RNA–Protein interactions for RNA: ENST00000261349.8

LRP6-201, Transcript of LDL receptor related protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP6, Length 10,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-201ENST00000261349 BRPF3Q9ULD4 1205 aa6.51□□□□□ -1.37
LRP6-201ENST00000261349 ARID4BQ4LE39 1312 aaPredicted RBP6.51□□□□□ -1.37
LRP6-201ENST00000261349 RSF1Q96T23 1441 aaPredicted RBP6.5□□□□□ -1.37
LRP6-201ENST00000261349 TNIKQ9UKE5 1360 aa6.5□□□□□ -1.37
LRP6-201ENST00000261349 DDRGK1Q96HY6 314 aa6.5□□□□□ -1.37
LRP6-201ENST00000261349 SENP3-EIF4A1A0A087X0R7 540 aa6.5□□□□□ -1.37
LRP6-201ENST00000261349 CCER2I3L3R5 266 aa6.49□□□□□ -1.37
LRP6-201ENST00000261349 GOLGA3Q08378 1498 aa6.49□□□□□ -1.37
LRP6-201ENST00000261349 SCRIBQ14160 1630 aa6.48□□□□□ -1.37
LRP6-201ENST00000261349 ABCC9O60706 1549 aa6.48□□□□□ -1.37
LRP6-201ENST00000261349 ZNF326Q5BKZ1 582 aaKnown RBP6.48□□□□□ -1.37
LRP6-201ENST00000261349 PODXL2Q9NZ53 605 aa6.47□□□□□ -1.37
LRP6-201ENST00000261349 WRNQ14191 1432 aaPredicted RBP eCLIP6.47□□□□□ -1.37
LRP6-201ENST00000261349 PAK3O75914 559 aaPredicted RBP6.47□□□□□ -1.37
LRP6-201ENST00000261349 HSP90AA1P07900 732 aaKnown RBP6.47□□□□□ -1.37
LRP6-201ENST00000261349 A0A0U1RQG5 324 aaPredicted RBP6.45□□□□□ -1.38
LRP6-201ENST00000261349 DHX57Q6P158 1386 aaKnown RBP6.45□□□□□ -1.38
LRP6-201ENST00000261349 HSP90AA2PQ14568 343 aaPredicted RBP6.44□□□□□ -1.38
LRP6-201ENST00000261349 SIN3AQ96ST3 1273 aa6.44□□□□□ -1.38
LRP6-201ENST00000261349 SLC4A1APQ9BWU0 796 aaKnown RBP6.43□□□□□ -1.38
LRP6-201ENST00000261349 EEA1Q15075 1411 aa6.43□□□□□ -1.38
LRP6-201ENST00000261349 GSE1Q14687 1217 aa6.43□□□□□ -1.38
LRP6-201ENST00000261349 PNNQ9H307 717 aaKnown RBP6.42□□□□□ -1.38
LRP6-201ENST00000261349 SOGA1O94964 1423 aa6.42□□□□□ -1.38
LRP6-201ENST00000261349 USP35Q9P2H5 1018 aa6.42□□□□□ -1.38
LRP6-201ENST00000261349 ANP32BQ92688 251 aaKnown RBP6.42□□□□□ -1.38
LRP6-201ENST00000261349 ARID3AQ99856 593 aa6.42□□□□□ -1.38
LRP6-201ENST00000261349 CANXP27824 592 aaKnown RBP6.41□□□□□ -1.38
LRP6-201ENST00000261349 BAZ1BQ9UIG0 1483 aaKnown RBP6.41□□□□□ -1.38
LRP6-201ENST00000261349 VPS8Q8N3P4 1428 aa6.4□□□□□ -1.38
LRP6-201ENST00000261349 L1TD1Q5T7N2 865 aaKnown RBP6.4□□□□□ -1.39
LRP6-201ENST00000261349 ABCC8Q09428 1581 aa6.39□□□□□ -1.39
LRP6-201ENST00000261349 TRIM44Q96DX7 344 aaPredicted RBP6.38□□□□□ -1.39
LRP6-201ENST00000261349 CEP164Q9UPV0 1460 aa6.38□□□□□ -1.39
LRP6-201ENST00000261349 BECN1Q14457 450 aa6.38□□□□□ -1.39
LRP6-201ENST00000261349 FRAT1Q92837 279 aaPredicted RBP6.38□□□□□ -1.39
LRP6-201ENST00000261349 SLC4A3P48751 1232 aa6.37□□□□□ -1.39
LRP6-201ENST00000261349 RGS3P49796 1198 aa6.37□□□□□ -1.39
LRP6-201ENST00000261349 CCDC88BA6NC98 1476 aa6.37□□□□□ -1.39
LRP6-201ENST00000261349 UPF2Q9HAU5 1272 aaKnown RBP6.37□□□□□ -1.39
LRP6-201ENST00000261349 AMER1Q5JTC6 1135 aaPredicted RBP6.37□□□□□ -1.39
LRP6-201ENST00000261349 CCNB3Q8WWL7 1395 aa6.35□□□□□ -1.39
LRP6-201ENST00000261349 TCERG1O14776 1098 aaKnown RBP6.35□□□□□ -1.39
LRP6-201ENST00000261349 TNNT2P45379 298 aaPredicted RBP6.35□□□□□ -1.39
LRP6-201ENST00000261349 FAM43AQ8N2R8 423 aa6.35□□□□□ -1.39
LRP6-201ENST00000261349 RAB3GAP2Q9H2M9 1393 aa6.35□□□□□ -1.39
LRP6-201ENST00000261349 SLC24A1O60721 1099 aa6.35□□□□□ -1.39
LRP6-201ENST00000261349 PDE4AP27815 886 aa6.34□□□□□ -1.39
LRP6-201ENST00000261349 SLKQ9H2G2 1235 aaPredicted RBP6.34□□□□□ -1.39
LRP6-201ENST00000261349 GZF1Q9H116 711 aaPredicted RBP6.34□□□□□ -1.39
LRP6-201ENST00000261349 TMC1Q8TDI8 760 aa6.34□□□□□ -1.39
LRP6-201ENST00000261349 GOLGA6L3A6NEY3 463 aa6.33□□□□□ -1.4
LRP6-201ENST00000261349 EIF4G2P78344 907 aaKnown RBP eCLIP6.33□□□□□ -1.4
LRP6-201ENST00000261349 ZMYND15Q9H091 742 aa6.33□□□□□ -1.4
LRP6-201ENST00000261349 PLEKHG5O94827 1062 aa6.33□□□□□ -1.4
LRP6-201ENST00000261349 KANK4Q5T7N3 995 aaPredicted RBP6.33□□□□□ -1.4
LRP6-201ENST00000261349 NFKBIBQ15653 356 aa6.33□□□□□ -1.4
LRP6-201ENST00000261349 SETD5Q9C0A6 1442 aa6.32□□□□□ -1.4
LRP6-201ENST00000261349 ZBED9Q6R2W3 1325 aa6.32□□□□□ -1.4
LRP6-201ENST00000261349 CDK11BP21127 795 aaKnown RBP6.32□□□□□ -1.4
LRP6-201ENST00000261349 SPRYD3Q8NCJ5 442 aa6.32□□□□□ -1.4
LRP6-201ENST00000261349 HSPA5P11021 654 aaKnown RBP6.32□□□□□ -1.4
LRP6-201ENST00000261349 NUDCQ9Y266 331 aa6.31□□□□□ -1.4
LRP6-201ENST00000261349 P3H3Q8IVL6 736 aa6.31□□□□□ -1.4
LRP6-201ENST00000261349 PPP1R15AO75807 674 aaPredicted RBP6.3□□□□□ -1.4
LRP6-201ENST00000261349 EXOC6Q8TAG9 804 aa6.29□□□□□ -1.4
LRP6-201ENST00000261349 FRAT2O75474 233 aaPredicted RBP6.29□□□□□ -1.4
LRP6-201ENST00000261349 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.29□□□□□ -1.4
LRP6-201ENST00000261349 ZBTB7CA1YPR0 619 aa6.28□□□□□ -1.4
LRP6-201ENST00000261349 AKNAQ7Z591 1439 aa6.28□□□□□ -1.4
LRP6-201ENST00000261349 RRP9O43818 475 aaKnown RBP6.28□□□□□ -1.4
LRP6-201ENST00000261349 MSNP26038 577 aaKnown RBP6.28□□□□□ -1.4
LRP6-201ENST00000261349 CHIC2Q9UKJ5 165 aa6.27□□□□□ -1.41
LRP6-201ENST00000261349 CECR2Q9BXF3 1484 aa6.27□□□□□ -1.41
LRP6-201ENST00000261349 PTMAP06454 111 aaKnown RBP6.27□□□□□ -1.41
LRP6-201ENST00000261349 NCLP19338 710 aaKnown RBP6.26□□□□□ -1.41
LRP6-201ENST00000261349 RCAN3Q9UKA8 241 aa6.26□□□□□ -1.41
LRP6-201ENST00000261349 C11orf95C9JLR9 678 aaPredicted RBP6.26□□□□□ -1.41
LRP6-201ENST00000261349 RRP1P56182 461 aaKnown RBP6.25□□□□□ -1.41
LRP6-201ENST00000261349 FAM13BQ9NYF5 915 aa6.25□□□□□ -1.41
LRP6-201ENST00000261349 GOLGA6L22H0YM25 854 aa6.25□□□□□ -1.41
LRP6-201ENST00000261349 MS4A1P11836 297 aa6.25□□□□□ -1.41
LRP6-201ENST00000261349 DNTTIP2Q5QJE6 756 aaKnown RBP6.25□□□□□ -1.41
LRP6-201ENST00000261349 WASHC2AQ641Q2 1341 aa6.24□□□□□ -1.41
LRP6-201ENST00000261349 RRP7BPQ9NSQ0 103 aa6.24□□□□□ -1.41
LRP6-201ENST00000261349 WDR97A6NE52 1622 aa6.24□□□□□ -1.41
LRP6-201ENST00000261349 RUSC2Q8N2Y8 1516 aa6.24□□□□□ -1.41
LRP6-201ENST00000261349 ARID3CA6NKF2 412 aa6.24□□□□□ -1.41
LRP6-201ENST00000261349 NACADO15069 1562 aa6.24□□□□□ -1.41
LRP6-201ENST00000261349 PRKRIP1Q9H875 184 aaPredicted RBP6.23□□□□□ -1.41
LRP6-201ENST00000261349 CNTLNQ9NXG0 1405 aa6.23□□□□□ -1.41
LRP6-201ENST00000261349 MROH2BQ7Z745 1585 aa6.23□□□□□ -1.41
LRP6-201ENST00000261349 POGKQ9P215 609 aa6.23□□□□□ -1.41
LRP6-201ENST00000261349 FAM161AQ3B820 660 aa6.22□□□□□ -1.41
LRP6-201ENST00000261349 HSCBQ8IWL3 235 aa6.22□□□□□ -1.41
LRP6-201ENST00000261349 PLIN1O60240 522 aa6.22□□□□□ -1.41
LRP6-201ENST00000261349 RAPGEF2Q9Y4G8 1499 aa6.21□□□□□ -1.41
LRP6-201ENST00000261349 RBM10P98175 930 aaKnown RBP6.21□□□□□ -1.42
LRP6-201ENST00000261349 TPM2P07951 284 aa6.21□□□□□ -1.42
LRP6-201ENST00000261349 WDR43Q15061 677 aaKnown RBP eCLIP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms