ 0.02
COMMD9-201ENST00000263401 PTPN23Q9H3S7 1636 aa15.19■□□□□ 0.02
COMMD9-201ENST00000263401 CCDC18Q5T9S5 1454 aa15.19■□□□□ 0.02
COMMD9-201ENST00000263401 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.17■□□□□ 0.02
COMMD9-201ENST00000263401 ARHGEF11O15085 1522 aa15.16■□□□□ 0.02
COMMD9-201ENST00000263401 HIRIP3Q9BW71 556 aaPredicted RBP15.16■□□□□ 0.02
COMMD9-201ENST00000263401 NUP153P49790 1475 aaKnown RBP15.15■□□□□ 0.02
COMMD9-201ENST00000263401 SYNJ2O15056 1496 aa15.14■□□□□ 0.01
COMMD9-201ENST00000263401 ZNF644Q9H582 1327 aaPredicted RBP15.14■□□□□ 0.01
COMMD9-201ENST00000263401 NAIPQ13075 1403 aa15.14■□□□□ 0.01
COMMD9-201ENST00000263401 MAGI1Q96QZ7 1491 aaPredicted RBP15.14■□□□□ 0.01
COMMD9-201ENST00000263401 PLB1Q6P1J6 1458 aa15.14■□□□□ 0.01
COMMD9-201ENST00000263401 HFM1A2PYH4 1435 aa15.13■□□□□ 0.01
COMMD9-201ENST00000263401 KDM6BO15054 1643 aa15.11■□□□□ 0.01
COMMD9-201ENST00000263401 JPH4Q96JJ6 628 aa15.11■□□□□ 0.01
COMMD9-201ENST00000263401 RAPGEF6Q8TEU7 1601 aa15.11■□□□□ 0.01
COMMD9-201ENST00000263401 PRG4Q92954 1404 aaPredicted RBP15.1■□□□□ 0.01
COMMD9-201ENST00000263401 CENPBP07199 599 aaPredicted RBP15.09■□□□□ 0.01
COMMD9-201ENST00000263401 TRIM52Q96A61 297 aa15.08■□□□□ 0
COMMD9-201ENST00000263401 FOXD1Q16676 465 aa15.07■□□□□ 0
COMMD9-201ENST00000263401 GTF3C3Q9Y5Q9 886 aa15.07■□□□□ 0
COMMD9-201ENST00000263401 TCOF1Q13428 1488 aaKnown RBP15.06■□□□□ 0
COMMD9-201ENST00000263401 UACAQ9BZF9 1416 aa15.06■□□□□ 0
COMMD9-201ENST00000263401 ZNF777Q9ULD5 760 aaPredicted RBP15.05■□□□□ 0
COMMD9-201ENST00000263401 NUP160Q12769 1436 aa15.05■□□□□ -0
COMMD9-201ENST00000263401 KIF14Q15058 1648 aa15.03■□□□□ -0
COMMD9-201ENST00000263401 PPP1R15AO75807 674 aaPredicted RBP15.03■□□□□ -0
COMMD9-201ENST00000263401 TONSLQ96HA7 1378 aa15.01□□□□□ -0.01
COMMD9-201ENST00000263401 DDX10Q13206 875 aaKnown RBP15□□□□□ -0.01
COMMD9-201ENST00000263401 KCNH8Q96L42 1107 aa15□□□□□ -0.01
COMMD9-201ENST00000263401 DENND4BO75064 1496 aaPredicted RBP15□□□□□ -0.01
COMMD9-201ENST00000263401 MIA2Q96PC5 1412 aa15□□□□□ -0.01
COMMD9-201ENST00000263401 CARMIL2Q6F5E8 1435 aa15□□□□□ -0.01
COMMD9-201ENST00000263401 CDK11AQ9UQ88 783 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms