RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 CUX1P39880 1505 aa19.72■□□□□ 0.75
TUBGCP3-201ENST00000261965 CARMIL1Q5VZK9 1371 aa19.71■□□□□ 0.75
TUBGCP3-201ENST00000261965 ARHGAP35Q9NRY4 1499 aa19.7■□□□□ 0.74
TUBGCP3-201ENST00000261965 PEG3Q9GZU2 1588 aa19.69■□□□□ 0.74
TUBGCP3-201ENST00000261965 CHIC2Q9UKJ5 165 aa19.69■□□□□ 0.74
TUBGCP3-201ENST00000261965 ANP32EQ9BTT0 268 aa19.67■□□□□ 0.74
TUBGCP3-201ENST00000261965 IGF1RP08069 1367 aa19.66■□□□□ 0.74
TUBGCP3-201ENST00000261965 HNRNPUQ00839 825 aaKnown RBP eCLIP19.65■□□□□ 0.74
TUBGCP3-201ENST00000261965 TSHZ2Q9NRE2 1034 aa19.65■□□□□ 0.74
TUBGCP3-201ENST00000261965 PHLDB1Q86UU1 1377 aa19.64■□□□□ 0.73
TUBGCP3-201ENST00000261965 SETD5Q9C0A6 1442 aa19.62■□□□□ 0.73
TUBGCP3-201ENST00000261965 RRBP1Q9P2E9 1410 aaKnown RBP19.62■□□□□ 0.73
TUBGCP3-201ENST00000261965 FHOD3Q2V2M9 1422 aa19.6■□□□□ 0.73
TUBGCP3-201ENST00000261965 NBR1Q14596 966 aa19.6■□□□□ 0.73
TUBGCP3-201ENST00000261965 CDK11AQ9UQ88 783 aaPredicted RBP19.6■□□□□ 0.73
TUBGCP3-201ENST00000261965 RRP7BPQ9NSQ0 103 aa19.59■□□□□ 0.73
TUBGCP3-201ENST00000261965 BCL11AQ9H165 835 aa19.58■□□□□ 0.73
TUBGCP3-201ENST00000261965 ZNF326Q5BKZ1 582 aaKnown RBP19.57■□□□□ 0.72
TUBGCP3-201ENST00000261965 TONSLQ96HA7 1378 aa19.57■□□□□ 0.72
TUBGCP3-201ENST00000261965 ERICH3Q5RHP9 1530 aa19.57■□□□□ 0.72
TUBGCP3-201ENST00000261965 FAM9BQ8IZU0 186 aa19.55■□□□□ 0.72
TUBGCP3-201ENST00000261965 NCAPD3P42695 1498 aa19.52■□□□□ 0.71
TUBGCP3-201ENST00000261965 MTUS2Q5JR59 1369 aa19.51■□□□□ 0.71
TUBGCP3-201ENST00000261965 PPP1R15AO75807 674 aaPredicted RBP19.5■□□□□ 0.71
TUBGCP3-201ENST00000261965 CFTRP13569 1480 aa19.49■□□□□ 0.71
TUBGCP3-201ENST00000261965 FGD5Q6ZNL6 1462 aa19.49■□□□□ 0.71
TUBGCP3-201ENST00000261965 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
TUBGCP3-201ENST00000261965 NPM2Q86SE8 214 aaKnown RBP19.48■□□□□ 0.71
TUBGCP3-201ENST00000261965 WDR97A6NE52 1622 aa19.47■□□□□ 0.71
TUBGCP3-201ENST00000261965 FOXD1Q16676 465 aa19.47■□□□□ 0.71
TUBGCP3-201ENST00000261965 CADPSQ9ULU8 1353 aa19.47■□□□□ 0.71
TUBGCP3-201ENST00000261965 SALL2Q9Y467 1007 aaPredicted RBP19.46■□□□□ 0.71
TUBGCP3-201ENST00000261965 BIVM-ERCC5R4GMW8 1640 aa19.46■□□□□ 0.71
TUBGCP3-201ENST00000261965 LRRC9Q6ZRR7 1453 aa19.45■□□□□ 0.7
TUBGCP3-201ENST00000261965 RBM19Q9Y4C8 960 aaKnown RBP19.45■□□□□ 0.7
TUBGCP3-201ENST00000261965 TDRD9Q8NDG6 1382 aaKnown RBP19.43■□□□□ 0.7
TUBGCP3-201ENST00000261965 MAPKBP1O60336 1514 aa19.41■□□□□ 0.7
TUBGCP3-201ENST00000261965 FHAD1B1AJZ9 1412 aa19.4■□□□□ 0.7
TUBGCP3-201ENST00000261965 RTL5Q5HYW3 569 aaPredicted RBP19.38■□□□□ 0.69
TUBGCP3-201ENST00000261965 TIAM1Q13009 1591 aa19.37■□□□□ 0.69
TUBGCP3-201ENST00000261965 B4GALNT3Q6L9W6 998 aa19.31■□□□□ 0.68
TUBGCP3-201ENST00000261965 NESP48681 1621 aa19.31■□□□□ 0.68
TUBGCP3-201ENST00000261965 HMGXB3Q12766 1538 aa19.31■□□□□ 0.68
TUBGCP3-201ENST00000261965 FANCD2Q9BXW9 1451 aa19.3■□□□□ 0.68
TUBGCP3-201ENST00000261965 HSPA5P11021 654 aaKnown RBP19.3■□□□□ 0.68
TUBGCP3-201ENST00000261965 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
TUBGCP3-201ENST00000261965 RTN4Q9NQC3 1192 aaKnown RBP19.27■□□□□ 0.68
TUBGCP3-201ENST00000261965 ZNF777Q9ULD5 760 aaPredicted RBP19.27■□□□□ 0.68
TUBGCP3-201ENST00000261965 PCF11O94913 1555 aaKnown RBP19.26■□□□□ 0.67
TUBGCP3-201ENST00000261965 CCER2I3L3R5 266 aa19.24■□□□□ 0.67
TUBGCP3-201ENST00000261965 CCDC184Q52MB2 194 aa19.24■□□□□ 0.67
TUBGCP3-201ENST00000261965 MRS2Q9HD23 443 aa19.24■□□□□ 0.67
TUBGCP3-201ENST00000261965 CCDC18Q5T9S5 1454 aa19.23■□□□□ 0.67
TUBGCP3-201ENST00000261965 EIF4G2P78344 907 aaKnown RBP eCLIP19.22■□□□□ 0.671e-6■■■■■ 30.5
TUBGCP3-201ENST00000261965 FGD6Q6ZV73 1430 aa19.22■□□□□ 0.67
TUBGCP3-201ENST00000261965 TIMELESSQ9UNS1 1208 aa19.21■□□□□ 0.67
TUBGCP3-201ENST00000261965 PTPRKQ15262 1439 aa19.2■□□□□ 0.66
TUBGCP3-201ENST00000261965 FBLN2P98095 1184 aa19.19■□□□□ 0.66
TUBGCP3-201ENST00000261965 L3MBTL2Q969R5 705 aa19.19■□□□□ 0.66
TUBGCP3-201ENST00000261965 DAXXQ9UER7 740 aaPredicted RBP19.18■□□□□ 0.66
TUBGCP3-201ENST00000261965 POLA1P09884 1462 aaPredicted RBP19.16■□□□□ 0.66
TUBGCP3-201ENST00000261965 WASHC2AQ641Q2 1341 aa19.16■□□□□ 0.66
TUBGCP3-201ENST00000261965 SLC4A1APQ9BWU0 796 aaKnown RBP19.15■□□□□ 0.66
TUBGCP3-201ENST00000261965 MPHOSPH9Q99550 1183 aa19.15■□□□□ 0.66
TUBGCP3-201ENST00000261965 FMN1Q68DA7 1419 aa19.14■□□□□ 0.66
TUBGCP3-201ENST00000261965 CCDC136Q96JN2 1154 aa19.14■□□□□ 0.65
TUBGCP3-201ENST00000261965 CASKIN1Q8WXD9 1431 aa19.14■□□□□ 0.65
TUBGCP3-201ENST00000261965 AQRO60306 1485 aaKnown RBP eCLIP19.12■□□□□ 0.654e-7■■■■■ 31
TUBGCP3-201ENST00000261965 ZNF644Q9H582 1327 aaPredicted RBP19.11■□□□□ 0.65
TUBGCP3-201ENST00000261965 C11orf95C9JLR9 678 aaPredicted RBP19.11■□□□□ 0.65
TUBGCP3-201ENST00000261965 ANP32AP39687 249 aaKnown RBP19.11■□□□□ 0.65
TUBGCP3-201ENST00000261965 EIF5BO60841 1220 aaKnown RBP19.09■□□□□ 0.65
TUBGCP3-201ENST00000261965 NCOA2Q15596 1464 aa19.09■□□□□ 0.65
TUBGCP3-201ENST00000261965 TOPBP1Q92547 1522 aa19.08■□□□□ 0.65
TUBGCP3-201ENST00000261965 UACAQ9BZF9 1416 aa19.07■□□□□ 0.64
TUBGCP3-201ENST00000261965 KDM2AQ9Y2K7 1162 aa19.07■□□□□ 0.64
TUBGCP3-201ENST00000261965 FYCO1Q9BQS8 1478 aa19.07■□□□□ 0.64
TUBGCP3-201ENST00000261965 NAIPQ13075 1403 aa19.06■□□□□ 0.64
TUBGCP3-201ENST00000261965 CC2D2AQ9P2K1 1620 aa19.06■□□□□ 0.64
TUBGCP3-201ENST00000261965 MYOM3Q5VTT5 1437 aa19.04■□□□□ 0.64
TUBGCP3-201ENST00000261965 LAS1LQ9Y4W2 734 aaKnown RBP19.04■□□□□ 0.64
TUBGCP3-201ENST00000261965 DEKP35659 375 aaKnown RBP19.03■□□□□ 0.64
TUBGCP3-201ENST00000261965 MAP3K1Q13233 1512 aa19.03■□□□□ 0.64
TUBGCP3-201ENST00000261965 NBPF8Q3BBV2 869 aa19.03■□□□□ 0.64
TUBGCP3-201ENST00000261965 ARXQ96QS3 562 aa19.03■□□□□ 0.64
TUBGCP3-201ENST00000261965 HFM1A2PYH4 1435 aa19.02■□□□□ 0.63
TUBGCP3-201ENST00000261965 ZBTB47Q9UFB7 747 aaPredicted RBP19.01■□□□□ 0.63
TUBGCP3-201ENST00000261965 MSH5O43196 834 aa19■□□□□ 0.63
TUBGCP3-201ENST00000261965 PRKRIP1Q9H875 184 aaPredicted RBP18.99■□□□□ 0.63
TUBGCP3-201ENST00000261965 GAPVD1Q14C86 1478 aa18.99■□□□□ 0.63
TUBGCP3-201ENST00000261965 ABCA10Q8WWZ4 1543 aa18.97■□□□□ 0.63
TUBGCP3-201ENST00000261965 TMC1Q8TDI8 760 aa18.94■□□□□ 0.62
TUBGCP3-201ENST00000261965 CFDP1Q9UEE9 299 aaPredicted RBP18.94■□□□□ 0.62
TUBGCP3-201ENST00000261965 PPP4R2Q9NY27 417 aa18.93■□□□□ 0.62
TUBGCP3-201ENST00000261965 DNMBPQ6XZF7 1577 aa18.92■□□□□ 0.62
TUBGCP3-201ENST00000261965 PTPN23Q9H3S7 1636 aa18.91■□□□□ 0.62
TUBGCP3-201ENST00000261965 PDS5BQ9NTI5 1447 aa18.91■□□□□ 0.62
TUBGCP3-201ENST00000261965 CDK13Q14004 1512 aaKnown RBP18.9■□□□□ 0.62
TUBGCP3-201ENST00000261965 CFAP43Q8NDM7 1665 aa18.9■□□□□ 0.62
TUBGCP3-201ENST00000261965 EFCAB5A4FU69 1503 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms