RNA–Protein interactions for RNA: ENST00000260270.2

FDX1-201, Transcript of ferredoxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FDX1, Length 3,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDX1-201ENST00000260270 LRRC9Q6ZRR7 1453 aa24.65■■□□□ 1.54
FDX1-201ENST00000260270 LRRIQ1Q96JM4 1722 aa24.63■■□□□ 1.53
FDX1-201ENST00000260270 URB2Q14146 1524 aaKnown RBP24.63■■□□□ 1.53
FDX1-201ENST00000260270 DHX57Q6P158 1386 aaKnown RBP24.63■■□□□ 1.53
FDX1-201ENST00000260270 FHAD1B1AJZ9 1412 aa24.62■■□□□ 1.53
FDX1-201ENST00000260270 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.53
FDX1-201ENST00000260270 NEUROD1Q13562 356 aa24.58■■□□□ 1.53
FDX1-201ENST00000260270 CASKIN1Q8WXD9 1431 aa24.56■■□□□ 1.52
FDX1-201ENST00000260270 GTF3C3Q9Y5Q9 886 aa24.54■■□□□ 1.52
FDX1-201ENST00000260270 CCNB3Q8WWL7 1395 aa24.53■■□□□ 1.52
FDX1-201ENST00000260270 PBRM1Q86U86 1689 aa24.52■■□□□ 1.52
FDX1-201ENST00000260270 MAPKBP1O60336 1514 aa24.51■■□□□ 1.51
FDX1-201ENST00000260270 ACIN1Q9UKV3 1341 aaKnown RBP24.5■■□□□ 1.51
FDX1-201ENST00000260270 ARHGEF11O15085 1522 aa24.49■■□□□ 1.51
FDX1-201ENST00000260270 MYT1Q01538 1121 aa24.49■■□□□ 1.51
FDX1-201ENST00000260270 KANK4Q5T7N3 995 aaPredicted RBP24.49■■□□□ 1.51
FDX1-201ENST00000260270 ZNF316A6NFI3 1004 aaPredicted RBP24.48■■□□□ 1.51
FDX1-201ENST00000260270 NESP48681 1621 aa24.46■■□□□ 1.51
FDX1-201ENST00000260270 RAD54L2Q9Y4B4 1467 aa24.46■■□□□ 1.51
FDX1-201ENST00000260270 DIEXFQ68CQ4 756 aaKnown RBP24.42■■□□□ 1.5
FDX1-201ENST00000260270 GRIN2BQ13224 1484 aa24.41■■□□□ 1.5
FDX1-201ENST00000260270 APLP2Q06481 763 aa24.41■■□□□ 1.5
FDX1-201ENST00000260270 ADAMTS12P58397 1594 aa24.37■■□□□ 1.49
FDX1-201ENST00000260270 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
FDX1-201ENST00000260270 FMN1Q68DA7 1419 aa24.34■■□□□ 1.49
FDX1-201ENST00000260270 PHLDB1Q86UU1 1377 aa24.32■■□□□ 1.48
FDX1-201ENST00000260270 GAPVD1Q14C86 1478 aa24.3■■□□□ 1.48
FDX1-201ENST00000260270 EHBP1L1Q8N3D4 1523 aa24.29■■□□□ 1.48
FDX1-201ENST00000260270 SUPT6HQ7KZ85 1726 aaKnown RBP24.27■■□□□ 1.48
FDX1-201ENST00000260270 GCC2Q8IWJ2 1684 aa24.27■■□□□ 1.48
FDX1-201ENST00000260270 WDR62O43379 1518 aa24.26■■□□□ 1.47
FDX1-201ENST00000260270 UGGT2Q9NYU1 1516 aa24.24■■□□□ 1.47
FDX1-201ENST00000260270 TCOF1Q13428 1488 aaKnown RBP24.24■■□□□ 1.47
FDX1-201ENST00000260270 CENPBP07199 599 aaPredicted RBP24.24■■□□□ 1.47
FDX1-201ENST00000260270 SETD5Q9C0A6 1442 aa24.23■■□□□ 1.47
FDX1-201ENST00000260270 HNRNPUL2Q1KMD3 747 aaKnown RBP24.22■■□□□ 1.47
FDX1-201ENST00000260270 CCDC18Q5T9S5 1454 aa24.21■■□□□ 1.47
FDX1-201ENST00000260270 YTHDC1Q96MU7 727 aaKnown RBP24.21■■□□□ 1.47
FDX1-201ENST00000260270 HECW1Q76N89 1606 aa24.2■■□□□ 1.46
FDX1-201ENST00000260270 FHOD3Q2V2M9 1422 aa24.2■■□□□ 1.46
FDX1-201ENST00000260270 RAB3GAP2Q9H2M9 1393 aa24.19■■□□□ 1.46
FDX1-201ENST00000260270 AKNAQ7Z591 1439 aa24.18■■□□□ 1.46
FDX1-201ENST00000260270 TTBK1Q5TCY1 1321 aaPredicted RBP24.18■■□□□ 1.46
FDX1-201ENST00000260270 IQGAP2Q13576 1575 aa24.17■■□□□ 1.46
FDX1-201ENST00000260270 PTPN23Q9H3S7 1636 aa24.17■■□□□ 1.46
FDX1-201ENST00000260270 MRC2Q9UBG0 1479 aa24.16■■□□□ 1.46
FDX1-201ENST00000260270 FGD6Q6ZV73 1430 aa24.15■■□□□ 1.46
FDX1-201ENST00000260270 MAGI3Q5TCQ9 1506 aa24.12■■□□□ 1.45
FDX1-201ENST00000260270 TIMELESSQ9UNS1 1208 aa24.12■■□□□ 1.45
FDX1-201ENST00000260270 HFM1A2PYH4 1435 aa24.11■■□□□ 1.45
FDX1-201ENST00000260270 KDM5BQ9UGL1 1544 aa24.07■■□□□ 1.44
FDX1-201ENST00000260270 MYOM3Q5VTT5 1437 aa24.04■■□□□ 1.44
FDX1-201ENST00000260270 IFT140Q96RY7 1462 aa24.04■■□□□ 1.44
FDX1-201ENST00000260270 NCOA2Q15596 1464 aa24.03■■□□□ 1.44
FDX1-201ENST00000260270 ADCY10Q96PN6 1610 aa24.03■■□□□ 1.44
FDX1-201ENST00000260270 KIAA0556O60303 1618 aa24.01■■□□□ 1.43
FDX1-201ENST00000260270 UACAQ9BZF9 1416 aa23.97■■□□□ 1.43
FDX1-201ENST00000260270 PTPRKQ15262 1439 aa23.95■■□□□ 1.43
FDX1-201ENST00000260270 MIA2Q96PC5 1412 aa23.95■■□□□ 1.43
FDX1-201ENST00000260270 EIF4G3O43432 1585 aaKnown RBP23.94■■□□□ 1.42
FDX1-201ENST00000260270 EPRSP07814 1512 aaKnown RBP23.93■■□□□ 1.42
FDX1-201ENST00000260270 NAIPQ13075 1403 aa23.92■■□□□ 1.42
FDX1-201ENST00000260270 DISP1Q96F81 1524 aa23.91■■□□□ 1.42
FDX1-201ENST00000260270 MIER1Q8N108 512 aa23.9■■□□□ 1.42
FDX1-201ENST00000260270 TDRD9Q8NDG6 1382 aaKnown RBP23.9■■□□□ 1.42
FDX1-201ENST00000260270 DNMT1P26358 1616 aaKnown RBP23.89■■□□□ 1.42
FDX1-201ENST00000260270 KIAA0586Q9BVV6 1533 aa23.89■■□□□ 1.42
FDX1-201ENST00000260270 CROCC2H7BZ55 1655 aa23.89■■□□□ 1.41
FDX1-201ENST00000260270 DENND4BO75064 1496 aaPredicted RBP23.89■■□□□ 1.41
FDX1-201ENST00000260270 RAPGEF6Q8TEU7 1601 aa23.87■■□□□ 1.41
FDX1-201ENST00000260270 POLR1AO95602 1720 aaPredicted RBP23.85■■□□□ 1.41
FDX1-201ENST00000260270 RANGAP1P46060 587 aaPredicted RBP23.84■■□□□ 1.41
FDX1-201ENST00000260270 MAGI1Q96QZ7 1491 aaPredicted RBP23.83■■□□□ 1.41
FDX1-201ENST00000260270 ADGBQ8N7X0 1667 aa23.83■■□□□ 1.41
FDX1-201ENST00000260270 ITSN2Q9NZM3 1697 aa23.81■■□□□ 1.4
FDX1-201ENST00000260270 GRIN2AQ12879 1464 aa23.79■■□□□ 1.4
FDX1-201ENST00000260270 ROCK1Q13464 1354 aa23.77■■□□□ 1.4
FDX1-201ENST00000260270 CEP170Q5SW79 1584 aa23.75■■□□□ 1.39
FDX1-201ENST00000260270 KDM6BO15054 1643 aa23.74■■□□□ 1.39
FDX1-201ENST00000260270 NUP153P49790 1475 aaKnown RBP23.74■■□□□ 1.39
FDX1-201ENST00000260270 MTUS2Q5JR59 1369 aa23.74■■□□□ 1.39
FDX1-201ENST00000260270 ZNF608Q9ULD9 1512 aaPredicted RBP23.71■■□□□ 1.39
FDX1-201ENST00000260270 NUP160Q12769 1436 aa23.7■■□□□ 1.39
FDX1-201ENST00000260270 CDK13Q14004 1512 aaKnown RBP23.68■■□□□ 1.38
FDX1-201ENST00000260270 ADGRL2O95490 1459 aa23.68■■□□□ 1.38
FDX1-201ENST00000260270 DNAJC5BQ9UF47 199 aa23.67■■□□□ 1.38
FDX1-201ENST00000260270 SYNJ2O15056 1496 aa23.66■■□□□ 1.38
FDX1-201ENST00000260270 ABCA8O94911 1581 aa23.65■■□□□ 1.38
FDX1-201ENST00000260270 PPP1R15AO75807 674 aaPredicted RBP23.63■■□□□ 1.37
FDX1-201ENST00000260270 KDM5DQ9BY66 1539 aa23.58■■□□□ 1.37
FDX1-201ENST00000260270 DAPK1P53355 1430 aa23.58■■□□□ 1.37
FDX1-201ENST00000260270 CDC42BPAQ5VT25 1732 aa23.58■■□□□ 1.37
FDX1-201ENST00000260270 SHANK2Q9UPX8 1470 aa23.56■■□□□ 1.36
FDX1-201ENST00000260270 SHROOM2Q13796 1616 aa23.55■■□□□ 1.36
FDX1-201ENST00000260270 P3H3Q8IVL6 736 aa23.54■■□□□ 1.36
FDX1-201ENST00000260270 TEX14Q8IWB6 1497 aa23.54■■□□□ 1.36
FDX1-201ENST00000260270 MBD5Q9P267 1494 aa23.53■■□□□ 1.36
FDX1-201ENST00000260270 ABCC5O15440 1437 aa23.51■■□□□ 1.35
FDX1-201ENST00000260270 FAM50AQ14320 339 aaKnown RBP23.51■■□□□ 1.35
FDX1-201ENST00000260270 TROQ12816 1431 aaPredicted RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms