RNA–Protein interactions for RNA: ENST00000261318.4

C12orf49-201, Transcript of chromosome 12 open reading frame 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf49, Length 8,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-201ENST00000261318 ESF1Q9H501 851 aaKnown RBP19.66■□□□□ 0.74
C12orf49-201ENST00000261318 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.66■□□□□ 0.74
C12orf49-201ENST00000261318 GOLGA6L22H0YM25 854 aa19.63■□□□□ 0.73
C12orf49-201ENST00000261318 SUPT16HQ9Y5B9 1047 aaKnown RBP19.62■□□□□ 0.73
C12orf49-201ENST00000261318 NCLP19338 710 aaKnown RBP19.6■□□□□ 0.73
C12orf49-201ENST00000261318 PPM1GO15355 546 aaPredicted RBP19.59■□□□□ 0.73
C12orf49-201ENST00000261318 CEP162Q5TB80 1403 aa19.58■□□□□ 0.72
C12orf49-201ENST00000261318 TSPY4P0CV99 314 aa19.58■□□□□ 0.72
C12orf49-201ENST00000261318 TSPY10P0CW01 314 aa19.58■□□□□ 0.72
C12orf49-201ENST00000261318 GOLGA3Q08378 1498 aa19.57■□□□□ 0.72
C12orf49-201ENST00000261318 TNNT2P45379 298 aaPredicted RBP19.57■□□□□ 0.72
C12orf49-201ENST00000261318 ERICH6BQ5W0A0 696 aa19.56■□□□□ 0.72
C12orf49-201ENST00000261318 NOP58Q9Y2X3 529 aaKnown RBP19.52■□□□□ 0.72
C12orf49-201ENST00000261318 EEA1Q15075 1411 aa19.51■□□□□ 0.71
C12orf49-201ENST00000261318 PPP4R2Q9NY27 417 aa19.51■□□□□ 0.71
C12orf49-201ENST00000261318 RRP7BPQ9NSQ0 103 aa19.5■□□□□ 0.71
C12orf49-201ENST00000261318 PTMAP06454 111 aaKnown RBP19.48■□□□□ 0.71
C12orf49-201ENST00000261318 RSF1Q96T23 1441 aaPredicted RBP19.47■□□□□ 0.71
C12orf49-201ENST00000261318 LAS1LQ9Y4W2 734 aaKnown RBP19.46■□□□□ 0.71
C12orf49-201ENST00000261318 DNTTIP2Q5QJE6 756 aaKnown RBP19.46■□□□□ 0.71
C12orf49-201ENST00000261318 NAP1L5Q96NT1 182 aaPredicted RBP19.45■□□□□ 0.7
C12orf49-201ENST00000261318 RTN4Q9NQC3 1192 aaKnown RBP19.45■□□□□ 0.7
C12orf49-201ENST00000261318 CDK11BP21127 795 aaKnown RBP19.44■□□□□ 0.7
C12orf49-201ENST00000261318 CASC1Q6TDU7 716 aa19.44■□□□□ 0.7
C12orf49-201ENST00000261318 FTSJ3Q8IY81 847 aaKnown RBP19.42■□□□□ 0.7
C12orf49-201ENST00000261318 NPM1P06748 294 aaKnown RBP eCLIP19.4■□□□□ 0.7
C12orf49-201ENST00000261318 KNSTRNQ9Y448 316 aa19.39■□□□□ 0.69
C12orf49-201ENST00000261318 SENP3-EIF4A1A0A087X0R7 540 aa19.38■□□□□ 0.69
C12orf49-201ENST00000261318 ZRSR1Q15695 479 aaKnown RBP19.37■□□□□ 0.69
C12orf49-201ENST00000261318 CFAP53Q96M91 514 aa19.37■□□□□ 0.69
C12orf49-201ENST00000261318 CDCA8Q53HL2 280 aa19.37■□□□□ 0.69
C12orf49-201ENST00000261318 PLPPR3Q6T4P5 718 aa19.35■□□□□ 0.69
C12orf49-201ENST00000261318 RGS3P49796 1198 aa19.33■□□□□ 0.68
C12orf49-201ENST00000261318 B4GALNT3Q6L9W6 998 aa19.33■□□□□ 0.68
C12orf49-201ENST00000261318 CEP164Q9UPV0 1460 aa19.32■□□□□ 0.68
C12orf49-201ENST00000261318 TNIKQ9UKE5 1360 aa19.32■□□□□ 0.68
C12orf49-201ENST00000261318 CARD11Q9BXL7 1154 aa19.31■□□□□ 0.68
C12orf49-201ENST00000261318 RGL3Q3MIN7 710 aa19.3■□□□□ 0.68
C12orf49-201ENST00000261318 DEKP35659 375 aaKnown RBP19.29■□□□□ 0.68
C12orf49-201ENST00000261318 HSP90AB1P08238 724 aaKnown RBP19.28■□□□□ 0.68
C12orf49-201ENST00000261318 TPRNQ4KMQ1 711 aa19.27■□□□□ 0.68
C12orf49-201ENST00000261318 RBM19Q9Y4C8 960 aaKnown RBP19.25■□□□□ 0.67
C12orf49-201ENST00000261318 CHMP7Q8WUX9 453 aaPredicted RBP19.23■□□□□ 0.67
C12orf49-201ENST00000261318 WRNQ14191 1432 aaPredicted RBP eCLIP19.23■□□□□ 0.67
C12orf49-201ENST00000261318 SIN3AQ96ST3 1273 aa19.23■□□□□ 0.67
C12orf49-201ENST00000261318 L1TD1Q5T7N2 865 aaKnown RBP19.22■□□□□ 0.67
C12orf49-201ENST00000261318 FRAT1Q92837 279 aaPredicted RBP19.22■□□□□ 0.67
C12orf49-201ENST00000261318 NEUROD2Q15784 382 aa19.22■□□□□ 0.67
C12orf49-201ENST00000261318 CHMP4BQ9H444 224 aaKnown RBP19.21■□□□□ 0.67
C12orf49-201ENST00000261318 MAPK8IP3Q9UPT6 1336 aa19.21■□□□□ 0.67
C12orf49-201ENST00000261318 PLCB2Q00722 1185 aa19.2■□□□□ 0.66
C12orf49-201ENST00000261318 MS4A1P11836 297 aa19.2■□□□□ 0.66
C12orf49-201ENST00000261318 CCER2I3L3R5 266 aa19.19■□□□□ 0.66
C12orf49-201ENST00000261318 KIF27Q86VH2 1401 aa19.19■□□□□ 0.66
C12orf49-201ENST00000261318 GOLGA6L6A8MZA4 724 aa19.18■□□□□ 0.66
C12orf49-201ENST00000261318 RB1CC1Q8TDY2 1594 aa19.18■□□□□ 0.66
C12orf49-201ENST00000261318 HSCBQ8IWL3 235 aa19.18■□□□□ 0.66
C12orf49-201ENST00000261318 PLEKHD1A6NEE1 506 aa19.17■□□□□ 0.66
C12orf49-201ENST00000261318 MSNP26038 577 aaKnown RBP19.17■□□□□ 0.66
C12orf49-201ENST00000261318 C14orf37Q86TY3 774 aa19.17■□□□□ 0.66
C12orf49-201ENST00000261318 SENP3Q9H4L4 574 aaPredicted RBP19.17■□□□□ 0.66
C12orf49-201ENST00000261318 PPP1R15AO75807 674 aaPredicted RBP19.17■□□□□ 0.66
C12orf49-201ENST00000261318 ZBTB7CA1YPR0 619 aa19.16■□□□□ 0.66
C12orf49-201ENST00000261318 CCNB3Q8WWL7 1395 aa19.16■□□□□ 0.66
C12orf49-201ENST00000261318 CFDP1Q9UEE9 299 aaPredicted RBP19.16■□□□□ 0.66
C12orf49-201ENST00000261318 NUDCQ9Y266 331 aa19.16■□□□□ 0.66
C12orf49-201ENST00000261318 CC2D1BQ5T0F9 858 aaKnown RBP19.15■□□□□ 0.66
C12orf49-201ENST00000261318 CHAF1AQ13111 956 aaPredicted RBP19.15■□□□□ 0.66
C12orf49-201ENST00000261318 NRDCO43847 1150 aa19.11■□□□□ 0.65
C12orf49-201ENST00000261318 A0A0G2JS52 829 aa19.11■□□□□ 0.65
C12orf49-201ENST00000261318 KCNH8Q96L42 1107 aa19.09■□□□□ 0.65
C12orf49-201ENST00000261318 TIMELESSQ9UNS1 1208 aa19.09■□□□□ 0.65
C12orf49-201ENST00000261318 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.64
C12orf49-201ENST00000261318 PNNQ9H307 717 aaKnown RBP19.07■□□□□ 0.64
C12orf49-201ENST00000261318 PLEKHG5O94827 1062 aa19.06■□□□□ 0.64
C12orf49-201ENST00000261318 BAZ1BQ9UIG0 1483 aaKnown RBP19.06■□□□□ 0.64
C12orf49-201ENST00000261318 FGD1P98174 961 aa19.04■□□□□ 0.64
C12orf49-201ENST00000261318 TMF1P82094 1093 aa19.04■□□□□ 0.64
C12orf49-201ENST00000261318 SPRYD3Q8NCJ5 442 aa19.04■□□□□ 0.64
C12orf49-201ENST00000261318 KCNJ4P48050 445 aa19.03■□□□□ 0.64
C12orf49-201ENST00000261318 GOLGA6L4A6NEF3 574 aa19.03■□□□□ 0.64
C12orf49-201ENST00000261318 OS9Q13438 667 aaPredicted RBP19.02■□□□□ 0.64
C12orf49-201ENST00000261318 CFAP44Q96MT7 982 aa19.02■□□□□ 0.63
C12orf49-201ENST00000261318 U2SURPO15042 1029 aaKnown RBP19.01■□□□□ 0.63
C12orf49-201ENST00000261318 SETD5Q9C0A6 1442 aa19.01■□□□□ 0.63
C12orf49-201ENST00000261318 MCCP23508 829 aa19■□□□□ 0.63
C12orf49-201ENST00000261318 PTMSP20962 102 aa19■□□□□ 0.63
C12orf49-201ENST00000261318 DCAF11Q8TEB1 546 aa18.98■□□□□ 0.63
C12orf49-201ENST00000261318 DRC7Q8IY82 874 aa18.98■□□□□ 0.63
C12orf49-201ENST00000261318 TCERG1O14776 1098 aaKnown RBP18.97■□□□□ 0.63
C12orf49-201ENST00000261318 GBP4Q96PP9 640 aa18.97■□□□□ 0.63
C12orf49-201ENST00000261318 POGKQ9P215 609 aa18.97■□□□□ 0.63
C12orf49-201ENST00000261318 TSHZ2Q9NRE2 1034 aa18.96■□□□□ 0.63
C12orf49-201ENST00000261318 NACADO15069 1562 aa18.95■□□□□ 0.62
C12orf49-201ENST00000261318 TAOK2Q9UL54 1235 aa18.95■□□□□ 0.62
C12orf49-201ENST00000261318 NAP1L2Q9ULW6 460 aaPredicted RBP18.95■□□□□ 0.62
C12orf49-201ENST00000261318 KTN1Q86UP2 1357 aaKnown RBP18.95■□□□□ 0.62
C12orf49-201ENST00000261318 ARHGAP35Q9NRY4 1499 aa18.95■□□□□ 0.62
C12orf49-201ENST00000261318 ARID4BQ4LE39 1312 aaPredicted RBP18.95■□□□□ 0.62
C12orf49-201ENST00000261318 RCAN3Q9UKA8 241 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms