RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.32□□□□□ -0.12
SLC6A4-201ENST00000261707 DEKP35659 375 aaKnown RBP14.31□□□□□ -0.12
SLC6A4-201ENST00000261707 SALL2Q9Y467 1007 aaPredicted RBP14.3□□□□□ -0.12
SLC6A4-201ENST00000261707 NOP58Q9Y2X3 529 aaKnown RBP14.3□□□□□ -0.12
SLC6A4-201ENST00000261707 DNTTIP2Q5QJE6 756 aaKnown RBP14.27□□□□□ -0.12
SLC6A4-201ENST00000261707 TULP1O00294 542 aaPredicted RBP14.26□□□□□ -0.13
SLC6A4-201ENST00000261707 LAS1LQ9Y4W2 734 aaKnown RBP14.26□□□□□ -0.13
SLC6A4-201ENST00000261707 TONSLQ96HA7 1378 aa14.26□□□□□ -0.13
SLC6A4-201ENST00000261707 PTMAP06454 111 aaKnown RBP14.25□□□□□ -0.13
SLC6A4-201ENST00000261707 GOLGA6L22H0YM25 854 aa14.24□□□□□ -0.13
SLC6A4-201ENST00000261707 NCLP19338 710 aaKnown RBP14.22□□□□□ -0.13
SLC6A4-201ENST00000261707 TMC1Q8TDI8 760 aa14.22□□□□□ -0.13
SLC6A4-201ENST00000261707 AMER1Q5JTC6 1135 aaPredicted RBP14.22□□□□□ -0.13
SLC6A4-201ENST00000261707 MRS2Q9HD23 443 aa14.21□□□□□ -0.13
SLC6A4-201ENST00000261707 PPP1R15AO75807 674 aaPredicted RBP14.21□□□□□ -0.13
SLC6A4-201ENST00000261707 SUPT16HQ9Y5B9 1047 aaKnown RBP14.2□□□□□ -0.14
SLC6A4-201ENST00000261707 P3H3Q8IVL6 736 aa14.19□□□□□ -0.14
SLC6A4-201ENST00000261707 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.19□□□□□ -0.14
SLC6A4-201ENST00000261707 NCBP3Q53F19 620 aaKnown RBP14.16□□□□□ -0.14
SLC6A4-201ENST00000261707 CSRNP3Q8WYN3 585 aa14.15□□□□□ -0.15
SLC6A4-201ENST00000261707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.15
SLC6A4-201ENST00000261707 LMOD2Q6P5Q4 547 aa14.11□□□□□ -0.15
SLC6A4-201ENST00000261707 WDR43Q15061 677 aaKnown RBP eCLIP14.11□□□□□ -0.15
SLC6A4-201ENST00000261707 PPP4R2Q9NY27 417 aa14.1□□□□□ -0.15
SLC6A4-201ENST00000261707 L1TD1Q5T7N2 865 aaKnown RBP14.09□□□□□ -0.15
SLC6A4-201ENST00000261707 RBM19Q9Y4C8 960 aaKnown RBP14.08□□□□□ -0.15
SLC6A4-201ENST00000261707 MYH16Q9H6N6 1097 aa14.06□□□□□ -0.16
SLC6A4-201ENST00000261707 MSNP26038 577 aaKnown RBP14.05□□□□□ -0.16
SLC6A4-201ENST00000261707 DCAF8L1A6NGE4 600 aa14.04□□□□□ -0.16
SLC6A4-201ENST00000261707 HIRIP3Q9BW71 556 aaPredicted RBP14.03□□□□□ -0.16
SLC6A4-201ENST00000261707 CHAF1AQ13111 956 aaPredicted RBP14.01□□□□□ -0.17
SLC6A4-201ENST00000261707 TPRNQ4KMQ1 711 aa14□□□□□ -0.17
SLC6A4-201ENST00000261707 CHMP7Q8WUX9 453 aaPredicted RBP14□□□□□ -0.17
SLC6A4-201ENST00000261707 PLCB2Q00722 1185 aa13.99□□□□□ -0.17
SLC6A4-201ENST00000261707 ZRSR1Q15695 479 aaKnown RBP13.99□□□□□ -0.17
SLC6A4-201ENST00000261707 KRI1Q8N9T8 703 aaKnown RBP13.99□□□□□ -0.17
SLC6A4-201ENST00000261707 CCDC180Q9P1Z9 1646 aa13.97□□□□□ -0.17
SLC6A4-201ENST00000261707 PHF23Q9BUL5 403 aaPredicted RBP13.96□□□□□ -0.17
SLC6A4-201ENST00000261707 B4GALNT3Q6L9W6 998 aa13.96□□□□□ -0.18
SLC6A4-201ENST00000261707 PNNQ9H307 717 aaKnown RBP13.95□□□□□ -0.18
SLC6A4-201ENST00000261707 ARID3AQ99856 593 aa13.95□□□□□ -0.18
SLC6A4-201ENST00000261707 KCNH8Q96L42 1107 aa13.95□□□□□ -0.18
SLC6A4-201ENST00000261707 GOLGA6L6A8MZA4 724 aa13.95□□□□□ -0.18
SLC6A4-201ENST00000261707 HSP90AB1P08238 724 aaKnown RBP13.93□□□□□ -0.18
SLC6A4-201ENST00000261707 CASC1Q6TDU7 716 aa13.93□□□□□ -0.18
SLC6A4-201ENST00000261707 CCDC9Q9Y3X0 531 aaKnown RBP13.93□□□□□ -0.18
SLC6A4-201ENST00000261707 TNNT3P45378 269 aaPredicted RBP13.92□□□□□ -0.18
SLC6A4-201ENST00000261707 RGS3P49796 1198 aa13.92□□□□□ -0.18
SLC6A4-201ENST00000261707 TSHZ2Q9NRE2 1034 aa13.92□□□□□ -0.18
SLC6A4-201ENST00000261707 CLSTN1O94985 981 aa13.92□□□□□ -0.18
SLC6A4-201ENST00000261707 EIF4G2P78344 907 aaKnown RBP eCLIP13.91□□□□□ -0.18
SLC6A4-201ENST00000261707 GOLGA2Q08379 1002 aa13.91□□□□□ -0.18
SLC6A4-201ENST00000261707 TMX4Q9H1E5 349 aaPredicted RBP13.9□□□□□ -0.18
SLC6A4-201ENST00000261707 VSIG10Q8N0Z9 540 aa13.9□□□□□ -0.19
SLC6A4-201ENST00000261707 HSP90AA2PQ14568 343 aaPredicted RBP13.89□□□□□ -0.19
SLC6A4-201ENST00000261707 SENP3-EIF4A1A0A087X0R7 540 aa13.89□□□□□ -0.19
SLC6A4-201ENST00000261707 RSPH6AQ9H0K4 717 aa13.88□□□□□ -0.19
SLC6A4-201ENST00000261707 NRDCO43847 1150 aa13.86□□□□□ -0.19
SLC6A4-201ENST00000261707 HSCBQ8IWL3 235 aa13.86□□□□□ -0.19
SLC6A4-201ENST00000261707 ISY1Q9ULR0 285 aaKnown RBP13.85□□□□□ -0.19
SLC6A4-201ENST00000261707 SPRYD3Q8NCJ5 442 aa13.83□□□□□ -0.2
SLC6A4-201ENST00000261707 FTSJ3Q8IY81 847 aaKnown RBP13.82□□□□□ -0.2
SLC6A4-201ENST00000261707 KDM2AQ9Y2K7 1162 aa13.82□□□□□ -0.2
SLC6A4-201ENST00000261707 MLECQ14165 292 aa13.81□□□□□ -0.2
SLC6A4-201ENST00000261707 DRC7Q8IY82 874 aa13.81□□□□□ -0.2
SLC6A4-201ENST00000261707 PRM3Q9NNZ6 103 aa13.8□□□□□ -0.2
SLC6A4-201ENST00000261707 TSPY4P0CV99 314 aa13.8□□□□□ -0.2
SLC6A4-201ENST00000261707 TSPY10P0CW01 314 aa13.8□□□□□ -0.2
SLC6A4-201ENST00000261707 CHIC2Q9UKJ5 165 aa13.8□□□□□ -0.2
SLC6A4-201ENST00000261707 GOLGA6L3A6NEY3 463 aa13.79□□□□□ -0.2
SLC6A4-201ENST00000261707 GZF1Q9H116 711 aaPredicted RBP13.79□□□□□ -0.2
SLC6A4-201ENST00000261707 KIAA2012Q0VF49 1180 aa13.79□□□□□ -0.2
SLC6A4-201ENST00000261707 TAOK2Q9UL54 1235 aa13.79□□□□□ -0.2
SLC6A4-201ENST00000261707 PTMSP20962 102 aa13.78□□□□□ -0.2
SLC6A4-201ENST00000261707 IPO9Q96P70 1041 aaKnown RBP13.77□□□□□ -0.2
SLC6A4-201ENST00000261707 MEX3CQ5U5Q3 659 aaKnown RBP13.77□□□□□ -0.21
SLC6A4-201ENST00000261707 ERCC6Q03468 1493 aa13.76□□□□□ -0.21
SLC6A4-201ENST00000261707 MYO15BQ96JP2 1530 aa13.75□□□□□ -0.21
SLC6A4-201ENST00000261707 G3V3G9 751 aa13.74□□□□□ -0.21
SLC6A4-201ENST00000261707 DCAF8Q5TAQ9 597 aa13.74□□□□□ -0.21
SLC6A4-201ENST00000261707 GBP4Q96PP9 640 aa13.74□□□□□ -0.21
SLC6A4-201ENST00000261707 GOLGA6L4A6NEF3 574 aa13.72□□□□□ -0.21
SLC6A4-201ENST00000261707 FRAT1Q92837 279 aaPredicted RBP13.72□□□□□ -0.21
SLC6A4-201ENST00000261707 SLKQ9H2G2 1235 aaPredicted RBP13.69□□□□□ -0.22
SLC6A4-201ENST00000261707 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
SLC6A4-201ENST00000261707 CCER2I3L3R5 266 aa13.68□□□□□ -0.22
SLC6A4-201ENST00000261707 TCERG1O14776 1098 aaKnown RBP13.68□□□□□ -0.22
SLC6A4-201ENST00000261707 TIMELESSQ9UNS1 1208 aa13.68□□□□□ -0.22
SLC6A4-201ENST00000261707 USP35Q9P2H5 1018 aa13.67□□□□□ -0.22
SLC6A4-201ENST00000261707 POGKQ9P215 609 aa13.66□□□□□ -0.22
SLC6A4-201ENST00000261707 CFAP53Q96M91 514 aa13.66□□□□□ -0.22
SLC6A4-201ENST00000261707 MSH5O43196 834 aa13.66□□□□□ -0.22
SLC6A4-201ENST00000261707 HDGFP51858 240 aaKnown RBP13.65□□□□□ -0.22
SLC6A4-201ENST00000261707 MS4A1P11836 297 aa13.64□□□□□ -0.23
SLC6A4-201ENST00000261707 KNSTRNQ9Y448 316 aa13.64□□□□□ -0.23
SLC6A4-201ENST00000261707 CHMP4BQ9H444 224 aaKnown RBP13.64□□□□□ -0.23
SLC6A4-201ENST00000261707 PKNOX2Q96KN3 472 aa13.64□□□□□ -0.23
SLC6A4-201ENST00000261707 GSE1Q14687 1217 aa13.64□□□□□ -0.23
SLC6A4-201ENST00000261707 NEUROD2Q15784 382 aa13.64□□□□□ -0.23
SLC6A4-201ENST00000261707 CSB-PGBD3P0DP91 1061 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms